RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 WDR45BQ5MNZ6 344 aa9.77□□□□□ -0.85
COL12A1-201ENST00000322507 POF1BQ8WVV4 589 aa9.77□□□□□ -0.85
COL12A1-201ENST00000322507 DNAJA4Q8WW22 397 aaPredicted RBP9.77□□□□□ -0.85
COL12A1-201ENST00000322507 TMEM159Q96B96 161 aa9.77□□□□□ -0.85
COL12A1-201ENST00000322507 CRELD1Q96HD1 420 aa9.77□□□□□ -0.85
COL12A1-201ENST00000322507 FUT8Q9BYC5 575 aa9.77□□□□□ -0.85
COL12A1-201ENST00000322507 PADI4Q9UM07 663 aa9.77□□□□□ -0.85
COL12A1-201ENST00000322507 MAGEB3O15480 346 aa9.77□□□□□ -0.85
COL12A1-201ENST00000322507 METTL4Q8N3J2 472 aa9.77□□□□□ -0.85
COL12A1-201ENST00000322507 CDH9Q9ULB4 789 aa9.77□□□□□ -0.85
COL12A1-201ENST00000322507 ERGIC3Q9Y282 383 aa9.77□□□□□ -0.85
COL12A1-201ENST00000322507 DSG2Q14126 1118 aa9.76□□□□□ -0.85
COL12A1-201ENST00000322507 RAD9BQ6WBX8 426 aa9.76□□□□□ -0.85
COL12A1-201ENST00000322507 SLCO6A1Q86UG4 719 aa9.76□□□□□ -0.85
COL12A1-201ENST00000322507 GOLM1Q8NBJ4 401 aa9.76□□□□□ -0.85
COL12A1-201ENST00000322507 ME2P23368 584 aa9.76□□□□□ -0.85
COL12A1-201ENST00000322507 CYP24A1Q07973 514 aa9.76□□□□□ -0.85
COL12A1-201ENST00000322507 ZCCHC9Q8N567 271 aaKnown RBP9.76□□□□□ -0.85
COL12A1-201ENST00000322507 RDH11Q8TC12 318 aa9.76□□□□□ -0.85
COL12A1-201ENST00000322507 HTRA1Q92743 480 aa9.76□□□□□ -0.85
COL12A1-201ENST00000322507 FAM120BQ96EK7 910 aaKnown RBP9.76□□□□□ -0.85
COL12A1-201ENST00000322507 NSMCE3Q96MG7 304 aa9.76□□□□□ -0.85
COL12A1-201ENST00000322507 GPATCH1Q9BRR8 931 aaKnown RBP9.76□□□□□ -0.85
COL12A1-201ENST00000322507 A0A1B0GVC2 190 aa9.76□□□□□ -0.85
COL12A1-201ENST00000322507 ABHD2P08910 425 aa9.76□□□□□ -0.85
COL12A1-201ENST00000322507 CKBP12277 381 aa9.76□□□□□ -0.85
COL12A1-201ENST00000322507 EIF4BP23588 611 aaKnown RBP9.76□□□□□ -0.85
COL12A1-201ENST00000322507 GPR15P49685 360 aa9.76□□□□□ -0.85
COL12A1-201ENST00000322507 SLC45A4Q5BKX6 768 aa9.76□□□□□ -0.85
COL12A1-201ENST00000322507 TXNRD3Q86VQ6 643 aa9.76□□□□□ -0.85
COL12A1-201ENST00000322507 MOB1AQ9H8S9 216 aa9.76□□□□□ -0.85
COL12A1-201ENST00000322507 MYOZ2Q9NPC6 264 aa9.76□□□□□ -0.85
COL12A1-201ENST00000322507 CLN6Q9NWW5 311 aa9.76□□□□□ -0.85
COL12A1-201ENST00000322507 APOC4-APOC2K7ER74 178 aa9.76□□□□□ -0.85
COL12A1-201ENST00000322507 APOC2P02655 101 aa9.76□□□□□ -0.85
COL12A1-201ENST00000322507 PET100P0DJ07 73 aa9.76□□□□□ -0.85
COL12A1-201ENST00000322507 RAG1P15918 1043 aa9.76□□□□□ -0.85
COL12A1-201ENST00000322507 TCN1P20061 433 aaPredicted RBP9.76□□□□□ -0.85
COL12A1-201ENST00000322507 SLC1A6P48664 564 aa9.76□□□□□ -0.85
COL12A1-201ENST00000322507 GRB14Q14449 540 aa9.76□□□□□ -0.85
COL12A1-201ENST00000322507 PGBD3Q8N328 593 aa9.76□□□□□ -0.85
COL12A1-201ENST00000322507 CASKIN2Q8WXE0 1202 aa9.76□□□□□ -0.85
COL12A1-201ENST00000322507 PPP1R16AQ96I34 528 aa9.76□□□□□ -0.85
COL12A1-201ENST00000322507 NPHP3-ACAD11A0A0J9YXS1 232 aa9.76□□□□□ -0.85
COL12A1-201ENST00000322507 PLD2O14939 933 aa9.76□□□□□ -0.85
COL12A1-201ENST00000322507 URODP06132 367 aa9.76□□□□□ -0.85
COL12A1-201ENST00000322507 LYNP07948 512 aa9.76□□□□□ -0.85
COL12A1-201ENST00000322507 GNASQ5JWF2 1037 aa9.76□□□□□ -0.85
COL12A1-201ENST00000322507 MARC1Q5VT66 337 aa9.76□□□□□ -0.85
COL12A1-201ENST00000322507 LRRC38Q5VT99 294 aa9.76□□□□□ -0.85
COL12A1-201ENST00000322507 CDKAL1Q5VV42 579 aa9.76□□□□□ -0.85
COL12A1-201ENST00000322507 NUP54Q7Z3B4 507 aa9.76□□□□□ -0.85
COL12A1-201ENST00000322507 SKA3Q8IX90 412 aa9.76□□□□□ -0.85
COL12A1-201ENST00000322507 PPP3R2Q96LZ3 170 aa9.76□□□□□ -0.85
COL12A1-201ENST00000322507 PHF12Q96QT6 1004 aa9.76□□□□□ -0.85
COL12A1-201ENST00000322507 AP2A2O94973 939 aa9.76□□□□□ -0.85
COL12A1-201ENST00000322507 OR56A5P0C7T3 313 aa9.76□□□□□ -0.85
COL12A1-201ENST00000322507 ZNF267Q14586 743 aaPredicted RBP9.76□□□□□ -0.85
COL12A1-201ENST00000322507 C10orf53Q8N6V4 93 aa9.76□□□□□ -0.85
COL12A1-201ENST00000322507 RANBP3Q9H6Z4 567 aaPredicted RBP9.76□□□□□ -0.85
COL12A1-201ENST00000322507 PCDHB16Q9NRJ7 776 aa9.76□□□□□ -0.85
COL12A1-201ENST00000322507 PRDM4Q9UKN5 801 aa9.76□□□□□ -0.85
COL12A1-201ENST00000322507 ARHGAP23Q9P227 1491 aa9.76□□□□□ -0.85
COL12A1-201ENST00000322507 A0A075B6Q4 140 aa9.76□□□□□ -0.85
COL12A1-201ENST00000322507 PGRMC2O15173 223 aa9.76□□□□□ -0.85
COL12A1-201ENST00000322507 NFICP08651 508 aa9.76□□□□□ -0.85
COL12A1-201ENST00000322507 TROAPQ12815 778 aa9.76□□□□□ -0.85
COL12A1-201ENST00000322507 NR6A1Q15406 480 aa9.76□□□□□ -0.85
COL12A1-201ENST00000322507 TMEM53Q6P2H8 277 aa9.76□□□□□ -0.85
COL12A1-201ENST00000322507 TMEM120AQ9BXJ8 343 aa9.76□□□□□ -0.85
COL12A1-201ENST00000322507 ACTR8Q9H981 624 aa9.76□□□□□ -0.85
COL12A1-201ENST00000322507 PPP4R1LQ9P1A2 415 aa9.76□□□□□ -0.85
COL12A1-201ENST00000322507 PCDHA3Q9Y5H8 950 aa9.76□□□□□ -0.85
COL12A1-201ENST00000322507 SPTLC1O15269 473 aa9.76□□□□□ -0.85
COL12A1-201ENST00000322507 CAMTA2O94983 1202 aa9.76□□□□□ -0.85
COL12A1-201ENST00000322507 RLN1P04808 185 aa9.76□□□□□ -0.85
COL12A1-201ENST00000322507 PITPNAQ00169 270 aa9.76□□□□□ -0.85
COL12A1-201ENST00000322507 YIPF2Q9BWQ6 316 aa9.76□□□□□ -0.85
COL12A1-201ENST00000322507 ZMAT5Q9UDW3 170 aaKnown RBP9.76□□□□□ -0.85
COL12A1-201ENST00000322507 UMODL1Q5DID0 1318 aa9.76□□□□□ -0.85
COL12A1-201ENST00000322507 SLC35F4A4IF30 521 aa9.76□□□□□ -0.85
COL12A1-201ENST00000322507 CLDN25C9JDP6 229 aa9.76□□□□□ -0.85
COL12A1-201ENST00000322507 B3GAT3O94766 335 aa9.76□□□□□ -0.85
COL12A1-201ENST00000322507 MBP02144 154 aa9.76□□□□□ -0.85
COL12A1-201ENST00000322507 HK1P19367 917 aa9.76□□□□□ -0.85
COL12A1-201ENST00000322507 CHRNA6Q15825 494 aa9.76□□□□□ -0.85
COL12A1-201ENST00000322507 AKR1C8PQ5T2L2 129 aa9.76□□□□□ -0.85
COL12A1-201ENST00000322507 ZNF720Q7Z2F6 126 aa9.76□□□□□ -0.85
COL12A1-201ENST00000322507 ZNF548Q8NEK5 533 aaPredicted RBP9.76□□□□□ -0.85
COL12A1-201ENST00000322507 ZFP28Q8NHY6 868 aa9.76□□□□□ -0.85
COL12A1-201ENST00000322507 SLC22A4Q9H015 551 aa9.76□□□□□ -0.85
COL12A1-201ENST00000322507 REV1Q9UBZ9 1251 aa9.76□□□□□ -0.85
COL12A1-201ENST00000322507 PTPRMP28827 1452 aa9.76□□□□□ -0.85
COL12A1-201ENST00000322507 SALL1Q9NSC2 1324 aa9.75□□□□□ -0.85
COL12A1-201ENST00000322507 ARL5CA6NH57 179 aa9.75□□□□□ -0.85
COL12A1-201ENST00000322507 SLC9A3R1O14745 358 aaPredicted RBP9.75□□□□□ -0.85
COL12A1-201ENST00000322507 MAGEC1O60732 1142 aa9.75□□□□□ -0.85
COL12A1-201ENST00000322507 MLYCDO95822 493 aa9.75□□□□□ -0.85
COL12A1-201ENST00000322507 GSTM1P09488 218 aa9.75□□□□□ -0.85
COL12A1-201ENST00000322507 ST3GAL1Q11201 340 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms