RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 ZRSR2Q15696 482 aaKnown RBP12.49□□□□□ -0.41
RNF4-201ENST00000314289 CFAP157Q5JU67 520 aa12.49□□□□□ -0.41
RNF4-201ENST00000314289 KIAA0930Q6ICG6 404 aaPredicted RBP12.49□□□□□ -0.41
RNF4-201ENST00000314289 LRRC8EQ6NSJ5 796 aa12.49□□□□□ -0.41
RNF4-201ENST00000314289 ANKRD33Q7Z3H0 272 aa12.49□□□□□ -0.41
RNF4-201ENST00000314289 TEX26Q8N6G2 289 aa12.49□□□□□ -0.41
RNF4-201ENST00000314289 RMDN1Q96DB5 314 aa12.49□□□□□ -0.41
RNF4-201ENST00000314289 TTLL2Q9BWV7 592 aa12.49□□□□□ -0.41
RNF4-201ENST00000314289 MUC3BQ9H195 1237 aa12.49□□□□□ -0.41
RNF4-201ENST00000314289 APOBEC2Q9Y235 224 aaKnown RBP12.49□□□□□ -0.41
RNF4-201ENST00000314289 A0A1B0GVG6 124 aa12.48□□□□□ -0.41
RNF4-201ENST00000314289 LDB2O43679 373 aa12.48□□□□□ -0.41
RNF4-201ENST00000314289 JUNP05412 331 aaKnown RBP12.48□□□□□ -0.41
RNF4-201ENST00000314289 MBL2P11226 248 aaPredicted RBP12.48□□□□□ -0.41
RNF4-201ENST00000314289 ARSAP15289 507 aa12.48□□□□□ -0.41
RNF4-201ENST00000314289 GRK2P25098 689 aa12.48□□□□□ -0.41
RNF4-201ENST00000314289 TUBB3Q13509 450 aa12.48□□□□□ -0.41
RNF4-201ENST00000314289 FRG1Q14331 258 aaKnown RBP12.48□□□□□ -0.41
RNF4-201ENST00000314289 ARL13AQ5H913 290 aaPredicted RBP12.48□□□□□ -0.41
RNF4-201ENST00000314289 DNAJB7Q7Z6W7 309 aaPredicted RBP12.48□□□□□ -0.41
RNF4-201ENST00000314289 CNTN4Q8IWV2 1026 aa12.48□□□□□ -0.41
RNF4-201ENST00000314289 KBTBD2Q8IY47 623 aa12.48□□□□□ -0.41
RNF4-201ENST00000314289 RYBPQ8N488 228 aaPredicted RBP12.48□□□□□ -0.41
RNF4-201ENST00000314289 ARL14EPQ8N8R7 260 aaPredicted RBP12.48□□□□□ -0.41
RNF4-201ENST00000314289 OR6K2Q8NGY2 324 aa12.48□□□□□ -0.41
RNF4-201ENST00000314289 RAB3IL1Q8TBN0 382 aa12.48□□□□□ -0.41
RNF4-201ENST00000314289 ANKRD49Q8WVL7 239 aa12.48□□□□□ -0.41
RNF4-201ENST00000314289 EXT2Q93063 718 aa12.48□□□□□ -0.41
RNF4-201ENST00000314289 OXSMQ9NWU1 459 aa12.48□□□□□ -0.41
RNF4-201ENST00000314289 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.48□□□□□ -0.411e-7■■□□□ 12.1
RNF4-201ENST00000314289 AFF4Q9UHB7 1163 aaKnown RBP12.48□□□□□ -0.41
RNF4-201ENST00000314289 CAPN14A8MX76 684 aa12.48□□□□□ -0.41
RNF4-201ENST00000314289 H3BNC9 293 aa12.48□□□□□ -0.41
RNF4-201ENST00000314289 DLX3O60479 287 aa12.48□□□□□ -0.41
RNF4-201ENST00000314289 RHOCP08134 193 aa12.48□□□□□ -0.41
RNF4-201ENST00000314289 HNRNPLP14866 589 aaKnown RBP eCLIP12.48□□□□□ -0.41
RNF4-201ENST00000314289 TSPAN8P19075 237 aa12.48□□□□□ -0.41
RNF4-201ENST00000314289 PGM1P36871 562 aa12.48□□□□□ -0.41
RNF4-201ENST00000314289 UGP2Q16851 508 aa12.48□□□□□ -0.41
RNF4-201ENST00000314289 RNF219Q5W0B1 726 aaPredicted RBP12.48□□□□□ -0.41
RNF4-201ENST00000314289 PHTF2Q8N3S3 785 aa12.48□□□□□ -0.41
RNF4-201ENST00000314289 CARNMT1Q8N4J0 409 aa12.48□□□□□ -0.41
RNF4-201ENST00000314289 TDRD5Q8NAT2 981 aaKnown RBP12.48□□□□□ -0.41
RNF4-201ENST00000314289 RBM15BQ8NDT2 890 aaKnown RBP12.48□□□□□ -0.41
RNF4-201ENST00000314289 GBP5Q96PP8 586 aa12.48□□□□□ -0.41
RNF4-201ENST00000314289 OR52B2Q96RD2 323 aa12.48□□□□□ -0.41
RNF4-201ENST00000314289 ZBED2Q9BTP6 218 aa12.48□□□□□ -0.41
RNF4-201ENST00000314289 PDFQ9HBH1 243 aa12.48□□□□□ -0.41
RNF4-201ENST00000314289 ZNF334Q9HCZ1 680 aaPredicted RBP12.48□□□□□ -0.41
RNF4-201ENST00000314289 VPS45Q9NRW7 570 aa12.48□□□□□ -0.41
RNF4-201ENST00000314289 SPO11Q9Y5K1 396 aa12.48□□□□□ -0.41
RNF4-201ENST00000314289 ZNF195O14628 629 aa12.48□□□□□ -0.41
RNF4-201ENST00000314289 HNRNPCL1O60812 293 aaKnown RBP12.48□□□□□ -0.41
RNF4-201ENST00000314289 PIGNO95427 931 aa12.48□□□□□ -0.41
RNF4-201ENST00000314289 SOD2P04179 222 aa12.48□□□□□ -0.41
RNF4-201ENST00000314289 CCDC166P0CW27 439 aa12.48□□□□□ -0.41
RNF4-201ENST00000314289 KCNA5P22460 613 aa12.48□□□□□ -0.41
RNF4-201ENST00000314289 EPHA3P29320 983 aa12.48□□□□□ -0.41
RNF4-201ENST00000314289 CDKN2DP55273 166 aa12.48□□□□□ -0.41
RNF4-201ENST00000314289 PRMT2P55345 433 aa12.48□□□□□ -0.41
RNF4-201ENST00000314289 OXCT1P55809 520 aa12.48□□□□□ -0.41
RNF4-201ENST00000314289 SMAD3P84022 425 aaKnown RBP12.48□□□□□ -0.41
RNF4-201ENST00000314289 SMARCB1Q12824 385 aa12.48□□□□□ -0.41
RNF4-201ENST00000314289 SEMA3AQ14563 771 aa12.48□□□□□ -0.41
RNF4-201ENST00000314289 PHF21BQ96EK2 531 aa12.48□□□□□ -0.41
RNF4-201ENST00000314289 MARK4Q96L34 752 aa12.48□□□□□ -0.41
RNF4-201ENST00000314289 GPR78Q96P69 363 aa12.48□□□□□ -0.41
RNF4-201ENST00000314289 CINPQ9BW66 212 aaPredicted RBP12.48□□□□□ -0.41
RNF4-201ENST00000314289 NUF2Q9BZD4 464 aa12.48□□□□□ -0.41
RNF4-201ENST00000314289 ARNT2Q9HBZ2 717 aa12.48□□□□□ -0.41
RNF4-201ENST00000314289 GPAMQ9HCL2 828 aa12.48□□□□□ -0.41
RNF4-201ENST00000314289 RPL26L1Q9UNX3 145 aaKnown RBP12.48□□□□□ -0.41
RNF4-201ENST00000314289 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.47□□□□□ -0.41
RNF4-201ENST00000314289 NRG2O14511 850 aaPredicted RBP12.47□□□□□ -0.41
RNF4-201ENST00000314289 GPR39O43194 453 aa12.47□□□□□ -0.41
RNF4-201ENST00000314289 DCXO43602 365 aa12.47□□□□□ -0.41
RNF4-201ENST00000314289 SIN3BO75182 1162 aa12.47□□□□□ -0.41
RNF4-201ENST00000314289 GOT2P00505 430 aaKnown RBP12.47□□□□□ -0.41
RNF4-201ENST00000314289 SERPINF2P08697 491 aa12.47□□□□□ -0.41
RNF4-201ENST00000314289 MZF1P28698 734 aaPredicted RBP12.47□□□□□ -0.41
RNF4-201ENST00000314289 MAPKAPK2P49137 400 aa12.47□□□□□ -0.41
RNF4-201ENST00000314289 YBEYP58557 167 aaPredicted RBP12.47□□□□□ -0.41
RNF4-201ENST00000314289 CYP4F8P98187 520 aa12.47□□□□□ -0.41
RNF4-201ENST00000314289 ZNF177Q13360 481 aaPredicted RBP12.47□□□□□ -0.41
RNF4-201ENST00000314289 SPDYAQ5MJ70 313 aa12.47□□□□□ -0.41
RNF4-201ENST00000314289 TMEM150AQ86TG1 271 aa12.47□□□□□ -0.41
RNF4-201ENST00000314289 CILP2Q8IUL8 1156 aa12.47□□□□□ -0.41
RNF4-201ENST00000314289 EFCAB3Q8N7B9 438 aa12.47□□□□□ -0.41
RNF4-201ENST00000314289 EFHBQ8N7U6 833 aa12.47□□□□□ -0.41
RNF4-201ENST00000314289 C2orf15Q8WU43 125 aaKnown RBP12.47□□□□□ -0.41
RNF4-201ENST00000314289 TOP1MTQ969P6 601 aa12.47□□□□□ -0.41
RNF4-201ENST00000314289 ZNF558Q96NG5 402 aa12.47□□□□□ -0.41
RNF4-201ENST00000314289 CCDC106Q9BWC9 280 aa12.47□□□□□ -0.41
RNF4-201ENST00000314289 PRKD2Q9BZL6 878 aa12.47□□□□□ -0.41
RNF4-201ENST00000314289 BPIFA1Q9NP55 256 aa12.47□□□□□ -0.41
RNF4-201ENST00000314289 NSMCE4AQ9NXX6 385 aa12.47□□□□□ -0.41
RNF4-201ENST00000314289 UBA2Q9UBT2 640 aaPredicted RBP12.47□□□□□ -0.41
RNF4-201ENST00000314289 ZDHHC2Q9UIJ5 367 aa12.47□□□□□ -0.41
RNF4-201ENST00000314289 PCDHB12Q9Y5F1 795 aa12.47□□□□□ -0.41
RNF4-201ENST00000314289 LOC285095A0A1B0GVY8 99 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms