RNA–Protein interactions for RNA: ENST00000305409.2

SCG2-201, Transcript of secretogranin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG2, Length 2,576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-201ENST00000305409 APCDD1Q8J025 514 aa11.44□□□□□ -0.58
SCG2-201ENST00000305409 TDRD5Q8NAT2 981 aaKnown RBP11.44□□□□□ -0.58
SCG2-201ENST00000305409 KLHL23Q8NBE8 558 aa11.44□□□□□ -0.58
SCG2-201ENST00000305409 FAM13CQ8NE31 585 aa11.44□□□□□ -0.58
SCG2-201ENST00000305409 OR4K2Q8NGD2 314 aa11.44□□□□□ -0.58
SCG2-201ENST00000305409 OVCA2Q8WZ82 227 aa11.44□□□□□ -0.58
SCG2-201ENST00000305409 FATE1Q969F0 183 aa11.44□□□□□ -0.58
SCG2-201ENST00000305409 PHF21BQ96EK2 531 aa11.44□□□□□ -0.58
SCG2-201ENST00000305409 TMA16Q96EY4 203 aaKnown RBP11.44□□□□□ -0.58
SCG2-201ENST00000305409 COG4Q9H9E3 785 aa11.44□□□□□ -0.58
SCG2-201ENST00000305409 TLR9Q9NR96 1032 aa11.44□□□□□ -0.58
SCG2-201ENST00000305409 IGSF5Q9NSI5 407 aa11.44□□□□□ -0.58
SCG2-201ENST00000305409 TAS2R1Q9NYW7 299 aa11.44□□□□□ -0.58
SCG2-201ENST00000305409 TANC1Q9C0D5 1861 aa11.44□□□□□ -0.58
SCG2-201ENST00000305409 ILVBLA1L0T0 632 aa11.43□□□□□ -0.58
SCG2-201ENST00000305409 ZNF195O14628 629 aa11.43□□□□□ -0.58
SCG2-201ENST00000305409 CCL16O15467 120 aa11.43□□□□□ -0.58
SCG2-201ENST00000305409 ZMPSTE24O75844 475 aa11.43□□□□□ -0.58
SCG2-201ENST00000305409 ATP5HO75947 161 aa11.43□□□□□ -0.58
SCG2-201ENST00000305409 PIGNO95427 931 aa11.43□□□□□ -0.58
SCG2-201ENST00000305409 CXCL14O95715 111 aa11.43□□□□□ -0.58
SCG2-201ENST00000305409 JUNP05412 331 aaKnown RBP11.43□□□□□ -0.58
SCG2-201ENST00000305409 MYL4P12829 197 aa11.43□□□□□ -0.58
SCG2-201ENST00000305409 HNRNPLP14866 589 aaKnown RBP eCLIP11.43□□□□□ -0.58
SCG2-201ENST00000305409 GM2AP17900 193 aa11.43□□□□□ -0.58
SCG2-201ENST00000305409 KCNC1P48547 511 aa11.43□□□□□ -0.58
SCG2-201ENST00000305409 SEMG2Q02383 582 aa11.43□□□□□ -0.58
SCG2-201ENST00000305409 FBXO48Q5FWF7 155 aa11.43□□□□□ -0.58
SCG2-201ENST00000305409 ZYG11AQ6WRX3 759 aa11.43□□□□□ -0.58
SCG2-201ENST00000305409 CCDC117Q8IWD4 279 aaPredicted RBP11.43□□□□□ -0.58
SCG2-201ENST00000305409 TCEAL8Q8IYN2 117 aa11.43□□□□□ -0.58
SCG2-201ENST00000305409 TXNDC5Q8NBS9 432 aaKnown RBP11.43□□□□□ -0.58
SCG2-201ENST00000305409 OR6Y1Q8NGX8 325 aa11.43□□□□□ -0.58
SCG2-201ENST00000305409 TTC8Q8TAM2 541 aa11.43□□□□□ -0.58
SCG2-201ENST00000305409 SHKBP1Q8TBC3 707 aa11.43□□□□□ -0.58
SCG2-201ENST00000305409 FEM1CQ96JP0 617 aa11.43□□□□□ -0.58
SCG2-201ENST00000305409 TRIB3Q96RU7 358 aa11.43□□□□□ -0.58
SCG2-201ENST00000305409 SAR1AQ9NR31 198 aa11.43□□□□□ -0.58
SCG2-201ENST00000305409 ZDHHC2Q9UIJ5 367 aa11.43□□□□□ -0.58
SCG2-201ENST00000305409 PCDHB12Q9Y5F1 795 aa11.43□□□□□ -0.58
SCG2-201ENST00000305409 RAI2Q9Y5P3 530 aa11.43□□□□□ -0.58
SCG2-201ENST00000305409 CHD9Q3L8U1 2897 aa11.43□□□□□ -0.58
SCG2-201ENST00000305409 LOC100653049A0A140TA62 436 aa11.43□□□□□ -0.58
SCG2-201ENST00000305409 UBA6A0AVT1 1052 aaPredicted RBP11.43□□□□□ -0.58
SCG2-201ENST00000305409 LCHNA4D1U4 455 aa11.43□□□□□ -0.58
SCG2-201ENST00000305409 CAPN14A8MX76 684 aa11.43□□□□□ -0.58
SCG2-201ENST00000305409 A8MX80 341 aa11.43□□□□□ -0.58
SCG2-201ENST00000305409 B2RBV5 119 aa11.43□□□□□ -0.58
SCG2-201ENST00000305409 CD3EAPO15446 510 aaKnown RBP11.43□□□□□ -0.58
SCG2-201ENST00000305409 GYG2O15488 501 aa11.43□□□□□ -0.58
SCG2-201ENST00000305409 SMAD6O43541 496 aaKnown RBP11.43□□□□□ -0.58
SCG2-201ENST00000305409 BNIP3LO60238 219 aa11.43□□□□□ -0.58
SCG2-201ENST00000305409 GREM1O60565 184 aa11.43□□□□□ -0.58
SCG2-201ENST00000305409 SIN3BO75182 1162 aa11.43□□□□□ -0.58
SCG2-201ENST00000305409 KRT34O76011 436 aa11.43□□□□□ -0.58
SCG2-201ENST00000305409 KLHL2O95198 593 aa11.43□□□□□ -0.58
SCG2-201ENST00000305409 PRAMEF12O95522 483 aa11.43□□□□□ -0.58
SCG2-201ENST00000305409 NDST3O95803 873 aa11.43□□□□□ -0.58
SCG2-201ENST00000305409 CTPS1P17812 591 aa11.43□□□□□ -0.58
SCG2-201ENST00000305409 LEPRP48357 1165 aaKnown RBP11.43□□□□□ -0.58
SCG2-201ENST00000305409 CDH18Q13634 790 aa11.43□□□□□ -0.58
SCG2-201ENST00000305409 CFAP157Q5JU67 520 aa11.43□□□□□ -0.58
SCG2-201ENST00000305409 ZNF549Q6P9A3 640 aa11.43□□□□□ -0.58
SCG2-201ENST00000305409 GLT6D1Q7Z4J2 308 aa11.43□□□□□ -0.58
SCG2-201ENST00000305409 BBS7Q8IWZ6 715 aa11.43□□□□□ -0.58
SCG2-201ENST00000305409 BBS5Q8N3I7 341 aa11.43□□□□□ -0.58
SCG2-201ENST00000305409 DDI1Q8WTU0 396 aa11.43□□□□□ -0.58
SCG2-201ENST00000305409 STYXQ8WUJ0 223 aa11.43□□□□□ -0.58
SCG2-201ENST00000305409 CLPTM1LQ96KA5 538 aa11.43□□□□□ -0.58
SCG2-201ENST00000305409 OR52B2Q96RD2 323 aa11.43□□□□□ -0.58
SCG2-201ENST00000305409 RANBP9Q96S59 729 aa11.43□□□□□ -0.58
SCG2-201ENST00000305409 CORO1BQ9BR76 489 aa11.43□□□□□ -0.58
SCG2-201ENST00000305409 FEM1AQ9BSK4 669 aa11.43□□□□□ -0.58
SCG2-201ENST00000305409 MFSD1Q9H3U5 465 aa11.43□□□□□ -0.58
SCG2-201ENST00000305409 WBP1LQ9NX94 342 aa11.43□□□□□ -0.58
SCG2-201ENST00000305409 CFAP97Q9P2B7 532 aa11.43□□□□□ -0.58
SCG2-201ENST00000305409 APOBEC2Q9Y235 224 aaKnown RBP11.43□□□□□ -0.58
SCG2-201ENST00000305409 VWA7Q9Y334 891 aa11.43□□□□□ -0.58
SCG2-201ENST00000305409 HIDE1A8MVS5 230 aa11.42□□□□□ -0.58
SCG2-201ENST00000305409 TARM1B6A8C7 271 aa11.42□□□□□ -0.58
SCG2-201ENST00000305409 H0Y3Z8 333 aa11.42□□□□□ -0.58
SCG2-201ENST00000305409 ENTPD5O75356 428 aa11.42□□□□□ -0.58
SCG2-201ENST00000305409 GLP2RO95838 553 aa11.42□□□□□ -0.58
SCG2-201ENST00000305409 FGF1P05230 155 aa11.42□□□□□ -0.58
SCG2-201ENST00000305409 HLA-DPA1P20036 260 aa11.42□□□□□ -0.58
SCG2-201ENST00000305409 EPHA3P29320 983 aa11.42□□□□□ -0.58
SCG2-201ENST00000305409 PMLP29590 882 aa11.42□□□□□ -0.58
SCG2-201ENST00000305409 HADHAP40939 763 aa11.42□□□□□ -0.58
SCG2-201ENST00000305409 GJA8P48165 433 aa11.42□□□□□ -0.58
SCG2-201ENST00000305409 ERVFC1P60507 584 aa11.42□□□□□ -0.58
SCG2-201ENST00000305409 TRAF2Q12933 501 aa11.42□□□□□ -0.58
SCG2-201ENST00000305409 C1orf53Q5VUE5 145 aa11.42□□□□□ -0.58
SCG2-201ENST00000305409 LIPMQ5VYY2 423 aa11.42□□□□□ -0.58
SCG2-201ENST00000305409 PHTF2Q8N3S3 785 aa11.42□□□□□ -0.58
SCG2-201ENST00000305409 BRSK1Q8TDC3 778 aa11.42□□□□□ -0.58
SCG2-201ENST00000305409 TRMT2BQ96GJ1 504 aaKnown RBP11.42□□□□□ -0.58
SCG2-201ENST00000305409 CDKN2AIPNLQ96HQ2 116 aa11.42□□□□□ -0.58
SCG2-201ENST00000305409 RPL10LQ96L21 214 aaKnown RBP11.42□□□□□ -0.58
SCG2-201ENST00000305409 MARK4Q96L34 752 aa11.42□□□□□ -0.58
SCG2-201ENST00000305409 CCDC106Q9BWC9 280 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms