RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 SPANXN2Q5MJ10 180 aa10.96□□□□□ -0.66
SNRNP200-201ENST00000323853 SCIMPQ6UWF3 145 aa10.96□□□□□ -0.66
SNRNP200-201ENST00000323853 C7orf26Q96N11 449 aa10.96□□□□□ -0.66
SNRNP200-201ENST00000323853 PLEKHG4BQ96PX9 1271 aa10.96□□□□□ -0.66
SNRNP200-201ENST00000323853 FTHL17Q9BXU8 183 aa10.96□□□□□ -0.66
SNRNP200-201ENST00000323853 B3GNT5Q9BYG0 378 aa10.96□□□□□ -0.66
SNRNP200-201ENST00000323853 ST6GALNAC4Q9H4F1 302 aa10.96□□□□□ -0.66
SNRNP200-201ENST00000323853 GLOD4Q9HC38 313 aa10.96□□□□□ -0.66
SNRNP200-201ENST00000323853 PCDH12Q9NPG4 1184 aa10.96□□□□□ -0.66
SNRNP200-201ENST00000323853 CORO1CQ9ULV4 474 aaPredicted RBP10.96□□□□□ -0.66
SNRNP200-201ENST00000323853 NCKAP1Q9Y2A7 1128 aa10.96□□□□□ -0.66
SNRNP200-201ENST00000323853 CTPS1P17812 591 aa10.95□□□□□ -0.66
SNRNP200-201ENST00000323853 HSPA14Q0VDF9 509 aa10.95□□□□□ -0.66
SNRNP200-201ENST00000323853 MZT2AQ6P582 158 aa10.95□□□□□ -0.66
SNRNP200-201ENST00000323853 ADAMTSL2Q86TH1 951 aa10.95□□□□□ -0.66
SNRNP200-201ENST00000323853 CD101Q93033 1021 aa10.95□□□□□ -0.66
SNRNP200-201ENST00000323853 HDAC10Q969S8 669 aa10.95□□□□□ -0.66
SNRNP200-201ENST00000323853 MAFBQ9Y5Q3 323 aaPredicted RBP10.95□□□□□ -0.66
SNRNP200-201ENST00000323853 AP4B1Q9Y6B7 739 aa10.95□□□□□ -0.66
SNRNP200-201ENST00000323853 DHRS12A0PJE2 317 aa10.95□□□□□ -0.66
SNRNP200-201ENST00000323853 PIPSLA2A3N6 862 aa10.95□□□□□ -0.66
SNRNP200-201ENST00000323853 GSC2O15499 205 aa10.95□□□□□ -0.66
SNRNP200-201ENST00000323853 UQCRBP14927 111 aa10.95□□□□□ -0.66
SNRNP200-201ENST00000323853 CHRNB2P17787 502 aa10.95□□□□□ -0.66
SNRNP200-201ENST00000323853 ZYG11AQ6WRX3 759 aa10.95□□□□□ -0.66
SNRNP200-201ENST00000323853 TRPM4Q8TD43 1214 aa10.95□□□□□ -0.66
SNRNP200-201ENST00000323853 ERLEC1Q96DZ1 483 aa10.95□□□□□ -0.66
SNRNP200-201ENST00000323853 TMEM109Q9BVC6 243 aa10.95□□□□□ -0.66
SNRNP200-201ENST00000323853 EPB41L4BQ9H329 900 aa10.95□□□□□ -0.66
SNRNP200-201ENST00000323853 RHOJQ9H4E5 214 aa10.95□□□□□ -0.66
SNRNP200-201ENST00000323853 A0A088AWK7 358 aa10.95□□□□□ -0.66
SNRNP200-201ENST00000323853 PGM3O95394 542 aa10.95□□□□□ -0.66
SNRNP200-201ENST00000323853 CSH1P0DML2 217 aa10.95□□□□□ -0.66
SNRNP200-201ENST00000323853 CSH2P0DML3 217 aa10.95□□□□□ -0.66
SNRNP200-201ENST00000323853 ZNF10P21506 573 aaPredicted RBP10.95□□□□□ -0.66
SNRNP200-201ENST00000323853 CXCR2P25025 360 aa10.95□□□□□ -0.66
SNRNP200-201ENST00000323853 RPL5P46777 297 aaKnown RBP10.95□□□□□ -0.66
SNRNP200-201ENST00000323853 ITGADQ13349 1161 aa10.95□□□□□ -0.66
SNRNP200-201ENST00000323853 ZNF618Q5T7W0 954 aa10.95□□□□□ -0.66
SNRNP200-201ENST00000323853 HECTD2Q5U5R9 776 aa10.95□□□□□ -0.66
SNRNP200-201ENST00000323853 OFCC1Q8IZS5 231 aa10.95□□□□□ -0.66
SNRNP200-201ENST00000323853 SLC4A11Q8NBS3 891 aa10.95□□□□□ -0.66
SNRNP200-201ENST00000323853 GSTCDQ8NEC7 633 aa10.95□□□□□ -0.66
SNRNP200-201ENST00000323853 OR4A15Q8NGL6 344 aa10.95□□□□□ -0.66
SNRNP200-201ENST00000323853 CENPIQ92674 756 aaPredicted RBP10.95□□□□□ -0.66
SNRNP200-201ENST00000323853 ZNF558Q96NG5 402 aa10.95□□□□□ -0.66
SNRNP200-201ENST00000323853 ZNF180Q9UJW8 692 aa10.95□□□□□ -0.66
SNRNP200-201ENST00000323853 VWA7Q9Y334 891 aa10.95□□□□□ -0.66
SNRNP200-201ENST00000323853 AHCYL1O43865 530 aa10.95□□□□□ -0.66
SNRNP200-201ENST00000323853 EPORP19235 508 aa10.95□□□□□ -0.66
SNRNP200-201ENST00000323853 DGCR6Q14129 220 aa10.95□□□□□ -0.66
SNRNP200-201ENST00000323853 SLC9A5Q14940 896 aa10.95□□□□□ -0.66
SNRNP200-201ENST00000323853 FCRL2Q96LA5 508 aaPredicted RBP10.95□□□□□ -0.66
SNRNP200-201ENST00000323853 SLITRK2Q9H156 845 aa10.95□□□□□ -0.66
SNRNP200-201ENST00000323853 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.95□□□□□ -0.666e-6■□□□□ 8.9
SNRNP200-201ENST00000323853 FBXO5Q9UKT4 447 aa10.95□□□□□ -0.66
SNRNP200-201ENST00000323853 SLC22A3O75751 556 aa10.95□□□□□ -0.66
SNRNP200-201ENST00000323853 RPP40O75818 363 aaKnown RBP10.95□□□□□ -0.66
SNRNP200-201ENST00000323853 RPL3P39023 403 aaKnown RBP10.95□□□□□ -0.66
SNRNP200-201ENST00000323853 ENPEPQ07075 957 aa10.95□□□□□ -0.66
SNRNP200-201ENST00000323853 RNASEH2BQ5TBB1 312 aaKnown RBP10.95□□□□□ -0.66
SNRNP200-201ENST00000323853 NEK10Q6ZWH5 1172 aa10.95□□□□□ -0.66
SNRNP200-201ENST00000323853 SLC26A9Q7LBE3 791 aa10.95□□□□□ -0.66
SNRNP200-201ENST00000323853 OTOP3Q7RTS5 596 aa10.95□□□□□ -0.66
SNRNP200-201ENST00000323853 CCDC28BQ9BUN5 200 aa10.95□□□□□ -0.66
SNRNP200-201ENST00000323853 C1QTNF7Q9BXJ2 289 aa10.95□□□□□ -0.66
SNRNP200-201ENST00000323853 SDCBP2Q9H190 292 aa10.95□□□□□ -0.66
SNRNP200-201ENST00000323853 BRD9Q9H8M2 597 aa10.95□□□□□ -0.66
SNRNP200-201ENST00000323853 IGLV3-22A0A075B6J6 115 aa10.94□□□□□ -0.66
SNRNP200-201ENST00000323853 ZNF37AP17032 561 aaPredicted RBP10.94□□□□□ -0.66
SNRNP200-201ENST00000323853 SLC20A2Q08357 652 aa10.94□□□□□ -0.66
SNRNP200-201ENST00000323853 TIMM50Q3ZCQ8 353 aa10.94□□□□□ -0.66
SNRNP200-201ENST00000323853 GJC2Q5T442 439 aaPredicted RBP10.94□□□□□ -0.66
SNRNP200-201ENST00000323853 KLHL17Q6TDP4 642 aa10.94□□□□□ -0.66
SNRNP200-201ENST00000323853 ECHDC2Q86YB7 292 aa10.94□□□□□ -0.66
SNRNP200-201ENST00000323853 HOPXQ9BPY8 73 aaPredicted RBP10.94□□□□□ -0.66
SNRNP200-201ENST00000323853 MAF1Q9H063 256 aa10.94□□□□□ -0.66
SNRNP200-201ENST00000323853 CLK4Q9HAZ1 481 aaKnown RBP10.94□□□□□ -0.66
SNRNP200-201ENST00000323853 VPS45Q9NRW7 570 aa10.94□□□□□ -0.66
SNRNP200-201ENST00000323853 DMTF1Q9Y222 760 aa10.94□□□□□ -0.66
SNRNP200-201ENST00000323853 WNT3AP56704 352 aa10.94□□□□□ -0.66
SNRNP200-201ENST00000323853 BNIP1Q12981 228 aa10.94□□□□□ -0.66
SNRNP200-201ENST00000323853 AMIGO2Q86SJ2 522 aa10.94□□□□□ -0.66
SNRNP200-201ENST00000323853 ZNF540Q8NDQ6 660 aa10.94□□□□□ -0.66
SNRNP200-201ENST00000323853 HSD3B7Q9H2F3 369 aa10.94□□□□□ -0.66
SNRNP200-201ENST00000323853 FAM105AQ9NUU6 356 aa10.94□□□□□ -0.66
SNRNP200-201ENST00000323853 EHD3Q9NZN3 535 aa10.94□□□□□ -0.66
SNRNP200-201ENST00000323853 TRAF6Q9Y4K3 522 aa10.94□□□□□ -0.66
SNRNP200-201ENST00000323853 QSOX1O00391 747 aa10.94□□□□□ -0.66
SNRNP200-201ENST00000323853 COL6A2P12110 1019 aa10.94□□□□□ -0.66
SNRNP200-201ENST00000323853 USP41Q3LFD5 358 aa10.94□□□□□ -0.66
SNRNP200-201ENST00000323853 SPESP1Q6UW49 350 aa10.94□□□□□ -0.66
SNRNP200-201ENST00000323853 TMC5Q6UXY8 1006 aa10.94□□□□□ -0.66
SNRNP200-201ENST00000323853 PLD5Q8N7P1 536 aa10.94□□□□□ -0.66
SNRNP200-201ENST00000323853 OR7A2PQ8NGA2 310 aa10.94□□□□□ -0.66
SNRNP200-201ENST00000323853 PTCD2Q8WV60 388 aaKnown RBP10.94□□□□□ -0.66
SNRNP200-201ENST00000323853 Q96MT0 163 aa10.94□□□□□ -0.66
SNRNP200-201ENST00000323853 OLFM1Q99784 485 aa10.94□□□□□ -0.66
SNRNP200-201ENST00000323853 DHX33Q9H6R0 707 aaKnown RBP10.94□□□□□ -0.66
SNRNP200-201ENST00000323853 CRNNQ9UBG3 495 aaPredicted RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms