RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 USP36Q9P275 1121 aaKnown RBP27.26■■□□□ 1.95
HDAC3-201ENST00000305264 PPIL1Q9Y3C6 166 aa27.26■■□□□ 1.95
HDAC3-201ENST00000305264 SPO11Q9Y5K1 396 aa27.26■■□□□ 1.95
HDAC3-201ENST00000305264 CUL9Q8IWT3 2517 aa27.26■■□□□ 1.95
HDAC3-201ENST00000305264 NPIPB15A6NHN6 443 aaPredicted RBP27.26■■□□□ 1.95
HDAC3-201ENST00000305264 TUBB4BP68371 445 aa27.26■■□□□ 1.95
HDAC3-201ENST00000305264 IFT81Q8WYA0 676 aa27.26■■□□□ 1.95
HDAC3-201ENST00000305264 CAPN8A6NHC0 703 aa27.25■■□□□ 1.95
HDAC3-201ENST00000305264 HNF1BP35680 557 aa27.25■■□□□ 1.95
HDAC3-201ENST00000305264 CARSP49589 748 aaKnown RBP27.25■■□□□ 1.95
HDAC3-201ENST00000305264 SARNPP82979 210 aaKnown RBP27.25■■□□□ 1.95
HDAC3-201ENST00000305264 MSLNQ13421 630 aaPredicted RBP27.25■■□□□ 1.95
HDAC3-201ENST00000305264 USP30Q70CQ3 517 aa27.25■■□□□ 1.95
HDAC3-201ENST00000305264 USP45Q70EL2 814 aa27.25■■□□□ 1.95
HDAC3-201ENST00000305264 FAM124AQ86V42 546 aa27.25■■□□□ 1.95
HDAC3-201ENST00000305264 DTWD2Q8NBA8 298 aa27.25■■□□□ 1.95
HDAC3-201ENST00000305264 SCRN2Q96FV2 425 aa27.25■■□□□ 1.95
HDAC3-201ENST00000305264 ZDHHC18Q9NUE0 388 aa27.25■■□□□ 1.95
HDAC3-201ENST00000305264 B4GALT6Q9UBX8 382 aa27.25■■□□□ 1.95
HDAC3-201ENST00000305264 EML5Q05BV3 1969 aa27.25■■□□□ 1.95
HDAC3-201ENST00000305264 A8MX80 341 aa27.24■■□□□ 1.95
HDAC3-201ENST00000305264 NDC80O14777 642 aa27.24■■□□□ 1.95
HDAC3-201ENST00000305264 SESN2P58004 480 aaPredicted RBP27.24■■□□□ 1.95
HDAC3-201ENST00000305264 TAS2R38P59533 333 aa27.24■■□□□ 1.95
HDAC3-201ENST00000305264 FAM193AP78312 1265 aa27.24■■□□□ 1.95
HDAC3-201ENST00000305264 DMWDQ09019 674 aa27.24■■□□□ 1.95
HDAC3-201ENST00000305264 C1orf210Q8IVY1 113 aa27.24■■□□□ 1.95
HDAC3-201ENST00000305264 IFT20Q8IY31 132 aa27.24■■□□□ 1.95
HDAC3-201ENST00000305264 XAB2Q9HCS7 855 aaKnown RBP27.24■■□□□ 1.95
HDAC3-201ENST00000305264 SMAPO00193 183 aa27.24■■□□□ 1.95
HDAC3-201ENST00000305264 AREL1O15033 823 aa27.24■■□□□ 1.95
HDAC3-201ENST00000305264 LAMTOR5O43504 91 aa27.24■■□□□ 1.95
HDAC3-201ENST00000305264 ECHS1P30084 290 aa27.24■■□□□ 1.95
HDAC3-201ENST00000305264 MMP12P39900 470 aa27.24■■□□□ 1.95
HDAC3-201ENST00000305264 MAGEA3P43357 314 aa27.24■■□□□ 1.95
HDAC3-201ENST00000305264 NAA30Q147X3 362 aaPredicted RBP27.24■■□□□ 1.95
HDAC3-201ENST00000305264 CERCAMQ5T4B2 595 aa27.24■■□□□ 1.95
HDAC3-201ENST00000305264 KBTBD6Q86V97 674 aa27.24■■□□□ 1.95
HDAC3-201ENST00000305264 MAML2Q8IZL2 1156 aaPredicted RBP27.24■■□□□ 1.95
HDAC3-201ENST00000305264 BLOC1S5Q8TDH9 187 aa27.24■■□□□ 1.95
HDAC3-201ENST00000305264 ITM2CQ9NQX7 267 aa27.24■■□□□ 1.95
HDAC3-201ENST00000305264 FZD4Q9ULV1 537 aa27.24■■□□□ 1.95
HDAC3-201ENST00000305264 CYP8B1Q9UNU6 501 aa27.24■■□□□ 1.95
HDAC3-201ENST00000305264 LHCGRP22888 699 aa27.23■■□□□ 1.95
HDAC3-201ENST00000305264 AVPR2P30518 371 aa27.23■■□□□ 1.95
HDAC3-201ENST00000305264 FNBP1LQ5T0N5 605 aa27.23■■□□□ 1.95
HDAC3-201ENST00000305264 DENND2CQ68D51 928 aa27.23■■□□□ 1.95
HDAC3-201ENST00000305264 TSPAN33Q86UF1 283 aa27.23■■□□□ 1.95
HDAC3-201ENST00000305264 FADS3Q9Y5Q0 445 aa27.23■■□□□ 1.95
HDAC3-201ENST00000305264 MLNP12872 115 aa27.22■■□□□ 1.95
HDAC3-201ENST00000305264 TDGF1P13385 188 aa27.22■■□□□ 1.95
HDAC3-201ENST00000305264 ADPRHP54922 357 aa27.22■■□□□ 1.95
HDAC3-201ENST00000305264 CRADDP78560 199 aa27.22■■□□□ 1.95
HDAC3-201ENST00000305264 HLTFQ14527 1009 aaKnown RBP eCLIP27.22■■□□□ 1.95
HDAC3-201ENST00000305264 POU6F1Q14863 301 aa27.22■■□□□ 1.95
HDAC3-201ENST00000305264 ERAP2Q6P179 960 aa27.22■■□□□ 1.95
HDAC3-201ENST00000305264 NDUFAF2Q8N183 169 aa27.22■■□□□ 1.95
HDAC3-201ENST00000305264 AGGF1Q8N302 714 aaeCLIP27.22■■□□□ 1.95
HDAC3-201ENST00000305264 RAB7BQ96AH8 199 aa27.22■■□□□ 1.95
HDAC3-201ENST00000305264 LYSMD1Q96S90 227 aa27.22■■□□□ 1.95
HDAC3-201ENST00000305264 NCKAP1Q9Y2A7 1128 aa27.22■■□□□ 1.95
HDAC3-201ENST00000305264 AURKAO14965 403 aa27.22■■□□□ 1.95
HDAC3-201ENST00000305264 BANF1O75531 89 aa27.22■■□□□ 1.95
HDAC3-201ENST00000305264 MGAT1P26572 445 aa27.22■■□□□ 1.95
HDAC3-201ENST00000305264 CAV1Q03135 178 aa27.22■■□□□ 1.95
HDAC3-201ENST00000305264 RALGDSQ12967 914 aa27.22■■□□□ 1.95
HDAC3-201ENST00000305264 CUL1Q13616 776 aa27.22■■□□□ 1.95
HDAC3-201ENST00000305264 LRRK1Q38SD2 2015 aa27.22■■□□□ 1.95
HDAC3-201ENST00000305264 MSS51Q4VC12 460 aa27.22■■□□□ 1.95
HDAC3-201ENST00000305264 ZCCHC9Q8N567 271 aaKnown RBP27.22■■□□□ 1.95
HDAC3-201ENST00000305264 RLN3Q8WXF3 142 aa27.22■■□□□ 1.95
HDAC3-201ENST00000305264 ZNF711Q9Y462 761 aa27.22■■□□□ 1.95
HDAC3-201ENST00000305264 PLRG1O43660 514 aaKnown RBP27.21■■□□□ 1.95
HDAC3-201ENST00000305264 IGLV3-19P01714 112 aa27.21■■□□□ 1.95
HDAC3-201ENST00000305264 SUOXP51687 545 aa27.21■■□□□ 1.95
HDAC3-201ENST00000305264 HIF1AQ16665 826 aa27.21■■□□□ 1.95
HDAC3-201ENST00000305264 CRTC1Q6UUV9 634 aa27.21■■□□□ 1.95
HDAC3-201ENST00000305264 DPPA4Q7L190 304 aa27.21■■□□□ 1.95
HDAC3-201ENST00000305264 MPP5Q8N3R9 675 aa27.21■■□□□ 1.95
HDAC3-201ENST00000305264 FRMD1Q8N878 549 aa27.21■■□□□ 1.95
HDAC3-201ENST00000305264 OR14C36Q8NHC7 312 aa27.21■■□□□ 1.95
HDAC3-201ENST00000305264 MAGEE1Q9HCI5 957 aa27.21■■□□□ 1.95
HDAC3-201ENST00000305264 SLC7A4O43246 635 aa27.2■■□□□ 1.95
HDAC3-201ENST00000305264 SLC4A1P02730 911 aa27.2■■□□□ 1.95
HDAC3-201ENST00000305264 VIPR1P32241 457 aa27.2■■□□□ 1.95
HDAC3-201ENST00000305264 ACSL1P33121 698 aa27.2■■□□□ 1.95
HDAC3-201ENST00000305264 CCDC15Q0P6D6 951 aa27.2■■□□□ 1.95
HDAC3-201ENST00000305264 ELP6Q0PNE2 266 aa27.2■■□□□ 1.95
HDAC3-201ENST00000305264 SFSWAPQ12872 951 aaKnown RBP27.2■■□□□ 1.95
HDAC3-201ENST00000305264 CDKN3Q16667 212 aa27.2■■□□□ 1.95
HDAC3-201ENST00000305264 LRRC66Q68CR7 880 aa27.2■■□□□ 1.95
HDAC3-201ENST00000305264 LYSMD3Q7Z3D4 306 aa27.2■■□□□ 1.95
HDAC3-201ENST00000305264 FAM160A2Q8N612 972 aaPredicted RBP27.2■■□□□ 1.95
HDAC3-201ENST00000305264 WRAP53Q9BUR4 548 aaKnown RBP27.2■■□□□ 1.95
HDAC3-201ENST00000305264 SYBUQ9NX95 663 aa27.2■■□□□ 1.95
HDAC3-201ENST00000305264 NFU1Q9UMS0 254 aa27.2■■□□□ 1.95
HDAC3-201ENST00000305264 SCN8AQ9UQD0 1980 aa27.2■■□□□ 1.95
HDAC3-201ENST00000305264 BPTFQ12830 3046 aa27.2■■□□□ 1.94
HDAC3-201ENST00000305264 PLXND1Q9Y4D7 1925 aa27.2■■□□□ 1.94
HDAC3-201ENST00000305264 C1orf232A0A0U1RR37 186 aa27.2■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms