RNA–Protein interactions for RNA: ENST00000309241.9

PPARGC1B-201, Transcript of PPARG coactivator 1 beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PPARGC1B, Length 10,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-201ENST00000309241 PPP1R3GB7ZBB8 358 aa8.36□□□□□ -1.07
PPARGC1B-201ENST00000309241 NR5A2O00482 541 aa8.36□□□□□ -1.07
PPARGC1B-201ENST00000309241 KCNQ2O43526 872 aa8.36□□□□□ -1.07
PPARGC1B-201ENST00000309241 SLC25A12O75746 678 aa8.36□□□□□ -1.07
PPARGC1B-201ENST00000309241 COX7A2P14406 83 aa8.36□□□□□ -1.07
PPARGC1B-201ENST00000309241 SDC2P34741 201 aa8.36□□□□□ -1.07
PPARGC1B-201ENST00000309241 TBX4P57082 545 aa8.36□□□□□ -1.07
PPARGC1B-201ENST00000309241 CDC42EP5Q6NZY7 148 aa8.36□□□□□ -1.07
PPARGC1B-201ENST00000309241 RPTNQ6XPR3 784 aa8.36□□□□□ -1.07
PPARGC1B-201ENST00000309241 SLFN11Q7Z7L1 901 aa8.36□□□□□ -1.07
PPARGC1B-201ENST00000309241 GPALPP1Q8IXQ4 340 aa8.36□□□□□ -1.07
PPARGC1B-201ENST00000309241 GOLM1Q8NBJ4 401 aa8.36□□□□□ -1.07
PPARGC1B-201ENST00000309241 ACSF2Q96CM8 615 aaPredicted RBP8.36□□□□□ -1.07
PPARGC1B-201ENST00000309241 RTKNQ9BST9 563 aa8.36□□□□□ -1.07
PPARGC1B-201ENST00000309241 TARS2Q9BW92 718 aaKnown RBP8.36□□□□□ -1.07
PPARGC1B-201ENST00000309241 ZDHHC6Q9H6R6 413 aa8.36□□□□□ -1.07
PPARGC1B-201ENST00000309241 NKX1-2Q9UD57 310 aaPredicted RBP8.36□□□□□ -1.07
PPARGC1B-201ENST00000309241 EDARQ9UNE0 448 aa8.36□□□□□ -1.07
PPARGC1B-201ENST00000309241 NAALADL1Q9UQQ1 740 aa8.36□□□□□ -1.07
PPARGC1B-201ENST00000309241 PCDHB5Q9Y5E4 795 aa8.36□□□□□ -1.07
PPARGC1B-201ENST00000309241 PTGES3LE9PB15 166 aa8.36□□□□□ -1.07
PPARGC1B-201ENST00000309241 RBAK-RBAKDNI3L0D1 243 aa8.36□□□□□ -1.07
PPARGC1B-201ENST00000309241 CYP1A2P05177 515 aa8.36□□□□□ -1.07
PPARGC1B-201ENST00000309241 TIE1P35590 1138 aa8.36□□□□□ -1.07
PPARGC1B-201ENST00000309241 CDH17Q12864 832 aa8.36□□□□□ -1.07
PPARGC1B-201ENST00000309241 TBX2Q13207 712 aaPredicted RBP8.36□□□□□ -1.07
PPARGC1B-201ENST00000309241 CYB5R4Q7L1T6 521 aa8.36□□□□□ -1.07
PPARGC1B-201ENST00000309241 FAM151AQ8WW52 585 aa8.36□□□□□ -1.07
PPARGC1B-201ENST00000309241 ZSCAN5AQ9BUG6 496 aa8.36□□□□□ -1.07
PPARGC1B-201ENST00000309241 ROBO2Q9HCK4 1378 aa8.36□□□□□ -1.07
PPARGC1B-201ENST00000309241 NKRFO15226 690 aaKnown RBP eCLIP8.36□□□□□ -1.07
PPARGC1B-201ENST00000309241 RPL9P32969 192 aaKnown RBP8.36□□□□□ -1.07
PPARGC1B-201ENST00000309241 PKNOX1P55347 436 aa8.36□□□□□ -1.07
PPARGC1B-201ENST00000309241 SRP54P61011 504 aaKnown RBP8.36□□□□□ -1.07
PPARGC1B-201ENST00000309241 ACTR3P61158 418 aa8.36□□□□□ -1.07
PPARGC1B-201ENST00000309241 KATNAL2Q8IYT4 538 aa8.36□□□□□ -1.07
PPARGC1B-201ENST00000309241 RASGEF1AQ8N9B8 481 aa8.36□□□□□ -1.07
PPARGC1B-201ENST00000309241 NKX2-3Q8TAU0 364 aa8.36□□□□□ -1.07
PPARGC1B-201ENST00000309241 ATL1Q8WXF7 558 aa8.36□□□□□ -1.07
PPARGC1B-201ENST00000309241 ROPN1LQ96C74 230 aa8.36□□□□□ -1.07
PPARGC1B-201ENST00000309241 OSBPL7Q9BZF2 842 aa8.36□□□□□ -1.07
PPARGC1B-201ENST00000309241 TOR4AQ9NXH8 423 aa8.36□□□□□ -1.07
PPARGC1B-201ENST00000309241 TBC1D14Q9P2M4 693 aa8.36□□□□□ -1.07
PPARGC1B-201ENST00000309241 ZNHIT2Q9UHR6 403 aa8.36□□□□□ -1.07
PPARGC1B-201ENST00000309241 GLS2Q9UI32 602 aa8.36□□□□□ -1.07
PPARGC1B-201ENST00000309241 ARHGEF33A8MVX0 844 aa8.36□□□□□ -1.07
PPARGC1B-201ENST00000309241 GALNT3Q14435 633 aa8.36□□□□□ -1.07
PPARGC1B-201ENST00000309241 DUS1LQ6P1R4 473 aaKnown RBP8.36□□□□□ -1.07
PPARGC1B-201ENST00000309241 SLC38A2Q96QD8 506 aa8.36□□□□□ -1.07
PPARGC1B-201ENST00000309241 XPNPEP3Q9NQH7 507 aa8.36□□□□□ -1.07
PPARGC1B-201ENST00000309241 SLC35C2Q9NQQ7 365 aa8.36□□□□□ -1.07
PPARGC1B-201ENST00000309241 GNPTGQ9UJJ9 305 aa8.36□□□□□ -1.07
PPARGC1B-201ENST00000309241 ZDBF2Q9HCK1 2354 aa8.36□□□□□ -1.07
PPARGC1B-201ENST00000309241 ILVBLA1L0T0 632 aa8.36□□□□□ -1.07
PPARGC1B-201ENST00000309241 BCLAF3A2AJT9 711 aaKnown RBP8.36□□□□□ -1.07
PPARGC1B-201ENST00000309241 LYPLAL1Q5VWZ2 237 aa8.36□□□□□ -1.07
PPARGC1B-201ENST00000309241 TEFMQ96QE5 360 aaKnown RBP8.36□□□□□ -1.07
PPARGC1B-201ENST00000309241 TLR10Q9BXR5 811 aa8.36□□□□□ -1.07
PPARGC1B-201ENST00000309241 A0A1B0GVG6 124 aa8.36□□□□□ -1.07
PPARGC1B-201ENST00000309241 ICAM1P05362 532 aa8.36□□□□□ -1.07
PPARGC1B-201ENST00000309241 COMTP21964 271 aa8.36□□□□□ -1.07
PPARGC1B-201ENST00000309241 F8A1P23610 371 aa8.36□□□□□ -1.07
PPARGC1B-201ENST00000309241 GK3PQ14409 553 aa8.36□□□□□ -1.07
PPARGC1B-201ENST00000309241 ZNF268Q14587 947 aaPredicted RBP8.36□□□□□ -1.07
PPARGC1B-201ENST00000309241 ANKDD1AQ495B1 522 aa8.36□□□□□ -1.07
PPARGC1B-201ENST00000309241 RNF148Q8N7C7 305 aa8.36□□□□□ -1.07
PPARGC1B-201ENST00000309241 UQCC2Q9BRT2 126 aa8.36□□□□□ -1.07
PPARGC1B-201ENST00000309241 DDX43Q9NXZ2 648 aaKnown RBP8.36□□□□□ -1.07
PPARGC1B-201ENST00000309241 TBX20Q9UMR3 447 aa8.36□□□□□ -1.07
PPARGC1B-201ENST00000309241 MAGED1Q9Y5V3 778 aaPredicted RBP8.36□□□□□ -1.07
PPARGC1B-201ENST00000309241 PRODHO43272 600 aa8.36□□□□□ -1.07
PPARGC1B-201ENST00000309241 GPIP06744 558 aa8.36□□□□□ -1.07
PPARGC1B-201ENST00000309241 RRP1BQ14684 758 aaKnown RBP8.36□□□□□ -1.07
PPARGC1B-201ENST00000309241 CRTC3Q6UUV7 619 aa8.36□□□□□ -1.07
PPARGC1B-201ENST00000309241 LPCAT1Q8NF37 534 aa8.36□□□□□ -1.07
PPARGC1B-201ENST00000309241 NR4A3Q92570 626 aa8.36□□□□□ -1.07
PPARGC1B-201ENST00000309241 PPP1R10Q96QC0 940 aaKnown RBP8.36□□□□□ -1.07
PPARGC1B-201ENST00000309241 KCNH7Q9NS40 1196 aa8.36□□□□□ -1.07
PPARGC1B-201ENST00000309241 MEGF6O75095 1541 aa8.35□□□□□ -1.07
PPARGC1B-201ENST00000309241 OCLNQ16625 522 aa8.35□□□□□ -1.07
PPARGC1B-201ENST00000309241 SNX32Q86XE0 403 aa8.35□□□□□ -1.07
PPARGC1B-201ENST00000309241 MTFR1LQ9H019 292 aa8.35□□□□□ -1.07
PPARGC1B-201ENST00000309241 MRPL17Q9NRX2 175 aaKnown RBP8.35□□□□□ -1.07
PPARGC1B-201ENST00000309241 ELOVL2Q9NXB9 296 aa8.35□□□□□ -1.07
PPARGC1B-201ENST00000309241 MRPS23Q9Y3D9 190 aaKnown RBP8.35□□□□□ -1.07
PPARGC1B-201ENST00000309241 ESPL1Q14674 2120 aa8.35□□□□□ -1.07
PPARGC1B-201ENST00000309241 APOC1P02654 83 aa8.35□□□□□ -1.07
PPARGC1B-201ENST00000309241 GPR15P49685 360 aa8.35□□□□□ -1.07
PPARGC1B-201ENST00000309241 FSCN1Q16658 493 aaKnown RBP8.35□□□□□ -1.07
PPARGC1B-201ENST00000309241 OTUD3Q5T2D3 398 aaPredicted RBP8.35□□□□□ -1.07
PPARGC1B-201ENST00000309241 C12orf56Q8IXR9 622 aa8.35□□□□□ -1.07
PPARGC1B-201ENST00000309241 IL22Q9GZX6 179 aa8.35□□□□□ -1.07
PPARGC1B-201ENST00000309241 PSMD13Q9UNM6 376 aa8.35□□□□□ -1.07
PPARGC1B-201ENST00000309241 ZNF267Q14586 743 aaPredicted RBP8.35□□□□□ -1.07
PPARGC1B-201ENST00000309241 SMCO1Q147U7 214 aa8.35□□□□□ -1.07
PPARGC1B-201ENST00000309241 CFL2Q9Y281 166 aa8.35□□□□□ -1.07
PPARGC1B-201ENST00000309241 I3L521 148 aa8.35□□□□□ -1.07
PPARGC1B-201ENST00000309241 PDHXO00330 501 aa8.35□□□□□ -1.07
PPARGC1B-201ENST00000309241 TSPAN3O60637 253 aa8.35□□□□□ -1.07
PPARGC1B-201ENST00000309241 TMCC2O75069 709 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms