RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 LRP8Q14114 963 aa25.44■■□□□ 1.66
HOXB3-201ENST00000311626 ARHGAP18Q8N392 663 aa25.44■■□□□ 1.66
HOXB3-201ENST00000311626 PGBD5Q8N414 524 aa25.44■■□□□ 1.66
HOXB3-201ENST00000311626 TTC9BQ8N6N2 239 aa25.44■■□□□ 1.66
HOXB3-201ENST00000311626 PTCD2Q8WV60 388 aaKnown RBP25.44■■□□□ 1.66
HOXB3-201ENST00000311626 PTERQ96BW5 349 aa25.44■■□□□ 1.66
HOXB3-201ENST00000311626 IMP4Q96G21 291 aaKnown RBP25.44■■□□□ 1.66
HOXB3-201ENST00000311626 TBATAQ96M53 351 aa25.44■■□□□ 1.66
HOXB3-201ENST00000311626 UXTQ9UBK9 157 aaPredicted RBP25.44■■□□□ 1.66
HOXB3-201ENST00000311626 CCDC160A6NGH7 325 aa25.44■■□□□ 1.66
HOXB3-201ENST00000311626 CYP11A1P05108 521 aa25.44■■□□□ 1.66
HOXB3-201ENST00000311626 TFAP2AP05549 437 aa25.44■■□□□ 1.66
HOXB3-201ENST00000311626 LEPRP48357 1165 aaKnown RBP25.44■■□□□ 1.66
HOXB3-201ENST00000311626 POLD2P49005 469 aa25.44■■□□□ 1.66
HOXB3-201ENST00000311626 SIRPB2Q5JXA9 342 aa25.44■■□□□ 1.66
HOXB3-201ENST00000311626 MARC1Q5VT66 337 aa25.44■■□□□ 1.66
HOXB3-201ENST00000311626 KLC3Q6P597 504 aa25.44■■□□□ 1.66
HOXB3-201ENST00000311626 MEAF6Q9HAF1 191 aa25.44■■□□□ 1.66
HOXB3-201ENST00000311626 DSEQ9UL01 958 aa25.44■■□□□ 1.66
HOXB3-201ENST00000311626 ACTL7AQ9Y615 435 aa25.44■■□□□ 1.66
HOXB3-201ENST00000311626 GPR182O15218 404 aa25.43■■□□□ 1.66
HOXB3-201ENST00000311626 PRAMEP78395 509 aa25.43■■□□□ 1.66
HOXB3-201ENST00000311626 AP1ARQ63HQ0 302 aa25.43■■□□□ 1.66
HOXB3-201ENST00000311626 RBM44Q6ZP01 1051 aaKnown RBP25.43■■□□□ 1.66
HOXB3-201ENST00000311626 CHSY3Q70JA7 882 aa25.43■■□□□ 1.66
HOXB3-201ENST00000311626 MRPL10Q7Z7H8 261 aaKnown RBP25.43■■□□□ 1.66
HOXB3-201ENST00000311626 IGSF8Q969P0 613 aa25.43■■□□□ 1.66
HOXB3-201ENST00000311626 PRKD2Q9BZL6 878 aa25.43■■□□□ 1.66
HOXB3-201ENST00000311626 SP110Q9HB58 689 aa25.43■■□□□ 1.66
HOXB3-201ENST00000311626 ARL5AQ9Y689 179 aa25.43■■□□□ 1.66
HOXB3-201ENST00000311626 M0QZQ0 153 aa25.43■■□□□ 1.66
HOXB3-201ENST00000311626 KIF3CO14782 793 aa25.43■■□□□ 1.66
HOXB3-201ENST00000311626 YWHAHQ04917 246 aaPredicted RBP25.43■■□□□ 1.66
HOXB3-201ENST00000311626 RFTN1Q14699 578 aaPredicted RBP25.43■■□□□ 1.66
HOXB3-201ENST00000311626 MGAT5BQ3V5L5 792 aa25.43■■□□□ 1.66
HOXB3-201ENST00000311626 ZNF280BQ86YH2 543 aa25.43■■□□□ 1.66
HOXB3-201ENST00000311626 C2orf69Q8N8R5 385 aa25.43■■□□□ 1.66
HOXB3-201ENST00000311626 EME1Q96AY2 570 aa25.43■■□□□ 1.66
HOXB3-201ENST00000311626 MTG1Q9BT17 334 aaPredicted RBP25.43■■□□□ 1.66
HOXB3-201ENST00000311626 COQ10BQ9H8M1 238 aa25.43■■□□□ 1.66
HOXB3-201ENST00000311626 S1PR4O95977 384 aa25.42■■□□□ 1.66
HOXB3-201ENST00000311626 CLPTM1O96005 669 aa25.42■■□□□ 1.66
HOXB3-201ENST00000311626 KPNA2P52292 529 aaKnown RBP25.42■■□□□ 1.66
HOXB3-201ENST00000311626 TUSC3Q13454 348 aa25.42■■□□□ 1.66
HOXB3-201ENST00000311626 TRIM25Q14258 630 aaKnown RBP25.42■■□□□ 1.66
HOXB3-201ENST00000311626 RBBP5Q15291 538 aaKnown RBP25.42■■□□□ 1.66
HOXB3-201ENST00000311626 RAP1GAP2Q684P5 730 aa25.42■■□□□ 1.66
HOXB3-201ENST00000311626 ADCY4Q8NFM4 1077 aa25.42■■□□□ 1.66
HOXB3-201ENST00000311626 BLOC1S5Q8TDH9 187 aa25.42■■□□□ 1.66
HOXB3-201ENST00000311626 MYEOVQ96EZ4 313 aa25.42■■□□□ 1.66
HOXB3-201ENST00000311626 UBXN10Q96LJ8 280 aa25.42■■□□□ 1.66
HOXB3-201ENST00000311626 TRIM8Q9BZR9 551 aa25.42■■□□□ 1.66
HOXB3-201ENST00000311626 GMIPQ9P107 970 aa25.42■■□□□ 1.66
HOXB3-201ENST00000311626 SNX13Q9Y5W8 968 aa25.42■■□□□ 1.66
HOXB3-201ENST00000311626 MIA3Q5JRA6 1907 aa25.42■■□□□ 1.66
HOXB3-201ENST00000311626 C7orf72A4D263 438 aa25.42■■□□□ 1.66
HOXB3-201ENST00000311626 MRASO14807 208 aa25.42■■□□□ 1.66
HOXB3-201ENST00000311626 CLCN5P51795 746 aa25.42■■□□□ 1.66
HOXB3-201ENST00000311626 YBX1P67809 324 aaKnown RBP25.42■■□□□ 1.66
HOXB3-201ENST00000311626 MGAT3Q09327 533 aa25.42■■□□□ 1.66
HOXB3-201ENST00000311626 SLC5A9Q2M3M2 681 aa25.42■■□□□ 1.66
HOXB3-201ENST00000311626 C11orf91Q3C1V1 193 aa25.42■■□□□ 1.66
HOXB3-201ENST00000311626 LARP7Q4G0J3 582 aaKnown RBP eCLIP25.42■■□□□ 1.66
HOXB3-201ENST00000311626 ISCA2Q86U28 154 aa25.42■■□□□ 1.66
HOXB3-201ENST00000311626 NSUN5Q96P11 429 aaKnown RBP25.42■■□□□ 1.66
HOXB3-201ENST00000311626 KCNA7Q96RP8 456 aa25.42■■□□□ 1.66
HOXB3-201ENST00000311626 EML4Q9HC35 981 aaKnown RBP25.42■■□□□ 1.66
HOXB3-201ENST00000311626 AP4S1Q9Y587 144 aa25.42■■□□□ 1.66
HOXB3-201ENST00000311626 HSPA1AP0DMV8 641 aaKnown RBP25.41■■□□□ 1.66
HOXB3-201ENST00000311626 HSPA1BP0DMV9 641 aaKnown RBP25.41■■□□□ 1.66
HOXB3-201ENST00000311626 GALNT3Q14435 633 aa25.41■■□□□ 1.66
HOXB3-201ENST00000311626 SQLEQ14534 574 aa25.41■■□□□ 1.66
HOXB3-201ENST00000311626 CYTH1Q15438 398 aa25.41■■□□□ 1.66
HOXB3-201ENST00000311626 NADK2Q4G0N4 442 aa25.41■■□□□ 1.66
HOXB3-201ENST00000311626 MS4A13Q5J8X5 152 aa25.41■■□□□ 1.66
HOXB3-201ENST00000311626 SLCO4A1Q96BD0 722 aa25.41■■□□□ 1.66
HOXB3-201ENST00000311626 SNRPB2P08579 225 aaKnown RBP25.41■■□□□ 1.66
HOXB3-201ENST00000311626 ALDOCP09972 364 aaKnown RBP25.41■■□□□ 1.66
HOXB3-201ENST00000311626 AKR1A1P14550 325 aa25.41■■□□□ 1.66
HOXB3-201ENST00000311626 DNAJB1P25685 340 aa25.41■■□□□ 1.66
HOXB3-201ENST00000311626 SOX11P35716 441 aa25.41■■□□□ 1.66
HOXB3-201ENST00000311626 RENBPP51606 427 aa25.41■■□□□ 1.66
HOXB3-201ENST00000311626 FOXA1P55317 472 aa25.41■■□□□ 1.66
HOXB3-201ENST00000311626 TBX4P57082 545 aa25.41■■□□□ 1.66
HOXB3-201ENST00000311626 UNC50Q53HI1 259 aa25.41■■□□□ 1.66
HOXB3-201ENST00000311626 SERINC5Q86VE9 423 aa25.41■■□□□ 1.66
HOXB3-201ENST00000311626 ASB9Q96DX5 294 aa25.41■■□□□ 1.66
HOXB3-201ENST00000311626 Q9H521 79 aa25.41■■□□□ 1.66
HOXB3-201ENST00000311626 RGS18Q9NS28 235 aa25.41■■□□□ 1.66
HOXB3-201ENST00000311626 BCAP29Q9UHQ4 241 aa25.41■■□□□ 1.66
HOXB3-201ENST00000311626 RAB26Q9ULW5 256 aa25.41■■□□□ 1.66
HOXB3-201ENST00000311626 FNDC1Q4ZHG4 1894 aaPredicted RBP25.41■■□□□ 1.66
HOXB3-201ENST00000311626 CTGFP29279 349 aa25.4■■□□□ 1.66
HOXB3-201ENST00000311626 ACVRL1P37023 503 aa25.4■■□□□ 1.66
HOXB3-201ENST00000311626 SEMA3AQ14563 771 aa25.4■■□□□ 1.66
HOXB3-201ENST00000311626 ZNF549Q6P9A3 640 aa25.4■■□□□ 1.66
HOXB3-201ENST00000311626 KLHDC9Q8NEP7 349 aa25.4■■□□□ 1.66
HOXB3-201ENST00000311626 DNAJC1Q96KC8 554 aaKnown RBP25.4■■□□□ 1.66
HOXB3-201ENST00000311626 PRICKLE1Q96MT3 831 aaPredicted RBP25.4■■□□□ 1.66
HOXB3-201ENST00000311626 UNC93B1Q9H1C4 597 aa25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms