RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 Q8N9G6 341 aaPredicted RBP7.57□□□□□ -1.2
CDHR3-201ENST00000317716 OR2T34Q8NGX1 318 aa7.57□□□□□ -1.2
CDHR3-201ENST00000317716 OR2T3Q8NH03 318 aa7.57□□□□□ -1.2
CDHR3-201ENST00000317716 FAR1Q8WVX9 515 aa7.57□□□□□ -1.2
CDHR3-201ENST00000317716 HDAC10Q969S8 669 aa7.57□□□□□ -1.2
CDHR3-201ENST00000317716 PPP1R14BQ96C90 147 aa7.57□□□□□ -1.2
CDHR3-201ENST00000317716 KLHL32Q96NJ5 620 aa7.57□□□□□ -1.2
CDHR3-201ENST00000317716 PPP1R10Q96QC0 940 aaKnown RBP7.57□□□□□ -1.2
CDHR3-201ENST00000317716 ASPSCR1Q9BZE9 553 aa7.57□□□□□ -1.2
CDHR3-201ENST00000317716 C2orf40Q9H1Z8 148 aa7.57□□□□□ -1.2
CDHR3-201ENST00000317716 PARVBQ9HBI1 364 aa7.57□□□□□ -1.2
CDHR3-201ENST00000317716 OLA1Q9NTK5 396 aaKnown RBP7.57□□□□□ -1.2
CDHR3-201ENST00000317716 TBC1D13Q9NVG8 400 aa7.57□□□□□ -1.2
CDHR3-201ENST00000317716 RBM22Q9NW64 420 aaKnown RBP eCLIP7.57□□□□□ -1.2
CDHR3-201ENST00000317716 IFT80Q9P2H3 777 aaPredicted RBP7.57□□□□□ -1.2
CDHR3-201ENST00000317716 PRKAB1Q9Y478 270 aa7.57□□□□□ -1.2
CDHR3-201ENST00000317716 MYO7AQ13402 2215 aa7.56□□□□□ -1.2
CDHR3-201ENST00000317716 CCDC154A6NI56 674 aa7.56□□□□□ -1.2
CDHR3-201ENST00000317716 CAPN14A8MX76 684 aa7.56□□□□□ -1.2
CDHR3-201ENST00000317716 HNRNPCL2B2RXH8 293 aa7.56□□□□□ -1.2
CDHR3-201ENST00000317716 CCRL2O00421 344 aa7.56□□□□□ -1.2
CDHR3-201ENST00000317716 CLDN5O00501 218 aa7.56□□□□□ -1.2
CDHR3-201ENST00000317716 CXCL11O14625 94 aa7.56□□□□□ -1.2
CDHR3-201ENST00000317716 GABBR2O75899 941 aa7.56□□□□□ -1.2
CDHR3-201ENST00000317716 CHRM5P08912 532 aaPredicted RBP7.56□□□□□ -1.2
CDHR3-201ENST00000317716 IFI30P13284 250 aa7.56□□□□□ -1.2
CDHR3-201ENST00000317716 ERCC2P18074 760 aa7.56□□□□□ -1.2
CDHR3-201ENST00000317716 NMBRP28336 390 aa7.56□□□□□ -1.2
CDHR3-201ENST00000317716 RPS9P46781 194 aaKnown RBP7.56□□□□□ -1.2
CDHR3-201ENST00000317716 HSD17B4P51659 736 aa7.56□□□□□ -1.2
CDHR3-201ENST00000317716 MAXP61244 160 aa7.56□□□□□ -1.2
CDHR3-201ENST00000317716 SREBF2Q12772 1141 aa7.56□□□□□ -1.2
CDHR3-201ENST00000317716 LAPTM5Q13571 262 aa7.56□□□□□ -1.2
CDHR3-201ENST00000317716 DDX39BQ13838 428 aaKnown RBP7.56□□□□□ -1.2
CDHR3-201ENST00000317716 DGUOKQ16854 277 aa7.56□□□□□ -1.2
CDHR3-201ENST00000317716 SPANXN3Q5MJ09 141 aa7.56□□□□□ -1.2
CDHR3-201ENST00000317716 METTL21CQ5VZV1 264 aa7.56□□□□□ -1.2
CDHR3-201ENST00000317716 DRICH1Q6PGQ1 229 aaPredicted RBP7.56□□□□□ -1.2
CDHR3-201ENST00000317716 NAPRTQ6XQN6 538 aa7.56□□□□□ -1.2
CDHR3-201ENST00000317716 CATSPERGQ6ZRH7 1159 aa7.56□□□□□ -1.2
CDHR3-201ENST00000317716 NEK10Q6ZWH5 1172 aa7.56□□□□□ -1.2
CDHR3-201ENST00000317716 SLC15A4Q8N697 577 aa7.56□□□□□ -1.2
CDHR3-201ENST00000317716 OTULINQ96BN8 352 aa7.56□□□□□ -1.2
CDHR3-201ENST00000317716 CSPG4P5Q96PW8 444 aa7.56□□□□□ -1.2
CDHR3-201ENST00000317716 HAPLN3Q96S86 360 aa7.56□□□□□ -1.2
CDHR3-201ENST00000317716 TPK1Q9H3S4 243 aa7.56□□□□□ -1.2
CDHR3-201ENST00000317716 NT5MQ9NPB1 228 aa7.56□□□□□ -1.2
CDHR3-201ENST00000317716 ZMYM5Q9UJ78 669 aa7.56□□□□□ -1.2
CDHR3-201ENST00000317716 RNF112Q9ULX5 631 aa7.56□□□□□ -1.2
CDHR3-201ENST00000317716 PIN4Q9Y237 131 aaKnown RBP7.56□□□□□ -1.2
CDHR3-201ENST00000317716 CDK5RAP2Q96SN8 1893 aa7.56□□□□□ -1.2
CDHR3-201ENST00000317716 IGKV6D-41A0A0C4DH26 115 aa7.56□□□□□ -1.2
CDHR3-201ENST00000317716 CLDN25C9JDP6 229 aa7.56□□□□□ -1.2
CDHR3-201ENST00000317716 HCRTO43612 131 aa7.56□□□□□ -1.2
CDHR3-201ENST00000317716 GUCA1CO95843 209 aa7.56□□□□□ -1.2
CDHR3-201ENST00000317716 IDH2P48735 452 aaKnown RBP7.56□□□□□ -1.2
CDHR3-201ENST00000317716 NPY2RP49146 381 aa7.56□□□□□ -1.2
CDHR3-201ENST00000317716 POU4F1Q01851 419 aa7.56□□□□□ -1.2
CDHR3-201ENST00000317716 SLC25A11Q02978 314 aaKnown RBP7.56□□□□□ -1.2
CDHR3-201ENST00000317716 PRKCQQ04759 706 aa7.56□□□□□ -1.2
CDHR3-201ENST00000317716 LRRC74AQ0VAA2 488 aa7.56□□□□□ -1.2
CDHR3-201ENST00000317716 SLC13A2Q13183 592 aa7.56□□□□□ -1.2
CDHR3-201ENST00000317716 MAPRE1Q15691 268 aaKnown RBP7.56□□□□□ -1.2
CDHR3-201ENST00000317716 TAB1Q15750 504 aa7.56□□□□□ -1.2
CDHR3-201ENST00000317716 ZBED5Q49AG3 693 aa7.56□□□□□ -1.2
CDHR3-201ENST00000317716 CMPK2Q5EBM0 449 aa7.56□□□□□ -1.2
CDHR3-201ENST00000317716 PRR23CQ6ZRP0 262 aa7.56□□□□□ -1.2
CDHR3-201ENST00000317716 HORMAD1Q86X24 394 aa7.56□□□□□ -1.2
CDHR3-201ENST00000317716 CENPLQ8N0S6 344 aaPredicted RBP7.56□□□□□ -1.2
CDHR3-201ENST00000317716 ACMSDQ8TDX5 336 aa7.56□□□□□ -1.2
CDHR3-201ENST00000317716 BHMTQ93088 406 aa7.56□□□□□ -1.2
CDHR3-201ENST00000317716 ZHX1-C8orf76Q96EF9 292 aa7.56□□□□□ -1.2
CDHR3-201ENST00000317716 GLT1D1Q96MS3 346 aa7.56□□□□□ -1.2
CDHR3-201ENST00000317716 FTHL17Q9BXU8 183 aa7.56□□□□□ -1.2
CDHR3-201ENST00000317716 SMARCAD1Q9H4L7 1026 aa7.56□□□□□ -1.2
CDHR3-201ENST00000317716 WDCPQ9H6R7 721 aa7.56□□□□□ -1.2
CDHR3-201ENST00000317716 ARHGEF4Q9NR80 690 aa7.56□□□□□ -1.2
CDHR3-201ENST00000317716 BRCA2P51587 3418 aa7.56□□□□□ -1.2
CDHR3-201ENST00000317716 PNMA8CA0A1B0GUJ8 204 aa7.56□□□□□ -1.2
CDHR3-201ENST00000317716 TRIM64CA6NLI5 447 aa7.56□□□□□ -1.2
CDHR3-201ENST00000317716 AURKAO14965 403 aa7.56□□□□□ -1.2
CDHR3-201ENST00000317716 ZBTB24O43167 697 aaPredicted RBP7.56□□□□□ -1.2
CDHR3-201ENST00000317716 MT-CYBP00156 380 aaPredicted RBP7.56□□□□□ -1.2
CDHR3-201ENST00000317716 ZNF286BP0CG31 522 aa7.56□□□□□ -1.2
CDHR3-201ENST00000317716 PORP16435 677 aaPredicted RBP7.56□□□□□ -1.2
CDHR3-201ENST00000317716 TCEA1P23193 301 aaKnown RBP7.56□□□□□ -1.2
CDHR3-201ENST00000317716 CCR1P32246 355 aa7.56□□□□□ -1.2
CDHR3-201ENST00000317716 TRAF3Q13114 568 aa7.56□□□□□ -1.2
CDHR3-201ENST00000317716 ZNF846Q147U1 533 aa7.56□□□□□ -1.2
CDHR3-201ENST00000317716 RAB39AQ14964 217 aa7.56□□□□□ -1.2
CDHR3-201ENST00000317716 TAF12Q16514 161 aa7.56□□□□□ -1.2
CDHR3-201ENST00000317716 SYT16Q17RD7 645 aa7.56□□□□□ -1.2
CDHR3-201ENST00000317716 FAM98BQ52LJ0 330 aaKnown RBP7.56□□□□□ -1.2
CDHR3-201ENST00000317716 OGFRL1Q5TC84 451 aaPredicted RBP7.56□□□□□ -1.2
CDHR3-201ENST00000317716 TMEM236Q5W0B7 351 aa7.56□□□□□ -1.2
CDHR3-201ENST00000317716 KBTBD6Q86V97 674 aa7.56□□□□□ -1.2
CDHR3-201ENST00000317716 LILRA2Q8N149 483 aa7.56□□□□□ -1.2
CDHR3-201ENST00000317716 MCFD2Q8NI22 146 aa7.56□□□□□ -1.2
CDHR3-201ENST00000317716 HASPINQ8TF76 798 aa7.56□□□□□ -1.2
CDHR3-201ENST00000317716 OSCP1Q8WVF1 389 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms