RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 DAOAP59103 153 aa12.72□□□□□ -0.37
RETREG3-201ENST00000309428 ANGPTL8Q6UXH0 198 aa12.72□□□□□ -0.37
RETREG3-201ENST00000309428 NAPRTQ6XQN6 538 aa12.72□□□□□ -0.37
RETREG3-201ENST00000309428 USP50Q70EL3 339 aaPredicted RBP12.72□□□□□ -0.37
RETREG3-201ENST00000309428 C16orf59Q7L2K0 433 aa12.72□□□□□ -0.37
RETREG3-201ENST00000309428 UNC93AQ86WB7 457 aa12.72□□□□□ -0.37
RETREG3-201ENST00000309428 ADCY4Q8NFM4 1077 aa12.72□□□□□ -0.37
RETREG3-201ENST00000309428 CANT1Q8WVQ1 401 aa12.72□□□□□ -0.37
RETREG3-201ENST00000309428 CAPSLQ8WWF8 208 aa12.72□□□□□ -0.37
RETREG3-201ENST00000309428 CPNE1Q99829 537 aa12.72□□□□□ -0.37
RETREG3-201ENST00000309428 THUMPD3Q9BV44 507 aaKnown RBP12.72□□□□□ -0.37
RETREG3-201ENST00000309428 CDC14AQ9UNH5 594 aa12.72□□□□□ -0.37
RETREG3-201ENST00000309428 SUPT3HB4E1H0 165 aa12.72□□□□□ -0.37
RETREG3-201ENST00000309428 TRIM38O00635 465 aa12.72□□□□□ -0.37
RETREG3-201ENST00000309428 RNASEH2AO75792 299 aaKnown RBP12.72□□□□□ -0.37
RETREG3-201ENST00000309428 PAMP19021 973 aa12.72□□□□□ -0.37
RETREG3-201ENST00000309428 PCSK1P29120 753 aa12.72□□□□□ -0.37
RETREG3-201ENST00000309428 PNPLA4P41247 253 aa12.72□□□□□ -0.37
RETREG3-201ENST00000309428 MAGEA10P43363 369 aaPredicted RBP12.72□□□□□ -0.37
RETREG3-201ENST00000309428 MSLNQ13421 630 aaPredicted RBP12.72□□□□□ -0.37
RETREG3-201ENST00000309428 SEMA5AQ13591 1074 aa12.72□□□□□ -0.37
RETREG3-201ENST00000309428 POLD3Q15054 466 aaPredicted RBP12.72□□□□□ -0.37
RETREG3-201ENST00000309428 RBBP7Q16576 425 aa12.72□□□□□ -0.37
RETREG3-201ENST00000309428 MAMDC4Q6UXC1 1216 aa12.72□□□□□ -0.37
RETREG3-201ENST00000309428 RNF19BQ6ZMZ0 732 aa12.72□□□□□ -0.37
RETREG3-201ENST00000309428 ZCCHC7Q8N3Z6 543 aaKnown RBP12.72□□□□□ -0.37
RETREG3-201ENST00000309428 RP9Q8TA86 221 aaKnown RBP12.72□□□□□ -0.37
RETREG3-201ENST00000309428 LRRC39Q96DD0 335 aa12.72□□□□□ -0.37
RETREG3-201ENST00000309428 TBCDQ9BTW9 1192 aa12.72□□□□□ -0.37
RETREG3-201ENST00000309428 ROGDIQ9GZN7 287 aa12.72□□□□□ -0.37
RETREG3-201ENST00000309428 ALG9Q9H6U8 611 aa12.72□□□□□ -0.37
RETREG3-201ENST00000309428 WDR70Q9NW82 654 aa12.72□□□□□ -0.37
RETREG3-201ENST00000309428 UBAP1Q9NZ09 502 aa12.72□□□□□ -0.37
RETREG3-201ENST00000309428 EFR3BQ9Y2G0 817 aa12.72□□□□□ -0.37
RETREG3-201ENST00000309428 U3KQV3 271 aa12.72□□□□□ -0.37
RETREG3-201ENST00000309428 PABPN1LA6NDY0 278 aaKnown RBP12.72□□□□□ -0.37
RETREG3-201ENST00000309428 MOXD2PA6NHM9 499 aa12.72□□□□□ -0.37
RETREG3-201ENST00000309428 E7ESA3 106 aa12.72□□□□□ -0.37
RETREG3-201ENST00000309428 PRSS56P0CW18 603 aa12.72□□□□□ -0.37
RETREG3-201ENST00000309428 FGF3P11487 239 aaPredicted RBP12.72□□□□□ -0.37
RETREG3-201ENST00000309428 PSMB9P28065 219 aa12.72□□□□□ -0.37
RETREG3-201ENST00000309428 SERPINB1P30740 379 aa12.72□□□□□ -0.37
RETREG3-201ENST00000309428 CLK1P49759 484 aaKnown RBP12.72□□□□□ -0.37
RETREG3-201ENST00000309428 MS4A2Q01362 244 aa12.72□□□□□ -0.37
RETREG3-201ENST00000309428 DSC2Q02487 901 aa12.72□□□□□ -0.37
RETREG3-201ENST00000309428 PCLAFQ15004 111 aa12.72□□□□□ -0.37
RETREG3-201ENST00000309428 GRTP1Q5TC63 336 aa12.72□□□□□ -0.37
RETREG3-201ENST00000309428 FAM171A1Q5VUB5 890 aa12.72□□□□□ -0.37
RETREG3-201ENST00000309428 SPRYD7Q5W111 196 aa12.72□□□□□ -0.37
RETREG3-201ENST00000309428 C14orf80Q86SX3 495 aa12.72□□□□□ -0.37
RETREG3-201ENST00000309428 LRRTM3Q86VH5 581 aa12.72□□□□□ -0.37
RETREG3-201ENST00000309428 THEM5Q8N1Q8 247 aa12.72□□□□□ -0.37
RETREG3-201ENST00000309428 HSFY1Q96LI6 401 aa12.72□□□□□ -0.37
RETREG3-201ENST00000309428 EML4Q9HC35 981 aaKnown RBP12.72□□□□□ -0.37
RETREG3-201ENST00000309428 PNPLA3Q9NST1 481 aa12.72□□□□□ -0.37
RETREG3-201ENST00000309428 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.72□□□□□ -0.37
RETREG3-201ENST00000309428 COQ6Q9Y2Z9 468 aa12.72□□□□□ -0.37
RETREG3-201ENST00000309428 RAP2CQ9Y3L5 183 aa12.72□□□□□ -0.37
RETREG3-201ENST00000309428 GLTPD2A6NH11 291 aa12.71□□□□□ -0.37
RETREG3-201ENST00000309428 E7ENX8 843 aa12.71□□□□□ -0.37
RETREG3-201ENST00000309428 JUNP05412 331 aaKnown RBP12.71□□□□□ -0.37
RETREG3-201ENST00000309428 TFAP2AP05549 437 aa12.71□□□□□ -0.37
RETREG3-201ENST00000309428 CDKL1Q00532 357 aa12.71□□□□□ -0.37
RETREG3-201ENST00000309428 CEACAM7Q14002 265 aa12.71□□□□□ -0.37
RETREG3-201ENST00000309428 PTPRRQ15256 657 aa12.71□□□□□ -0.37
RETREG3-201ENST00000309428 RGS21Q2M5E4 152 aa12.71□□□□□ -0.37
RETREG3-201ENST00000309428 ZNF789Q5FWF6 425 aa12.71□□□□□ -0.37
RETREG3-201ENST00000309428 RBM20Q5T481 1227 aaKnown RBP12.71□□□□□ -0.37
RETREG3-201ENST00000309428 MBLAC2Q68D91 279 aa12.71□□□□□ -0.37
RETREG3-201ENST00000309428 PAQR9Q6ZVX9 377 aa12.71□□□□□ -0.37
RETREG3-201ENST00000309428 DEFB128Q7Z7B8 93 aa12.71□□□□□ -0.37
RETREG3-201ENST00000309428 PIM3Q86V86 326 aa12.71□□□□□ -0.37
RETREG3-201ENST00000309428 RELL1Q8IUW5 271 aa12.71□□□□□ -0.37
RETREG3-201ENST00000309428 CCDC103Q8IW40 242 aa12.71□□□□□ -0.37
RETREG3-201ENST00000309428 TTC39CQ8N584 583 aa12.71□□□□□ -0.37
RETREG3-201ENST00000309428 PPHLN1Q8NEY8 458 aaKnown RBP12.71□□□□□ -0.37
RETREG3-201ENST00000309428 AFF4Q9UHB7 1163 aaKnown RBP12.71□□□□□ -0.37
RETREG3-201ENST00000309428 IPO11Q9UI26 975 aaKnown RBP12.71□□□□□ -0.37
RETREG3-201ENST00000309428 GABRQQ9UN88 632 aa12.71□□□□□ -0.37
RETREG3-201ENST00000309428 ZNF831Q5JPB2 1677 aa12.71□□□□□ -0.37
RETREG3-201ENST00000309428 FAM95CA0A1B0GW59 222 aa12.71□□□□□ -0.37
RETREG3-201ENST00000309428 SH3BP5O60239 455 aa12.71□□□□□ -0.37
RETREG3-201ENST00000309428 CHEK2O96017 543 aa12.71□□□□□ -0.37
RETREG3-201ENST00000309428 HSPA1AP0DMV8 641 aaKnown RBP12.71□□□□□ -0.37
RETREG3-201ENST00000309428 HSPA1BP0DMV9 641 aaKnown RBP12.71□□□□□ -0.37
RETREG3-201ENST00000309428 UBE3AQ05086 875 aa12.71□□□□□ -0.37
RETREG3-201ENST00000309428 MADCAM1Q13477 382 aa12.71□□□□□ -0.37
RETREG3-201ENST00000309428 ITGA7Q13683 1181 aa12.71□□□□□ -0.37
RETREG3-201ENST00000309428 KYAT1Q16773 422 aa12.71□□□□□ -0.37
RETREG3-201ENST00000309428 VPS26BQ4G0F5 336 aa12.71□□□□□ -0.37
RETREG3-201ENST00000309428 KIAA1841Q6NSI8 718 aa12.71□□□□□ -0.37
RETREG3-201ENST00000309428 CNSTQ6PJW8 725 aa12.71□□□□□ -0.37
RETREG3-201ENST00000309428 POTEHQ6S545 545 aa12.71□□□□□ -0.37
RETREG3-201ENST00000309428 ZNF280BQ86YH2 543 aa12.71□□□□□ -0.37
RETREG3-201ENST00000309428 PLD3Q8IV08 490 aa12.71□□□□□ -0.37
RETREG3-201ENST00000309428 IFT43Q96FT9 208 aa12.71□□□□□ -0.37
RETREG3-201ENST00000309428 NAT9Q9BTE0 207 aa12.71□□□□□ -0.37
RETREG3-201ENST00000309428 EPS8L2Q9H6S3 715 aa12.71□□□□□ -0.37
RETREG3-201ENST00000309428 EBF1Q9UH73 591 aa12.71□□□□□ -0.37
RETREG3-201ENST00000309428 PNMA8BQ9ULN7 279 aaPredicted RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms