RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 TNPO3Q9Y5L0 923 aaKnown RBP14.8□□□□□ -0.04
TCOF1-201ENST00000323668 SNX10Q9Y5X0 201 aa14.8□□□□□ -0.04
TCOF1-201ENST00000323668 CD3EAPO15446 510 aaKnown RBP14.8□□□□□ -0.04
TCOF1-201ENST00000323668 SEC22BO75396 215 aa14.8□□□□□ -0.04
TCOF1-201ENST00000323668 MMP3P08254 477 aa14.8□□□□□ -0.04
TCOF1-201ENST00000323668 ZNF7P17097 686 aaPredicted RBP14.8□□□□□ -0.04
TCOF1-201ENST00000323668 PSMB9P28065 219 aa14.8□□□□□ -0.04
TCOF1-201ENST00000323668 MAPK1P28482 360 aa14.8□□□□□ -0.04
TCOF1-201ENST00000323668 DEFA1P59665 94 aa14.8□□□□□ -0.04
TCOF1-201ENST00000323668 DEFA3P59666 94 aa14.8□□□□□ -0.04
TCOF1-201ENST00000323668 ATP6V0D1P61421 351 aa14.8□□□□□ -0.04
TCOF1-201ENST00000323668 NAA20P61599 178 aa14.8□□□□□ -0.04
TCOF1-201ENST00000323668 TBC1D21Q8IYX1 336 aa14.8□□□□□ -0.04
TCOF1-201ENST00000323668 AHI1Q8N157 1196 aa14.8□□□□□ -0.04
TCOF1-201ENST00000323668 FBXO30Q8TB52 745 aa14.8□□□□□ -0.04
TCOF1-201ENST00000323668 TEPSINQ96N21 525 aa14.8□□□□□ -0.04
TCOF1-201ENST00000323668 TBCDQ9BTW9 1192 aa14.8□□□□□ -0.04
TCOF1-201ENST00000323668 PIGVQ9NUD9 493 aa14.8□□□□□ -0.04
TCOF1-201ENST00000323668 TSC22D4Q9Y3Q8 395 aa14.8□□□□□ -0.04
TCOF1-201ENST00000323668 ONECUT3O60422 494 aaPredicted RBP14.79□□□□□ -0.04
TCOF1-201ENST00000323668 KRT8P05787 483 aa14.79□□□□□ -0.04
TCOF1-201ENST00000323668 GALK1P51570 392 aa14.79□□□□□ -0.04
TCOF1-201ENST00000323668 LPIN1Q14693 890 aa14.79□□□□□ -0.04
TCOF1-201ENST00000323668 ACAP2Q15057 778 aa14.79□□□□□ -0.04
TCOF1-201ENST00000323668 PGS1Q32NB8 556 aa14.79□□□□□ -0.04
TCOF1-201ENST00000323668 CYS1Q717R9 158 aa14.79□□□□□ -0.04
TCOF1-201ENST00000323668 CBR4Q8N4T8 237 aa14.79□□□□□ -0.04
TCOF1-201ENST00000323668 CDYL2Q8N8U2 506 aa14.79□□□□□ -0.04
TCOF1-201ENST00000323668 SENP6Q9GZR1 1112 aaPredicted RBP14.79□□□□□ -0.04
TCOF1-201ENST00000323668 NMRK2Q9NPI5 230 aa14.79□□□□□ -0.04
TCOF1-201ENST00000323668 FAM105AQ9NUU6 356 aa14.79□□□□□ -0.04
TCOF1-201ENST00000323668 A0A088AWK7 358 aa14.79□□□□□ -0.04
TCOF1-201ENST00000323668 KPNA4O00629 521 aaPredicted RBP14.79□□□□□ -0.04
TCOF1-201ENST00000323668 ITGB6P18564 788 aa14.79□□□□□ -0.04
TCOF1-201ENST00000323668 CYP3A5P20815 502 aa14.79□□□□□ -0.04
TCOF1-201ENST00000323668 IFNA8P32881 189 aa14.79□□□□□ -0.04
TCOF1-201ENST00000323668 RPL26P61254 145 aaKnown RBP14.79□□□□□ -0.04
TCOF1-201ENST00000323668 VPS26BQ4G0F5 336 aa14.79□□□□□ -0.04
TCOF1-201ENST00000323668 DGCR6LQ9BY27 220 aa14.79□□□□□ -0.04
TCOF1-201ENST00000323668 EXOSC4Q9NPD3 245 aaKnown RBP14.79□□□□□ -0.04
TCOF1-201ENST00000323668 IMPAD1Q9NX62 359 aa14.79□□□□□ -0.04
TCOF1-201ENST00000323668 VPS28Q9UK41 221 aa14.79□□□□□ -0.04
TCOF1-201ENST00000323668 ST3GAL5Q9UNP4 418 aa14.79□□□□□ -0.04
TCOF1-201ENST00000323668 MYBPHLA2RUH7 354 aa14.79□□□□□ -0.04
TCOF1-201ENST00000323668 MATN3O15232 486 aa14.79□□□□□ -0.04
TCOF1-201ENST00000323668 F7P08709 466 aaPredicted RBP14.79□□□□□ -0.04
TCOF1-201ENST00000323668 GHRHRQ02643 423 aa14.79□□□□□ -0.04
TCOF1-201ENST00000323668 CSTF3Q12996 717 aaKnown RBP14.79□□□□□ -0.04
TCOF1-201ENST00000323668 MTA1Q13330 715 aa14.79□□□□□ -0.04
TCOF1-201ENST00000323668 TIGD2Q4W5G0 525 aa14.79□□□□□ -0.04
TCOF1-201ENST00000323668 PCED1BQ96HM7 432 aa14.79□□□□□ -0.04
TCOF1-201ENST00000323668 DHRS4Q9BTZ2 278 aa14.79□□□□□ -0.04
TCOF1-201ENST00000323668 PCDHAC1Q9H158 963 aa14.79□□□□□ -0.04
TCOF1-201ENST00000323668 DAPK2Q9UIK4 370 aa14.79□□□□□ -0.04
TCOF1-201ENST00000323668 NEMP2A6NFY4 417 aa14.78□□□□□ -0.04
TCOF1-201ENST00000323668 GM2AP17900 193 aa14.78□□□□□ -0.04
TCOF1-201ENST00000323668 MTTPP55157 894 aa14.78□□□□□ -0.04
TCOF1-201ENST00000323668 TMEM63BQ5T3F8 832 aa14.78□□□□□ -0.04
TCOF1-201ENST00000323668 CASP10Q92851 521 aa14.78□□□□□ -0.04
TCOF1-201ENST00000323668 ADAM2Q99965 735 aa14.78□□□□□ -0.04
TCOF1-201ENST00000323668 PCDHB8Q9UN66 801 aa14.78□□□□□ -0.04
TCOF1-201ENST00000323668 MFHAS1Q9Y4C4 1052 aa14.78□□□□□ -0.04
TCOF1-201ENST00000323668 COL2A1P02458 1487 aaPredicted RBP14.78□□□□□ -0.04
TCOF1-201ENST00000323668 MATN2O00339 956 aa14.78□□□□□ -0.04
TCOF1-201ENST00000323668 MSI1O43347 362 aaKnown RBP14.78□□□□□ -0.04
TCOF1-201ENST00000323668 CYBBP04839 570 aa14.78□□□□□ -0.04
TCOF1-201ENST00000323668 HLA-DPA1P20036 260 aa14.78□□□□□ -0.04
TCOF1-201ENST00000323668 WARSP23381 471 aaKnown RBP14.78□□□□□ -0.04
TCOF1-201ENST00000323668 SH3D19Q5HYK7 790 aa14.78□□□□□ -0.04
TCOF1-201ENST00000323668 NOL9Q5SY16 702 aaKnown RBP14.78□□□□□ -0.04
TCOF1-201ENST00000323668 TMEM26Q6ZUK4 368 aa14.78□□□□□ -0.04
TCOF1-201ENST00000323668 ADHFE1Q8IWW8 467 aa14.78□□□□□ -0.04
TCOF1-201ENST00000323668 SETD9Q8NE22 299 aa14.78□□□□□ -0.04
TCOF1-201ENST00000323668 OR4L1Q8NH43 312 aa14.78□□□□□ -0.04
TCOF1-201ENST00000323668 ZMAT2Q96NC0 199 aaKnown RBP14.78□□□□□ -0.04
TCOF1-201ENST00000323668 INVSQ9Y283 1065 aa14.78□□□□□ -0.04
TCOF1-201ENST00000323668 STX16-NPEPL1H3BU86 382 aa14.78□□□□□ -0.04
TCOF1-201ENST00000323668 FAM189A1O60320 539 aa14.78□□□□□ -0.04
TCOF1-201ENST00000323668 SLC22A3O75751 556 aa14.78□□□□□ -0.04
TCOF1-201ENST00000323668 H6PDO95479 791 aa14.78□□□□□ -0.04
TCOF1-201ENST00000323668 FGF1P05230 155 aa14.78□□□□□ -0.04
TCOF1-201ENST00000323668 ZNF157P51786 506 aaPredicted RBP14.78□□□□□ -0.04
TCOF1-201ENST00000323668 HUNKP57058 714 aa14.78□□□□□ -0.04
TCOF1-201ENST00000323668 NADK2Q4G0N4 442 aa14.78□□□□□ -0.04
TCOF1-201ENST00000323668 GPRIN3Q6ZVF9 776 aa14.78□□□□□ -0.04
TCOF1-201ENST00000323668 LDB1Q86U70 411 aaPredicted RBP14.78□□□□□ -0.04
TCOF1-201ENST00000323668 TAC4Q86UU9 113 aa14.78□□□□□ -0.04
TCOF1-201ENST00000323668 ZC3HC1Q86WB0 502 aaKnown RBP14.78□□□□□ -0.04
TCOF1-201ENST00000323668 HS6ST3Q8IZP7 471 aa14.78□□□□□ -0.04
TCOF1-201ENST00000323668 PLEKHG4BQ96PX9 1271 aa14.78□□□□□ -0.04
TCOF1-201ENST00000323668 SPON1Q9HCB6 807 aa14.78□□□□□ -0.04
TCOF1-201ENST00000323668 ZFYVE28Q9HCC9 887 aa14.78□□□□□ -0.04
TCOF1-201ENST00000323668 C8orf4Q9NR00 106 aa14.78□□□□□ -0.04
TCOF1-201ENST00000323668 ZDHHC2Q9UIJ5 367 aa14.78□□□□□ -0.04
TCOF1-201ENST00000323668 TPRKBQ9Y3C4 175 aa14.78□□□□□ -0.04
TCOF1-201ENST00000323668 COPG1Q9Y678 874 aaKnown RBP14.78□□□□□ -0.04
TCOF1-201ENST00000323668 RGS14O43566 566 aa14.78□□□□□ -0.04
TCOF1-201ENST00000323668 ITGADQ13349 1161 aa14.78□□□□□ -0.04
TCOF1-201ENST00000323668 C9orf131Q5VYM1 1079 aa14.78□□□□□ -0.04
TCOF1-201ENST00000323668 FOPNLQ96NB1 174 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms