RNA–Protein interactions for RNA: ENST00000321105.9

TOP3A-201, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,056 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-201ENST00000321105 GSC2O15499 205 aa11.05□□□□□ -0.64
TOP3A-201ENST00000321105 ABCB1P08183 1280 aaPredicted RBP11.05□□□□□ -0.64
TOP3A-201ENST00000321105 MLNP12872 115 aa11.05□□□□□ -0.64
TOP3A-201ENST00000321105 UGT1A6P19224 532 aa11.05□□□□□ -0.64
TOP3A-201ENST00000321105 UGT1A1P22309 533 aa11.05□□□□□ -0.64
TOP3A-201ENST00000321105 UGT1A4P22310 534 aa11.05□□□□□ -0.64
TOP3A-201ENST00000321105 CCNCP24863 283 aa11.05□□□□□ -0.64
TOP3A-201ENST00000321105 UGT1A3P35503 534 aa11.05□□□□□ -0.64
TOP3A-201ENST00000321105 UGT1A5P35504 534 aa11.05□□□□□ -0.64
TOP3A-201ENST00000321105 GGT5P36269 586 aa11.05□□□□□ -0.64
TOP3A-201ENST00000321105 CCNG1P51959 295 aa11.05□□□□□ -0.64
TOP3A-201ENST00000321105 PPIDQ08752 370 aaKnown RBP11.05□□□□□ -0.64
TOP3A-201ENST00000321105 RALGDSQ12967 914 aa11.05□□□□□ -0.64
TOP3A-201ENST00000321105 GTF2H3Q13889 308 aa11.05□□□□□ -0.64
TOP3A-201ENST00000321105 AP5B1Q2VPB7 878 aa11.05□□□□□ -0.64
TOP3A-201ENST00000321105 KHDC1Q4VXA5 237 aaKnown RBP11.05□□□□□ -0.64
TOP3A-201ENST00000321105 RTP2Q5QGT7 225 aa11.05□□□□□ -0.64
TOP3A-201ENST00000321105 GK5Q6ZS86 529 aa11.05□□□□□ -0.64
TOP3A-201ENST00000321105 C11orf74Q86VG3 221 aa11.05□□□□□ -0.64
TOP3A-201ENST00000321105 TRPV1Q8NER1 839 aa11.05□□□□□ -0.64
TOP3A-201ENST00000321105 CLHC1Q8NHS4 586 aa11.05□□□□□ -0.64
TOP3A-201ENST00000321105 SLC9A7Q96T83 725 aa11.05□□□□□ -0.64
TOP3A-201ENST00000321105 ACAT2Q9BWD1 397 aa11.05□□□□□ -0.64
TOP3A-201ENST00000321105 ASAH2Q9NR71 780 aa11.05□□□□□ -0.64
TOP3A-201ENST00000321105 FKBPLQ9UIM3 349 aa11.05□□□□□ -0.64
TOP3A-201ENST00000321105 SLC25A13Q9UJS0 675 aa11.05□□□□□ -0.64
TOP3A-201ENST00000321105 DTNAQ9Y4J8 743 aa11.05□□□□□ -0.64
TOP3A-201ENST00000321105 KANSL1LA0AUZ9 987 aa11.04□□□□□ -0.64
TOP3A-201ENST00000321105 TBC1D3BA6NDS4 549 aa11.04□□□□□ -0.64
TOP3A-201ENST00000321105 SLC38A8A6NNN8 435 aa11.04□□□□□ -0.64
TOP3A-201ENST00000321105 PSMD12O00232 456 aaPredicted RBP11.04□□□□□ -0.64
TOP3A-201ENST00000321105 SIN3BO75182 1162 aa11.04□□□□□ -0.64
TOP3A-201ENST00000321105 MTX2O75431 263 aa11.04□□□□□ -0.64
TOP3A-201ENST00000321105 GOT2P00505 430 aaKnown RBP11.04□□□□□ -0.64
TOP3A-201ENST00000321105 ALPIP09923 528 aa11.04□□□□□ -0.64
TOP3A-201ENST00000321105 ZNF7P17097 686 aaPredicted RBP11.04□□□□□ -0.64
TOP3A-201ENST00000321105 LRPAP1P30533 357 aa11.04□□□□□ -0.64
TOP3A-201ENST00000321105 GSSP48637 474 aa11.04□□□□□ -0.64
TOP3A-201ENST00000321105 CDK7P50613 346 aa11.04□□□□□ -0.64
TOP3A-201ENST00000321105 KIAA0319Q5VV43 1072 aa11.04□□□□□ -0.64
TOP3A-201ENST00000321105 LIPMQ5VYY2 423 aa11.04□□□□□ -0.64
TOP3A-201ENST00000321105 TRMT11Q7Z4G4 463 aaKnown RBP11.04□□□□□ -0.64
TOP3A-201ENST00000321105 DNAJB7Q7Z6W7 309 aaPredicted RBP11.04□□□□□ -0.64
TOP3A-201ENST00000321105 TDRPQ86YL5 185 aa11.04□□□□□ -0.64
TOP3A-201ENST00000321105 SYTL1Q8IYJ3 562 aa11.04□□□□□ -0.64
TOP3A-201ENST00000321105 FIBCD1Q8N539 461 aa11.04□□□□□ -0.64
TOP3A-201ENST00000321105 CCDC126Q96EE4 140 aa11.04□□□□□ -0.64
TOP3A-201ENST00000321105 LINGO1Q96FE5 620 aa11.04□□□□□ -0.64
TOP3A-201ENST00000321105 WDR41Q9HAD4 459 aa11.04□□□□□ -0.64
TOP3A-201ENST00000321105 VCX3AQ9NNX9 186 aa11.04□□□□□ -0.64
TOP3A-201ENST00000321105 MRPS23Q9Y3D9 190 aaKnown RBP11.04□□□□□ -0.64
TOP3A-201ENST00000321105 TCAF1Q9Y4C2 921 aa11.04□□□□□ -0.64
TOP3A-201ENST00000321105 UBXN8O00124 270 aa11.04□□□□□ -0.64
TOP3A-201ENST00000321105 TLL1O43897 1013 aa11.04□□□□□ -0.64
TOP3A-201ENST00000321105 SLC10A3P09131 477 aa11.04□□□□□ -0.64
TOP3A-201ENST00000321105 COX4I1P13073 169 aa11.04□□□□□ -0.64
TOP3A-201ENST00000321105 LPOP22079 712 aaPredicted RBP11.04□□□□□ -0.64
TOP3A-201ENST00000321105 TCEAL1Q15170 157 aa11.04□□□□□ -0.64
TOP3A-201ENST00000321105 TTLL9Q3SXZ7 439 aa11.04□□□□□ -0.64
TOP3A-201ENST00000321105 ATP6AP1LQ52LC2 224 aa11.04□□□□□ -0.64
TOP3A-201ENST00000321105 PAWRQ96IZ0 340 aaKnown RBP11.04□□□□□ -0.64
TOP3A-201ENST00000321105 ELOVL6Q9H5J4 265 aa11.04□□□□□ -0.64
TOP3A-201ENST00000321105 C15orf41Q9Y2V0 281 aa11.04□□□□□ -0.64
TOP3A-201ENST00000321105 MCM3APO60318 1980 aa11.04□□□□□ -0.64
TOP3A-201ENST00000321105 PER2O15055 1255 aa11.04□□□□□ -0.64
TOP3A-201ENST00000321105 EOMESO95936 686 aa11.04□□□□□ -0.64
TOP3A-201ENST00000321105 PSEN1P49768 467 aa11.04□□□□□ -0.64
TOP3A-201ENST00000321105 HNRNPDQ14103 355 aaKnown RBP11.04□□□□□ -0.64
TOP3A-201ENST00000321105 ACOX1Q15067 660 aa11.04□□□□□ -0.64
TOP3A-201ENST00000321105 TRIM60Q495X7 471 aa11.04□□□□□ -0.64
TOP3A-201ENST00000321105 AARS2Q5JTZ9 985 aaKnown RBP11.04□□□□□ -0.64
TOP3A-201ENST00000321105 STXBP5Q5T5C0 1151 aa11.04□□□□□ -0.64
TOP3A-201ENST00000321105 ULK2Q8IYT8 1036 aa11.04□□□□□ -0.64
TOP3A-201ENST00000321105 SLC25A51Q9H1U9 297 aa11.04□□□□□ -0.64
TOP3A-201ENST00000321105 ZDHHC4Q9NPG8 344 aa11.04□□□□□ -0.64
TOP3A-201ENST00000321105 SAR1AQ9NR31 198 aa11.04□□□□□ -0.64
TOP3A-201ENST00000321105 SPG21Q9NZD8 308 aa11.04□□□□□ -0.64
TOP3A-201ENST00000321105 PCDHGB4Q9UN71 923 aa11.04□□□□□ -0.64
TOP3A-201ENST00000321105 ZBTB14O43829 449 aa11.04□□□□□ -0.64
TOP3A-201ENST00000321105 SEC22BO75396 215 aa11.04□□□□□ -0.64
TOP3A-201ENST00000321105 CPSF4O95639 269 aaKnown RBP11.04□□□□□ -0.64
TOP3A-201ENST00000321105 EEF1DP29692 281 aaKnown RBP11.04□□□□□ -0.64
TOP3A-201ENST00000321105 HNF4AP41235 474 aa11.04□□□□□ -0.64
TOP3A-201ENST00000321105 MAP7Q14244 749 aa11.04□□□□□ -0.64
TOP3A-201ENST00000321105 ZNF284Q2VY69 593 aa11.04□□□□□ -0.64
TOP3A-201ENST00000321105 LRRC74BQ6ZQY2 392 aa11.04□□□□□ -0.64
TOP3A-201ENST00000321105 IFNLR1Q8IU57 520 aaPredicted RBP11.04□□□□□ -0.64
TOP3A-201ENST00000321105 TRAPPC5Q8IUR0 188 aa11.04□□□□□ -0.64
TOP3A-201ENST00000321105 IGSF8Q969P0 613 aa11.04□□□□□ -0.64
TOP3A-201ENST00000321105 FOPNLQ96NB1 174 aa11.04□□□□□ -0.64
TOP3A-201ENST00000321105 OXCT2Q9BYC2 517 aaPredicted RBP11.04□□□□□ -0.64
TOP3A-201ENST00000321105 CXorf56Q9H5V9 222 aa11.04□□□□□ -0.64
TOP3A-201ENST00000321105 RIC8BQ9NVN3 520 aa11.04□□□□□ -0.64
TOP3A-201ENST00000321105 IGSF9Q9P2J2 1179 aa11.04□□□□□ -0.64
TOP3A-201ENST00000321105 GIMAP2Q9UG22 337 aa11.04□□□□□ -0.64
TOP3A-201ENST00000321105 NPEPPSL1A6NEC2 478 aa11.03□□□□□ -0.64
TOP3A-201ENST00000321105 ZNF189O75820 626 aaPredicted RBP11.03□□□□□ -0.64
TOP3A-201ENST00000321105 SATB1Q01826 763 aa11.03□□□□□ -0.64
TOP3A-201ENST00000321105 TSNQ15631 228 aaKnown RBP11.03□□□□□ -0.64
TOP3A-201ENST00000321105 TBCCQ15814 346 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms