RNA–Protein interactions for RNA: ENST00000308259.9

MSRB3-201, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-201ENST00000308259 TRNP1Q6NT89 227 aa10.52□□□□□ -0.72
MSRB3-201ENST00000308259 TRMT10BQ6PF06 316 aaKnown RBP10.52□□□□□ -0.72
MSRB3-201ENST00000308259 BBS12Q6ZW61 710 aa10.52□□□□□ -0.72
MSRB3-201ENST00000308259 WDR49Q8IV35 697 aa10.52□□□□□ -0.72
MSRB3-201ENST00000308259 DHRSXQ8N5I4 330 aa10.52□□□□□ -0.72
MSRB3-201ENST00000308259 PIWIL2Q8TC59 973 aaKnown RBP10.52□□□□□ -0.72
MSRB3-201ENST00000308259 DEPDC1BQ8WUY9 529 aa10.52□□□□□ -0.72
MSRB3-201ENST00000308259 ACO2Q99798 780 aaKnown RBP10.52□□□□□ -0.72
MSRB3-201ENST00000308259 CEP41Q9BYV8 373 aa10.52□□□□□ -0.72
MSRB3-201ENST00000308259 PPCSQ9HAB8 311 aa10.52□□□□□ -0.72
MSRB3-201ENST00000308259 KLQ9UEF7 1012 aa10.52□□□□□ -0.72
MSRB3-201ENST00000308259 MAGED2Q9UNF1 606 aaPredicted RBP10.52□□□□□ -0.72
MSRB3-201ENST00000308259 B8ZZF3 427 aa10.52□□□□□ -0.73
MSRB3-201ENST00000308259 FAM189A1O60320 539 aa10.52□□□□□ -0.73
MSRB3-201ENST00000308259 SCO1O75880 301 aa10.52□□□□□ -0.73
MSRB3-201ENST00000308259 MICAL2O94851 1124 aa10.52□□□□□ -0.73
MSRB3-201ENST00000308259 HMGCRP04035 888 aa10.52□□□□□ -0.73
MSRB3-201ENST00000308259 PRKCAP17252 672 aa10.52□□□□□ -0.73
MSRB3-201ENST00000308259 RBL1P28749 1068 aa10.52□□□□□ -0.73
MSRB3-201ENST00000308259 ACADSBP45954 432 aa10.52□□□□□ -0.73
MSRB3-201ENST00000308259 ATXN1P54253 815 aaKnown RBP10.52□□□□□ -0.73
MSRB3-201ENST00000308259 SELENBP1Q13228 472 aa10.52□□□□□ -0.73
MSRB3-201ENST00000308259 DSC3Q14574 896 aa10.52□□□□□ -0.73
MSRB3-201ENST00000308259 CLEC4FQ8N1N0 589 aa10.52□□□□□ -0.73
MSRB3-201ENST00000308259 MPP5Q8N3R9 675 aa10.52□□□□□ -0.73
MSRB3-201ENST00000308259 CPB2Q96IY4 423 aa10.52□□□□□ -0.73
MSRB3-201ENST00000308259 ELOVL4Q9GZR5 314 aa10.52□□□□□ -0.73
MSRB3-201ENST00000308259 ABHD16BQ9H3Z7 469 aa10.52□□□□□ -0.73
MSRB3-201ENST00000308259 FAM96AQ9H5X1 160 aa10.52□□□□□ -0.73
MSRB3-201ENST00000308259 TMEM5Q9Y2B1 443 aa10.52□□□□□ -0.73
MSRB3-201ENST00000308259 BTBD3Q9Y2F9 522 aa10.52□□□□□ -0.73
MSRB3-201ENST00000308259 TYW5A2RUC4 315 aaKnown RBP10.52□□□□□ -0.73
MSRB3-201ENST00000308259 FAM149AA5PLN7 773 aa10.52□□□□□ -0.73
MSRB3-201ENST00000308259 HDAC3O15379 428 aa10.52□□□□□ -0.73
MSRB3-201ENST00000308259 NUAK1O60285 661 aa10.52□□□□□ -0.73
MSRB3-201ENST00000308259 SNAP91O60641 907 aa10.52□□□□□ -0.73
MSRB3-201ENST00000308259 TNNC2P02585 160 aa10.52□□□□□ -0.73
MSRB3-201ENST00000308259 IQCF3P0C7M6 154 aa10.52□□□□□ -0.73
MSRB3-201ENST00000308259 GLULP15104 373 aa10.52□□□□□ -0.73
MSRB3-201ENST00000308259 MCCD1P59942 119 aaPredicted RBP10.52□□□□□ -0.73
MSRB3-201ENST00000308259 PRKCQQ04759 706 aa10.52□□□□□ -0.73
MSRB3-201ENST00000308259 PMS2P3Q13401 168 aa10.52□□□□□ -0.73
MSRB3-201ENST00000308259 DGKDQ16760 1214 aa10.52□□□□□ -0.73
MSRB3-201ENST00000308259 CA9Q16790 459 aa10.52□□□□□ -0.73
MSRB3-201ENST00000308259 FAM110CQ1W6H9 321 aa10.52□□□□□ -0.73
MSRB3-201ENST00000308259 CCDC14Q49A88 953 aa10.52□□□□□ -0.73
MSRB3-201ENST00000308259 FASTKD1Q53R41 847 aaKnown RBP10.52□□□□□ -0.73
MSRB3-201ENST00000308259 SPOUT1Q5T280 376 aaKnown RBP10.52□□□□□ -0.73
MSRB3-201ENST00000308259 LRRC38Q5VT99 294 aa10.52□□□□□ -0.73
MSRB3-201ENST00000308259 ATP6V0D2Q8N8Y2 350 aa10.52□□□□□ -0.73
MSRB3-201ENST00000308259 HM13Q8TCT9 377 aa10.52□□□□□ -0.73
MSRB3-201ENST00000308259 AKAP1Q92667 903 aaKnown RBP eCLIP10.52□□□□□ -0.73
MSRB3-201ENST00000308259 C12orf42Q96LP6 360 aa10.52□□□□□ -0.73
MSRB3-201ENST00000308259 ZNF347Q96SE7 839 aa10.52□□□□□ -0.73
MSRB3-201ENST00000308259 UBA2Q9UBT2 640 aaPredicted RBP10.52□□□□□ -0.73
MSRB3-201ENST00000308259 KCNN3Q9UGI6 736 aa10.52□□□□□ -0.73
MSRB3-201ENST00000308259 VANGL2Q9ULK5 521 aa10.52□□□□□ -0.73
MSRB3-201ENST00000308259 NFASCO94856 1347 aa10.52□□□□□ -0.73
MSRB3-201ENST00000308259 PDGFRAP16234 1089 aa10.51□□□□□ -0.73
MSRB3-201ENST00000308259 PTPN1P18031 435 aaKnown RBP10.51□□□□□ -0.73
MSRB3-201ENST00000308259 EPHA3P29320 983 aa10.51□□□□□ -0.73
MSRB3-201ENST00000308259 ZNF667Q5HYK9 610 aa10.51□□□□□ -0.73
MSRB3-201ENST00000308259 TREML2Q5T2D2 321 aa10.51□□□□□ -0.73
MSRB3-201ENST00000308259 ANKRD26P1Q6NSI1 321 aa10.51□□□□□ -0.73
MSRB3-201ENST00000308259 ABRAXAS1Q6UWZ7 409 aa10.51□□□□□ -0.73
MSRB3-201ENST00000308259 FRMD7Q6ZUT3 714 aa10.51□□□□□ -0.73
MSRB3-201ENST00000308259 HDDC2Q7Z4H3 204 aa10.51□□□□□ -0.73
MSRB3-201ENST00000308259 LEMD2Q8NC56 503 aa10.51□□□□□ -0.73
MSRB3-201ENST00000308259 ATXN7L3BQ96GX2 97 aa10.51□□□□□ -0.73
MSRB3-201ENST00000308259 ZBED3Q96IU2 234 aaPredicted RBP10.51□□□□□ -0.73
MSRB3-201ENST00000308259 SCYL1Q96KG9 808 aa10.51□□□□□ -0.73
MSRB3-201ENST00000308259 WDR41Q9HAD4 459 aa10.51□□□□□ -0.73
MSRB3-201ENST00000308259 KCTD5Q9NXV2 234 aa10.51□□□□□ -0.73
MSRB3-201ENST00000308259 MTRRQ9UBK8 725 aa10.51□□□□□ -0.73
MSRB3-201ENST00000308259 SLC45A1Q9Y2W3 748 aa10.51□□□□□ -0.73
MSRB3-201ENST00000308259 BRWD3Q6RI45 1802 aa10.51□□□□□ -0.73
MSRB3-201ENST00000308259 OGTO15294 1046 aa10.51□□□□□ -0.73
MSRB3-201ENST00000308259 DYRK3O43781 588 aa10.51□□□□□ -0.73
MSRB3-201ENST00000308259 KATNA1O75449 491 aa10.51□□□□□ -0.73
MSRB3-201ENST00000308259 OR7A10O76100 309 aa10.51□□□□□ -0.73
MSRB3-201ENST00000308259 ARIH2O95376 493 aa10.51□□□□□ -0.73
MSRB3-201ENST00000308259 LSM8O95777 96 aaKnown RBP10.51□□□□□ -0.73
MSRB3-201ENST00000308259 UBE3AQ05086 875 aa10.51□□□□□ -0.73
MSRB3-201ENST00000308259 TRIM32Q13049 653 aa10.51□□□□□ -0.73
MSRB3-201ENST00000308259 AMHR2Q16671 573 aa10.51□□□□□ -0.73
MSRB3-201ENST00000308259 TBCELQ5QJ74 424 aa10.51□□□□□ -0.73
MSRB3-201ENST00000308259 ALKBH2Q6NS38 261 aa10.51□□□□□ -0.73
MSRB3-201ENST00000308259 MAGEE2Q8TD90 523 aaPredicted RBP10.51□□□□□ -0.73
MSRB3-201ENST00000308259 RXFP2Q8WXD0 754 aa10.51□□□□□ -0.73
MSRB3-201ENST00000308259 JPH3Q8WXH2 748 aaPredicted RBP10.51□□□□□ -0.73
MSRB3-201ENST00000308259 RCN3Q96D15 328 aa10.51□□□□□ -0.73
MSRB3-201ENST00000308259 ALPK1Q96QP1 1244 aa10.51□□□□□ -0.73
MSRB3-201ENST00000308259 OR2B2Q9GZK3 357 aa10.51□□□□□ -0.73
MSRB3-201ENST00000308259 C20orf27Q9GZN8 174 aa10.51□□□□□ -0.73
MSRB3-201ENST00000308259 MKRN2Q9H000 416 aaKnown RBP10.51□□□□□ -0.73
MSRB3-201ENST00000308259 COG4Q9H9E3 785 aa10.51□□□□□ -0.73
MSRB3-201ENST00000308259 ACSS2Q9NR19 701 aa10.51□□□□□ -0.73
MSRB3-201ENST00000308259 FAM49BQ9NUQ9 324 aa10.51□□□□□ -0.73
MSRB3-201ENST00000308259 BAG5Q9UL15 447 aa10.51□□□□□ -0.73
MSRB3-201ENST00000308259 ZNF646O15015 1829 aaPredicted RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms