RNA–Protein interactions for RNA: ENST00000303731.8

TRAPPC1-201, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC1, Length 811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-201ENST00000303731 DPPA4Q7L190 304 aa16.76■□□□□ 0.27
TRAPPC1-201ENST00000303731 LUZP1Q86V48 1076 aa16.76■□□□□ 0.27
TRAPPC1-201ENST00000303731 GKN2Q86XP6 184 aa16.76■□□□□ 0.27
TRAPPC1-201ENST00000303731 OR6C4Q8NGE1 309 aa16.76■□□□□ 0.27
TRAPPC1-201ENST00000303731 HSPH1Q92598 858 aa16.76■□□□□ 0.27
TRAPPC1-201ENST00000303731 WDR92Q96MX6 357 aa16.76■□□□□ 0.27
TRAPPC1-201ENST00000303731 CSPG4P5Q96PW8 444 aa16.76■□□□□ 0.27
TRAPPC1-201ENST00000303731 TCEAL2Q9H3H9 227 aaPredicted RBP16.76■□□□□ 0.27
TRAPPC1-201ENST00000303731 KLQ9UEF7 1012 aa16.76■□□□□ 0.27
TRAPPC1-201ENST00000303731 LCMT1Q9UIC8 334 aa16.76■□□□□ 0.27
TRAPPC1-201ENST00000303731 LUC7L2Q9Y383 392 aaKnown RBP16.76■□□□□ 0.27
TRAPPC1-201ENST00000303731 LRP4O75096 1905 aa16.76■□□□□ 0.27
TRAPPC1-201ENST00000303731 RP1P56715 2156 aa16.75■□□□□ 0.27
TRAPPC1-201ENST00000303731 PTPRQQ9UMZ3 2332 aa16.75■□□□□ 0.27
TRAPPC1-201ENST00000303731 CACNB4O00305 520 aaPredicted RBP16.75■□□□□ 0.27
TRAPPC1-201ENST00000303731 YY2O15391 372 aa16.75■□□□□ 0.27
TRAPPC1-201ENST00000303731 TLX3O43711 291 aaPredicted RBP16.75■□□□□ 0.27
TRAPPC1-201ENST00000303731 USP12O75317 370 aa16.75■□□□□ 0.27
TRAPPC1-201ENST00000303731 HOXC4P09017 264 aaPredicted RBP16.75■□□□□ 0.27
TRAPPC1-201ENST00000303731 RARAP10276 462 aa16.75■□□□□ 0.27
TRAPPC1-201ENST00000303731 IL1R2P27930 398 aa16.75■□□□□ 0.27
TRAPPC1-201ENST00000303731 LSSP48449 732 aa16.75■□□□□ 0.27
TRAPPC1-201ENST00000303731 CDH6P55285 790 aa16.75■□□□□ 0.27
TRAPPC1-201ENST00000303731 KIAA1024LP59773 190 aa16.75■□□□□ 0.27
TRAPPC1-201ENST00000303731 ERVPABLB-1P60509 514 aa16.75■□□□□ 0.27
TRAPPC1-201ENST00000303731 C1orf61Q13536 156 aa16.75■□□□□ 0.27
TRAPPC1-201ENST00000303731 HADHQ16836 314 aaKnown RBP16.75■□□□□ 0.27
TRAPPC1-201ENST00000303731 SMTNL2Q2TAL5 461 aa16.75■□□□□ 0.27
TRAPPC1-201ENST00000303731 ENPP7Q6UWV6 458 aa16.75■□□□□ 0.27
TRAPPC1-201ENST00000303731 LIPIQ6XZB0 460 aa16.75■□□□□ 0.27
TRAPPC1-201ENST00000303731 RBM44Q6ZP01 1051 aaKnown RBP16.75■□□□□ 0.27
TRAPPC1-201ENST00000303731 ARHGAP36Q6ZRI8 547 aa16.75■□□□□ 0.27
TRAPPC1-201ENST00000303731 ZSWIM9Q86XI8 627 aa16.75■□□□□ 0.27
TRAPPC1-201ENST00000303731 HID1Q8IV36 788 aa16.75■□□□□ 0.27
TRAPPC1-201ENST00000303731 SLC35F3Q8IY50 421 aa16.75■□□□□ 0.27
TRAPPC1-201ENST00000303731 ATPAF2Q8N5M1 289 aa16.75■□□□□ 0.27
TRAPPC1-201ENST00000303731 ARL10Q8N8L6 244 aa16.75■□□□□ 0.27
TRAPPC1-201ENST00000303731 NUDCD1Q96RS6 583 aa16.75■□□□□ 0.27
TRAPPC1-201ENST00000303731 THAP2Q9H0W7 228 aa16.75■□□□□ 0.27
TRAPPC1-201ENST00000303731 CAAP1Q9H8G2 361 aa16.75■□□□□ 0.27
TRAPPC1-201ENST00000303731 POLR1BQ9H9Y6 1135 aa16.75■□□□□ 0.27
TRAPPC1-201ENST00000303731 ANAPC7Q9UJX3 599 aa16.75■□□□□ 0.27
TRAPPC1-201ENST00000303731 PNMA8BQ9ULN7 279 aaPredicted RBP16.75■□□□□ 0.27
TRAPPC1-201ENST00000303731 PCDHB1Q9Y5F3 818 aa16.75■□□□□ 0.27
TRAPPC1-201ENST00000303731 DGKBQ9Y6T7 804 aa16.75■□□□□ 0.27
TRAPPC1-201ENST00000303731 MYO1FO00160 1098 aa16.74■□□□□ 0.27
TRAPPC1-201ENST00000303731 PDE2AO00408 941 aaPredicted RBP16.74■□□□□ 0.27
TRAPPC1-201ENST00000303731 TNFRSF10CO14798 259 aa16.74■□□□□ 0.27
TRAPPC1-201ENST00000303731 HTRA2O43464 458 aaPredicted RBP16.74■□□□□ 0.27
TRAPPC1-201ENST00000303731 RECQL5O94762 991 aaPredicted RBP16.74■□□□□ 0.27
TRAPPC1-201ENST00000303731 PCCBP05166 539 aa16.74■□□□□ 0.27
TRAPPC1-201ENST00000303731 CYP1A2P05177 515 aa16.74■□□□□ 0.27
TRAPPC1-201ENST00000303731 MYF5P13349 255 aa16.74■□□□□ 0.27
TRAPPC1-201ENST00000303731 TGM2P21980 687 aa16.74■□□□□ 0.27
TRAPPC1-201ENST00000303731 PCBP4P57723 403 aaKnown RBP16.74■□□□□ 0.27
TRAPPC1-201ENST00000303731 SRP54P61011 504 aaKnown RBP16.74■□□□□ 0.27
TRAPPC1-201ENST00000303731 SLC10A7Q0GE19 358 aa16.74■□□□□ 0.27
TRAPPC1-201ENST00000303731 RALGDSQ12967 914 aa16.74■□□□□ 0.27
TRAPPC1-201ENST00000303731 ISXQ2M1V0 245 aa16.74■□□□□ 0.27
TRAPPC1-201ENST00000303731 ALG11Q2TAA5 492 aa16.74■□□□□ 0.27
TRAPPC1-201ENST00000303731 IGF2-ASQ6U949 168 aa16.74■□□□□ 0.27
TRAPPC1-201ENST00000303731 ZNF248Q8NDW4 579 aa16.74■□□□□ 0.27
TRAPPC1-201ENST00000303731 MGME1Q9BQP7 344 aa16.74■□□□□ 0.27
TRAPPC1-201ENST00000303731 NUP85Q9BW27 656 aa16.74■□□□□ 0.27
TRAPPC1-201ENST00000303731 CLPBQ9H078 707 aa16.74■□□□□ 0.27
TRAPPC1-201ENST00000303731 HAUS2Q9NVX0 235 aa16.74■□□□□ 0.27
TRAPPC1-201ENST00000303731 PADI4Q9UM07 663 aa16.74■□□□□ 0.27
TRAPPC1-201ENST00000303731 OR1A2Q9Y585 309 aa16.74■□□□□ 0.27
TRAPPC1-201ENST00000303731 LOC400499M0QZD8 3231 aa16.74■□□□□ 0.27
TRAPPC1-201ENST00000303731 MUSKO15146 869 aa16.73■□□□□ 0.27
TRAPPC1-201ENST00000303731 MAFKO60675 156 aa16.73■□□□□ 0.27
TRAPPC1-201ENST00000303731 TNFP01375 233 aa16.73■□□□□ 0.27
TRAPPC1-201ENST00000303731 KRT10P13645 584 aa16.73■□□□□ 0.27
TRAPPC1-201ENST00000303731 CR2P20023 1033 aa16.73■□□□□ 0.27
TRAPPC1-201ENST00000303731 AMPD1P23109 780 aa16.73■□□□□ 0.27
TRAPPC1-201ENST00000303731 TRIM23P36406 574 aa16.73■□□□□ 0.27
TRAPPC1-201ENST00000303731 GABREP78334 506 aa16.73■□□□□ 0.27
TRAPPC1-201ENST00000303731 SLC25A11Q02978 314 aaKnown RBP16.73■□□□□ 0.27
TRAPPC1-201ENST00000303731 KRT81Q14533 505 aa16.73■□□□□ 0.27
TRAPPC1-201ENST00000303731 NFKBIBQ15653 356 aa16.73■□□□□ 0.27
TRAPPC1-201ENST00000303731 TSR1Q2NL82 804 aaKnown RBP16.73■□□□□ 0.27
TRAPPC1-201ENST00000303731 ALKBH5Q6P6C2 394 aaKnown RBP16.73■□□□□ 0.27
TRAPPC1-201ENST00000303731 OR56A4Q8NGH8 313 aa16.73■□□□□ 0.27
TRAPPC1-201ENST00000303731 TSACCQ96A04 125 aaPredicted RBP16.73■□□□□ 0.27
TRAPPC1-201ENST00000303731 RBM15Q96T37 977 aaKnown RBP eCLIP16.73■□□□□ 0.27
TRAPPC1-201ENST00000303731 PCDH18Q9HCL0 1135 aa16.73■□□□□ 0.27
TRAPPC1-201ENST00000303731 THSD1Q9NS62 852 aa16.73■□□□□ 0.27
TRAPPC1-201ENST00000303731 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.73■□□□□ 0.27
TRAPPC1-201ENST00000303731 SHROOM3Q8TF72 1996 aa16.73■□□□□ 0.27
TRAPPC1-201ENST00000303731 SMG1Q96Q15 3661 aaKnown RBP16.72■□□□□ 0.27
TRAPPC1-201ENST00000303731 A0A087X0T9 212 aa16.72■□□□□ 0.27
TRAPPC1-201ENST00000303731 PSMD11O00231 422 aa16.72■□□□□ 0.27
TRAPPC1-201ENST00000303731 PEX11BO96011 259 aa16.72■□□□□ 0.27
TRAPPC1-201ENST00000303731 CPP00450 1065 aa16.72■□□□□ 0.27
TRAPPC1-201ENST00000303731 PRKCGP05129 697 aa16.72■□□□□ 0.27
TRAPPC1-201ENST00000303731 MPOP05164 745 aa16.72■□□□□ 0.27
TRAPPC1-201ENST00000303731 FAM228BP0C875 321 aa16.72■□□□□ 0.27
TRAPPC1-201ENST00000303731 CYP2A6P11509 494 aaPredicted RBP16.72■□□□□ 0.27
TRAPPC1-201ENST00000303731 MLLT3P42568 568 aaPredicted RBP16.72■□□□□ 0.27
TRAPPC1-201ENST00000303731 SPIDRQ14159 915 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms