RNA–Protein interactions for RNA: ENST00000303538.12

PDS5A-201, Transcript of PDS5 cohesin associated factor A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDS5A, Length 7,176 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5A-201ENST00000303538 SLC38A3Q99624 504 aa16.79■□□□□ 0.28
PDS5A-201ENST00000303538 CHST7Q9NS84 486 aa16.79■□□□□ 0.28
PDS5A-201ENST00000303538 DUS2Q9NX74 493 aaKnown RBP16.79■□□□□ 0.28
PDS5A-201ENST00000303538 NINJ2Q9NZG7 142 aa16.79■□□□□ 0.28
PDS5A-201ENST00000303538 CDC42P60953 191 aa16.79■□□□□ 0.28
PDS5A-201ENST00000303538 MRPS22P82650 360 aaKnown RBP16.79■□□□□ 0.28
PDS5A-201ENST00000303538 HIPK1Q86Z02 1210 aa16.79■□□□□ 0.28
PDS5A-201ENST00000303538 MAP4K3Q8IVH8 894 aa16.79■□□□□ 0.28
PDS5A-201ENST00000303538 VCPIP1Q96JH7 1222 aa16.79■□□□□ 0.28
PDS5A-201ENST00000303538 COPS8Q99627 209 aa16.79■□□□□ 0.28
PDS5A-201ENST00000303538 PAIP1Q9H074 479 aaKnown RBP16.79■□□□□ 0.28
PDS5A-201ENST00000303538 DCLRE1BQ9H816 532 aa16.79■□□□□ 0.28
PDS5A-201ENST00000303538 PHF11Q9UIL8 331 aa16.79■□□□□ 0.28
PDS5A-201ENST00000303538 TARBP1Q13395 1621 aaKnown RBP16.79■□□□□ 0.28
PDS5A-201ENST00000303538 ITSN1Q15811 1721 aa16.79■□□□□ 0.28
PDS5A-201ENST00000303538 A0A0A0MRY4 1105 aa16.79■□□□□ 0.28
PDS5A-201ENST00000303538 TKTP29401 623 aaKnown RBP16.79■□□□□ 0.28
PDS5A-201ENST00000303538 RRP1BQ14684 758 aaKnown RBP16.79■□□□□ 0.28
PDS5A-201ENST00000303538 EARS2Q5JPH6 523 aaKnown RBP16.79■□□□□ 0.28
PDS5A-201ENST00000303538 CHSY3Q70JA7 882 aa16.79■□□□□ 0.28
PDS5A-201ENST00000303538 POLNQ7Z5Q5 900 aa16.79■□□□□ 0.28
PDS5A-201ENST00000303538 TERB1Q8NA31 727 aa16.79■□□□□ 0.28
PDS5A-201ENST00000303538 HERVK_113Q902F9 699 aa16.79■□□□□ 0.28
PDS5A-201ENST00000303538 SPATA13Q96N96 652 aa16.79■□□□□ 0.28
PDS5A-201ENST00000303538 CDT1Q9H211 546 aa16.79■□□□□ 0.28
PDS5A-201ENST00000303538 SGK2Q9HBY8 427 aa16.79■□□□□ 0.28
PDS5A-201ENST00000303538 IKZF3Q9UKT9 509 aa16.79■□□□□ 0.28
PDS5A-201ENST00000303538 ZNF536O15090 1300 aa16.79■□□□□ 0.28
PDS5A-201ENST00000303538 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.79■□□□□ 0.28
PDS5A-201ENST00000303538 PDX1P52945 283 aa16.79■□□□□ 0.28
PDS5A-201ENST00000303538 TAF10Q12962 218 aa16.79■□□□□ 0.28
PDS5A-201ENST00000303538 RFX4Q33E94 735 aa16.79■□□□□ 0.28
PDS5A-201ENST00000303538 LINGO4Q6UY18 593 aa16.79■□□□□ 0.28
PDS5A-201ENST00000303538 RASSF6Q6ZTQ3 369 aa16.79■□□□□ 0.28
PDS5A-201ENST00000303538 ACO2Q99798 780 aaKnown RBP16.79■□□□□ 0.28
PDS5A-201ENST00000303538 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.79■□□□□ 0.28
PDS5A-201ENST00000303538 MRTO4Q9UKD2 239 aaKnown RBP16.79■□□□□ 0.28
PDS5A-201ENST00000303538 ERVK-11Q9UQG0 969 aa16.79■□□□□ 0.28
PDS5A-201ENST00000303538 STX16-NPEPL1H3BU86 382 aa16.79■□□□□ 0.28
PDS5A-201ENST00000303538 STX16O14662 325 aa16.79■□□□□ 0.28
PDS5A-201ENST00000303538 RPL14P50914 215 aaKnown RBP16.79■□□□□ 0.28
PDS5A-201ENST00000303538 SLC9A6Q92581 669 aa16.79■□□□□ 0.28
PDS5A-201ENST00000303538 SYT17Q9BSW7 474 aa16.79■□□□□ 0.28
PDS5A-201ENST00000303538 EHD3Q9NZN3 535 aa16.79■□□□□ 0.28
PDS5A-201ENST00000303538 CLEC4AQ9UMR7 237 aa16.79■□□□□ 0.28
PDS5A-201ENST00000303538 QSOX1O00391 747 aa16.78■□□□□ 0.28
PDS5A-201ENST00000303538 LSM3P62310 102 aaKnown RBP16.78■□□□□ 0.28
PDS5A-201ENST00000303538 UTS2BQ765I0 119 aa16.78■□□□□ 0.28
PDS5A-201ENST00000303538 UNC93AQ86WB7 457 aa16.78■□□□□ 0.28
PDS5A-201ENST00000303538 C17orf64Q86WR6 236 aa16.78■□□□□ 0.28
PDS5A-201ENST00000303538 DTNBP1Q96EV8 351 aa16.78■□□□□ 0.28
PDS5A-201ENST00000303538 PNMA8CA0A1B0GUJ8 204 aa16.78■□□□□ 0.28
PDS5A-201ENST00000303538 FBXO42Q6P3S6 717 aa16.78■□□□□ 0.28
PDS5A-201ENST00000303538 ZNF549Q6P9A3 640 aa16.78■□□□□ 0.28
PDS5A-201ENST00000303538 CADM2Q8N3J6 435 aa16.78■□□□□ 0.28
PDS5A-201ENST00000303538 MTMR8Q96EF0 704 aa16.78■□□□□ 0.28
PDS5A-201ENST00000303538 CNOT6Q9ULM6 557 aaKnown RBP16.78■□□□□ 0.28
PDS5A-201ENST00000303538 FKBP6O75344 327 aa16.78■□□□□ 0.28
PDS5A-201ENST00000303538 RECQL5O94762 991 aaPredicted RBP16.78■□□□□ 0.28
PDS5A-201ENST00000303538 SLURP2P0DP57 97 aa16.78■□□□□ 0.28
PDS5A-201ENST00000303538 CORO1AP31146 461 aaKnown RBP16.78■□□□□ 0.28
PDS5A-201ENST00000303538 UGT1A5P35504 534 aa16.78■□□□□ 0.28
PDS5A-201ENST00000303538 GRIA3P42263 894 aa16.78■□□□□ 0.28
PDS5A-201ENST00000303538 NEK5Q6P3R8 708 aa16.78■□□□□ 0.28
PDS5A-201ENST00000303538 GALNTL5Q7Z4T8 443 aa16.78■□□□□ 0.28
PDS5A-201ENST00000303538 CLHC1Q8NHS4 586 aa16.78■□□□□ 0.28
PDS5A-201ENST00000303538 EPB41L1Q9H4G0 881 aa16.78■□□□□ 0.28
PDS5A-201ENST00000303538 TMEM134Q9H6X4 195 aa16.78■□□□□ 0.28
PDS5A-201ENST00000303538 BANF1O75531 89 aa16.78■□□□□ 0.28
PDS5A-201ENST00000303538 ASGR1P07306 291 aa16.78■□□□□ 0.28
PDS5A-201ENST00000303538 UGT2B15P54855 530 aa16.78■□□□□ 0.28
PDS5A-201ENST00000303538 SAMD4BQ5PRF9 694 aaKnown RBP16.78■□□□□ 0.28
PDS5A-201ENST00000303538 ARHGAP36Q6ZRI8 547 aa16.78■□□□□ 0.28
PDS5A-201ENST00000303538 HID1Q8IV36 788 aa16.78■□□□□ 0.28
PDS5A-201ENST00000303538 TEX47Q8TBZ9 253 aa16.78■□□□□ 0.28
PDS5A-201ENST00000303538 PNPT1Q8TCS8 783 aaKnown RBP16.78■□□□□ 0.28
PDS5A-201ENST00000303538 KCTD4Q8WVF5 259 aa16.78■□□□□ 0.28
PDS5A-201ENST00000303538 DNASE1L2Q92874 299 aa16.78■□□□□ 0.28
PDS5A-201ENST00000303538 PPCDCQ96CD2 204 aa16.78■□□□□ 0.28
PDS5A-201ENST00000303538 CNTNAP1P78357 1384 aa16.78■□□□□ 0.28
PDS5A-201ENST00000303538 ATP6AP2A0A1C7CYW4 349 aa16.78■□□□□ 0.28
PDS5A-201ENST00000303538 ATP6AP2O75787 350 aa16.78■□□□□ 0.28
PDS5A-201ENST00000303538 CHRNGP07510 517 aa16.78■□□□□ 0.28
PDS5A-201ENST00000303538 ATP4AP20648 1035 aa16.78■□□□□ 0.28
PDS5A-201ENST00000303538 IL12RB1P42701 662 aa16.78■□□□□ 0.28
PDS5A-201ENST00000303538 RNASE12Q5GAN4 147 aaKnown RBP16.78■□□□□ 0.28
PDS5A-201ENST00000303538 SLC9A9Q8IVB4 645 aa16.78■□□□□ 0.28
PDS5A-201ENST00000303538 KBTBD2Q8IY47 623 aa16.78■□□□□ 0.28
PDS5A-201ENST00000303538 RNF31Q96EP0 1072 aa16.78■□□□□ 0.28
PDS5A-201ENST00000303538 SLC25A23Q9BV35 468 aa16.78■□□□□ 0.28
PDS5A-201ENST00000303538 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.78■□□□□ 0.284e-8■■■■□ 25.2
PDS5A-201ENST00000303538 GIT1Q9Y2X7 761 aa16.78■□□□□ 0.28
PDS5A-201ENST00000303538 FRMPD4Q14CM0 1322 aa16.78■□□□□ 0.28
PDS5A-201ENST00000303538 SALL1Q9NSC2 1324 aa16.78■□□□□ 0.28
PDS5A-201ENST00000303538 C1RP00736 705 aa16.77■□□□□ 0.28
PDS5A-201ENST00000303538 LAG3P18627 525 aa16.77■□□□□ 0.28
PDS5A-201ENST00000303538 CCNA2P20248 432 aa16.77■□□□□ 0.28
PDS5A-201ENST00000303538 PTPN5P54829 565 aa16.77■□□□□ 0.28
PDS5A-201ENST00000303538 SP2Q02086 613 aa16.77■□□□□ 0.28
PDS5A-201ENST00000303538 ADRM1Q16186 407 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms