RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 MPLP40238 635 aa7.91□□□□□ -1.14
CDC42-201ENST00000315554 KCNJ1P48048 391 aa7.91□□□□□ -1.14
CDC42-201ENST00000315554 GALNT3Q14435 633 aa7.91□□□□□ -1.14
CDC42-201ENST00000315554 GRM3Q14832 879 aa7.91□□□□□ -1.14
CDC42-201ENST00000315554 SF3A2Q15428 464 aaKnown RBP7.91□□□□□ -1.14
CDC42-201ENST00000315554 UGP2Q16851 508 aa7.91□□□□□ -1.14
CDC42-201ENST00000315554 ANKRD20A2Q5SQ80 823 aa7.91□□□□□ -1.14
CDC42-201ENST00000315554 SYCP2LQ5T4T6 812 aa7.91□□□□□ -1.14
CDC42-201ENST00000315554 ARMC12Q5T9G4 340 aa7.91□□□□□ -1.14
CDC42-201ENST00000315554 FAXCQ5TGI0 409 aa7.91□□□□□ -1.14
CDC42-201ENST00000315554 ANKRD20A1Q5TYW2 823 aa7.91□□□□□ -1.14
CDC42-201ENST00000315554 ANKRD20A3Q5VUR7 823 aa7.91□□□□□ -1.14
CDC42-201ENST00000315554 DENND2CQ68D51 928 aa7.91□□□□□ -1.14
CDC42-201ENST00000315554 ALG1LQ6GMV1 187 aa7.91□□□□□ -1.14
CDC42-201ENST00000315554 BRAT1Q6PJG6 821 aa7.91□□□□□ -1.14
CDC42-201ENST00000315554 BLOC1S3Q6QNY0 202 aa7.91□□□□□ -1.14
CDC42-201ENST00000315554 ALYREFQ86V81 257 aaKnown RBP7.91□□□□□ -1.14
CDC42-201ENST00000315554 CADM4Q8NFZ8 388 aa7.91□□□□□ -1.14
CDC42-201ENST00000315554 ECHDC3Q96DC8 303 aa7.91□□□□□ -1.14
CDC42-201ENST00000315554 IMP4Q96G21 291 aaKnown RBP7.91□□□□□ -1.14
CDC42-201ENST00000315554 SLC6A18Q96N87 628 aa7.91□□□□□ -1.14
CDC42-201ENST00000315554 NAPGQ99747 312 aaPredicted RBP7.91□□□□□ -1.14
CDC42-201ENST00000315554 TDRD1Q9BXT4 1180 aaKnown RBP7.91□□□□□ -1.14
CDC42-201ENST00000315554 SLC25A51Q9H1U9 297 aa7.91□□□□□ -1.14
CDC42-201ENST00000315554 USP29Q9HBJ7 922 aa7.91□□□□□ -1.14
CDC42-201ENST00000315554 PARD6AQ9NPB6 346 aa7.91□□□□□ -1.14
CDC42-201ENST00000315554 DKK3Q9UBP4 350 aa7.91□□□□□ -1.14
CDC42-201ENST00000315554 B4GALT6Q9UBX8 382 aa7.91□□□□□ -1.14
CDC42-201ENST00000315554 AMACRQ9UHK6 382 aa7.91□□□□□ -1.14
CDC42-201ENST00000315554 SNX12Q9UMY4 172 aa7.91□□□□□ -1.14
CDC42-201ENST00000315554 PLXND1Q9Y4D7 1925 aa7.91□□□□□ -1.14
CDC42-201ENST00000315554 TERTO14746 1132 aaKnown RBP7.9□□□□□ -1.14
CDC42-201ENST00000315554 AREL1O15033 823 aa7.9□□□□□ -1.14
CDC42-201ENST00000315554 RAD51BO15315 384 aa7.9□□□□□ -1.14
CDC42-201ENST00000315554 MTSS1O43312 755 aa7.9□□□□□ -1.14
CDC42-201ENST00000315554 S1PR4O95977 384 aa7.9□□□□□ -1.14
CDC42-201ENST00000315554 PRLP01236 227 aa7.9□□□□□ -1.14
CDC42-201ENST00000315554 IFNB1P01574 187 aa7.9□□□□□ -1.14
CDC42-201ENST00000315554 PIRTP0C851 137 aa7.9□□□□□ -1.14
CDC42-201ENST00000315554 ZSCAN5DPP0CG00 497 aa7.9□□□□□ -1.14
CDC42-201ENST00000315554 PSMB4P28070 264 aa7.9□□□□□ -1.14
CDC42-201ENST00000315554 TERF1P54274 439 aa7.9□□□□□ -1.14
CDC42-201ENST00000315554 EPHB1P54762 984 aa7.9□□□□□ -1.14
CDC42-201ENST00000315554 CCDC15Q0P6D6 951 aa7.9□□□□□ -1.14
CDC42-201ENST00000315554 OLIG2Q13516 323 aa7.9□□□□□ -1.14
CDC42-201ENST00000315554 FGL2Q14314 439 aa7.9□□□□□ -1.14
CDC42-201ENST00000315554 SPARCL1Q14515 664 aa7.9□□□□□ -1.14
CDC42-201ENST00000315554 ZNF284Q2VY69 593 aa7.9□□□□□ -1.14
CDC42-201ENST00000315554 WDR45BQ5MNZ6 344 aa7.9□□□□□ -1.14
CDC42-201ENST00000315554 ERAP2Q6P179 960 aa7.9□□□□□ -1.14
CDC42-201ENST00000315554 TSPAN33Q86UF1 283 aa7.9□□□□□ -1.14
CDC42-201ENST00000315554 HORMAD1Q86X24 394 aa7.9□□□□□ -1.14
CDC42-201ENST00000315554 RASGEF1CQ8N431 466 aa7.9□□□□□ -1.14
CDC42-201ENST00000315554 SLC25A41Q8N5S1 370 aa7.9□□□□□ -1.14
CDC42-201ENST00000315554 PRELID2Q8N945 189 aa7.9□□□□□ -1.14
CDC42-201ENST00000315554 GLIS1Q8NBF1 620 aa7.9□□□□□ -1.14
CDC42-201ENST00000315554 IPMKQ8NFU5 416 aa7.9□□□□□ -1.14
CDC42-201ENST00000315554 CXorf40AQ8TE69 158 aa7.9□□□□□ -1.14
CDC42-201ENST00000315554 PIH1D2Q8WWB5 315 aa7.9□□□□□ -1.14
CDC42-201ENST00000315554 FOXJ1Q92949 421 aa7.9□□□□□ -1.14
CDC42-201ENST00000315554 TRIM44Q96DX7 344 aaPredicted RBP7.9□□□□□ -1.14
CDC42-201ENST00000315554 OXNAD1Q96HP4 312 aaPredicted RBP7.9□□□□□ -1.14
CDC42-201ENST00000315554 FEM1CQ96JP0 617 aa7.9□□□□□ -1.14
CDC42-201ENST00000315554 PBKQ96KB5 322 aa7.9□□□□□ -1.14
CDC42-201ENST00000315554 SPATA13Q96N96 652 aa7.9□□□□□ -1.14
CDC42-201ENST00000315554 APOL2Q9BQE5 337 aa7.9□□□□□ -1.14
CDC42-201ENST00000315554 GORASP1Q9BQQ3 440 aa7.9□□□□□ -1.14
CDC42-201ENST00000315554 ORAI3Q9BRQ5 295 aa7.9□□□□□ -1.14
CDC42-201ENST00000315554 MLPHQ9BV36 600 aaPredicted RBP7.9□□□□□ -1.14
CDC42-201ENST00000315554 PCDH9Q9HC56 1237 aa7.9□□□□□ -1.14
CDC42-201ENST00000315554 PREBQ9HCU5 417 aa7.9□□□□□ -1.14
CDC42-201ENST00000315554 AASDHPPTQ9NRN7 309 aa7.9□□□□□ -1.14
CDC42-201ENST00000315554 HAUS2Q9NVX0 235 aa7.9□□□□□ -1.14
CDC42-201ENST00000315554 PILRBQ9UKJ0 227 aa7.9□□□□□ -1.14
CDC42-201ENST00000315554 ZNF148Q9UQR1 794 aa7.9□□□□□ -1.14
CDC42-201ENST00000315554 GON4LQ3T8J9 2241 aa7.9□□□□□ -1.15
CDC42-201ENST00000315554 A0A1W2PPC4 97 aa7.89□□□□□ -1.15
CDC42-201ENST00000315554 CTAGE9A4FU28 777 aa7.89□□□□□ -1.15
CDC42-201ENST00000315554 NPIPB15A6NHN6 443 aaPredicted RBP7.89□□□□□ -1.15
CDC42-201ENST00000315554 H0Y8X5 98 aa7.89□□□□□ -1.15
CDC42-201ENST00000315554 PGRMC1O00264 195 aaKnown RBP7.89□□□□□ -1.15
CDC42-201ENST00000315554 CLGNO14967 610 aa7.89□□□□□ -1.15
CDC42-201ENST00000315554 TSPAN6O43657 245 aa7.89□□□□□ -1.15
CDC42-201ENST00000315554 AP1G1O43747 822 aa7.89□□□□□ -1.15
CDC42-201ENST00000315554 FZD6O60353 706 aa7.89□□□□□ -1.15
CDC42-201ENST00000315554 SOCS5O75159 536 aa7.89□□□□□ -1.15
CDC42-201ENST00000315554 STK10O94804 968 aaKnown RBP7.89□□□□□ -1.15
CDC42-201ENST00000315554 METTL18O95568 372 aa7.89□□□□□ -1.15
CDC42-201ENST00000315554 PAK4O96013 591 aaPredicted RBP7.89□□□□□ -1.15
CDC42-201ENST00000315554 SLC4A1P02730 911 aa7.89□□□□□ -1.15
CDC42-201ENST00000315554 C6P13671 934 aa7.89□□□□□ -1.15
CDC42-201ENST00000315554 LHCGRP22888 699 aa7.89□□□□□ -1.15
CDC42-201ENST00000315554 CES1P23141 567 aa7.89□□□□□ -1.15
CDC42-201ENST00000315554 CD27P26842 260 aa7.89□□□□□ -1.15
CDC42-201ENST00000315554 HNF1BP35680 557 aa7.89□□□□□ -1.15
CDC42-201ENST00000315554 PLA2G5P39877 138 aa7.89□□□□□ -1.15
CDC42-201ENST00000315554 MMP12P39900 470 aa7.89□□□□□ -1.15
CDC42-201ENST00000315554 CHRNA4P43681 627 aa7.89□□□□□ -1.15
CDC42-201ENST00000315554 CSNK1EP49674 416 aaKnown RBP7.89□□□□□ -1.15
CDC42-201ENST00000315554 LIG3P49916 1009 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms