RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 CACNA1IQ9P0X4 2223 aa9.53□□□□□ -0.88
RFX3-201ENST00000302303 FAM86C2PA6NEL3 165 aa9.52□□□□□ -0.88
RFX3-201ENST00000302303 MROH6A6NGR9 719 aa9.52□□□□□ -0.88
RFX3-201ENST00000302303 UPK3BL1B0FP48 263 aa9.52□□□□□ -0.88
RFX3-201ENST00000302303 UPK3BL2E5RIL1 263 aa9.52□□□□□ -0.88
RFX3-201ENST00000302303 E7EVH7 732 aa9.52□□□□□ -0.88
RFX3-201ENST00000302303 C1QTNF3-AMACRE9PGA6 284 aa9.52□□□□□ -0.88
RFX3-201ENST00000302303 FGF1P05230 155 aa9.52□□□□□ -0.88
RFX3-201ENST00000302303 FAM153BP0C7A2 387 aa9.52□□□□□ -0.88
RFX3-201ENST00000302303 TNFRSF8P28908 595 aa9.52□□□□□ -0.88
RFX3-201ENST00000302303 AVPR2P30518 371 aa9.52□□□□□ -0.88
RFX3-201ENST00000302303 ACSL1P33121 698 aa9.52□□□□□ -0.88
RFX3-201ENST00000302303 MMP12P39900 470 aa9.52□□□□□ -0.88
RFX3-201ENST00000302303 GRIA4P48058 902 aa9.52□□□□□ -0.88
RFX3-201ENST00000302303 VSNL1P62760 191 aa9.52□□□□□ -0.88
RFX3-201ENST00000302303 CRADDP78560 199 aa9.52□□□□□ -0.88
RFX3-201ENST00000302303 CDH17Q12864 832 aa9.52□□□□□ -0.88
RFX3-201ENST00000302303 PTPRCAPQ14761 206 aa9.52□□□□□ -0.88
RFX3-201ENST00000302303 FASTKD3Q14CZ7 662 aaKnown RBP9.52□□□□□ -0.88
RFX3-201ENST00000302303 MAP7D1Q3KQU3 841 aa9.52□□□□□ -0.88
RFX3-201ENST00000302303 FAM153CQ494X1 144 aa9.52□□□□□ -0.88
RFX3-201ENST00000302303 UBAP2Q5T6F2 1119 aaKnown RBP9.52□□□□□ -0.88
RFX3-201ENST00000302303 FAM46CQ5VWP2 391 aa9.52□□□□□ -0.88
RFX3-201ENST00000302303 ANO7Q6IWH7 933 aa9.52□□□□□ -0.88
RFX3-201ENST00000302303 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.52□□□□□ -0.88
RFX3-201ENST00000302303 CCNI2Q6ZMN8 369 aaPredicted RBP9.52□□□□□ -0.88
RFX3-201ENST00000302303 RFLNAQ6ZTI6 216 aa9.52□□□□□ -0.88
RFX3-201ENST00000302303 USP30Q70CQ3 517 aa9.52□□□□□ -0.88
RFX3-201ENST00000302303 LINC00523Q86TU6 105 aa9.52□□□□□ -0.88
RFX3-201ENST00000302303 TTC7BQ86TV6 843 aa9.52□□□□□ -0.88
RFX3-201ENST00000302303 ZCCHC9Q8N567 271 aaKnown RBP9.52□□□□□ -0.88
RFX3-201ENST00000302303 CAMKK1Q8N5S9 505 aa9.52□□□□□ -0.88
RFX3-201ENST00000302303 HMGB4Q8WW32 186 aa9.52□□□□□ -0.88
RFX3-201ENST00000302303 NELL1Q92832 810 aa9.52□□□□□ -0.88
RFX3-201ENST00000302303 IFT43Q96FT9 208 aa9.52□□□□□ -0.88
RFX3-201ENST00000302303 FSD1LQ9BXM9 530 aa9.52□□□□□ -0.88
RFX3-201ENST00000302303 PARD6BQ9BYG5 372 aa9.52□□□□□ -0.88
RFX3-201ENST00000302303 TXLNGYQ9BZA5 131 aa9.52□□□□□ -0.88
RFX3-201ENST00000302303 MAGEE1Q9HCI5 957 aa9.52□□□□□ -0.88
RFX3-201ENST00000302303 POLMQ9NP87 494 aaPredicted RBP9.52□□□□□ -0.88
RFX3-201ENST00000302303 FAM114A2Q9NRY5 505 aa9.52□□□□□ -0.88
RFX3-201ENST00000302303 FBXL12Q9NXK8 326 aa9.52□□□□□ -0.88
RFX3-201ENST00000302303 B4GALT6Q9UBX8 382 aa9.52□□□□□ -0.88
RFX3-201ENST00000302303 NFU1Q9UMS0 254 aa9.52□□□□□ -0.88
RFX3-201ENST00000302303 SCML1Q9UN30 329 aa9.52□□□□□ -0.88
RFX3-201ENST00000302303 KCTD3Q9Y597 815 aa9.52□□□□□ -0.88
RFX3-201ENST00000302303 MYLKQ15746 1914 aa9.52□□□□□ -0.89
RFX3-201ENST00000302303 ZDBF2Q9HCK1 2354 aa9.52□□□□□ -0.89
RFX3-201ENST00000302303 A0A1W2PQ67 120 aa9.51□□□□□ -0.89
RFX3-201ENST00000302303 CAPN8A6NHC0 703 aa9.51□□□□□ -0.89
RFX3-201ENST00000302303 A8MX80 341 aa9.51□□□□□ -0.89
RFX3-201ENST00000302303 SMAPO00193 183 aa9.51□□□□□ -0.89
RFX3-201ENST00000302303 PLRG1O43660 514 aaKnown RBP9.51□□□□□ -0.89
RFX3-201ENST00000302303 AP1G1O43747 822 aa9.51□□□□□ -0.89
RFX3-201ENST00000302303 RNASEH1O60930 286 aaKnown RBP9.51□□□□□ -0.89
RFX3-201ENST00000302303 PPFIA2O75334 1257 aa9.51□□□□□ -0.89
RFX3-201ENST00000302303 APBB3O95704 486 aa9.51□□□□□ -0.89
RFX3-201ENST00000302303 MGAT1P26572 445 aa9.51□□□□□ -0.89
RFX3-201ENST00000302303 CCR3P51677 355 aa9.51□□□□□ -0.89
RFX3-201ENST00000302303 NEK3P51956 506 aa9.51□□□□□ -0.89
RFX3-201ENST00000302303 TUBB4BP68371 445 aa9.51□□□□□ -0.89
RFX3-201ENST00000302303 DHX9Q08211 1270 aaKnown RBP9.51□□□□□ -0.89
RFX3-201ENST00000302303 FGL2Q14314 439 aa9.51□□□□□ -0.89
RFX3-201ENST00000302303 TMEM52BQ4KMG9 183 aa9.51□□□□□ -0.89
RFX3-201ENST00000302303 WDR93Q6P2C0 686 aa9.51□□□□□ -0.89
RFX3-201ENST00000302303 LIPIQ6XZB0 460 aa9.51□□□□□ -0.89
RFX3-201ENST00000302303 DPPA4Q7L190 304 aa9.51□□□□□ -0.89
RFX3-201ENST00000302303 TMC3Q7Z5M5 1100 aa9.51□□□□□ -0.89
RFX3-201ENST00000302303 C1orf210Q8IVY1 113 aa9.51□□□□□ -0.89
RFX3-201ENST00000302303 GSPT2Q8IYD1 628 aaKnown RBP9.51□□□□□ -0.89
RFX3-201ENST00000302303 FAM160A2Q8N612 972 aaPredicted RBP9.51□□□□□ -0.89
RFX3-201ENST00000302303 EIF1ADQ8N9N8 165 aaKnown RBP9.51□□□□□ -0.89
RFX3-201ENST00000302303 DTWD2Q8NBA8 298 aa9.51□□□□□ -0.89
RFX3-201ENST00000302303 BBOF1Q8ND07 529 aa9.51□□□□□ -0.89
RFX3-201ENST00000302303 TSTD1Q8NFU3 115 aa9.51□□□□□ -0.89
RFX3-201ENST00000302303 BRSK1Q8TDC3 778 aa9.51□□□□□ -0.89
RFX3-201ENST00000302303 RLN3Q8WXF3 142 aa9.51□□□□□ -0.89
RFX3-201ENST00000302303 IFT81Q8WYA0 676 aa9.51□□□□□ -0.89
RFX3-201ENST00000302303 UBXN4Q92575 508 aa9.51□□□□□ -0.89
RFX3-201ENST00000302303 FUBP1Q96AE4 644 aaKnown RBP9.51□□□□□ -0.89
RFX3-201ENST00000302303 RMDN1Q96DB5 314 aa9.51□□□□□ -0.89
RFX3-201ENST00000302303 ADGRE3Q9BY15 652 aa9.51□□□□□ -0.89
RFX3-201ENST00000302303 TPSD1Q9BZJ3 242 aa9.51□□□□□ -0.89
RFX3-201ENST00000302303 SYBUQ9NX95 663 aa9.51□□□□□ -0.89
RFX3-201ENST00000302303 RAB21Q9UL25 225 aa9.51□□□□□ -0.89
RFX3-201ENST00000302303 FZD4Q9ULV1 537 aa9.51□□□□□ -0.89
RFX3-201ENST00000302303 ZFR2Q9UPR6 939 aaKnown RBP9.51□□□□□ -0.89
RFX3-201ENST00000302303 ARL5AQ9Y689 179 aa9.51□□□□□ -0.89
RFX3-201ENST00000302303 TEX264Q9Y6I9 313 aa9.51□□□□□ -0.89
RFX3-201ENST00000302303 VPS13AQ96RL7 3174 aa9.51□□□□□ -0.89
RFX3-201ENST00000302303 NUMA1Q14980 2115 aa9.51□□□□□ -0.89
RFX3-201ENST00000302303 IGHV1OR15-9A0A0B4J2B8 117 aa9.51□□□□□ -0.89
RFX3-201ENST00000302303 GOLGA6CA6NDK9 693 aa9.51□□□□□ -0.89
RFX3-201ENST00000302303 GOLGA6BA6NDN3 693 aa9.51□□□□□ -0.89
RFX3-201ENST00000302303 GAPDHSO14556 408 aaPredicted RBP9.51□□□□□ -0.89
RFX3-201ENST00000302303 RNASEH2AO75792 299 aaKnown RBP9.51□□□□□ -0.89
RFX3-201ENST00000302303 CLDN7O95471 211 aa9.51□□□□□ -0.89
RFX3-201ENST00000302303 DNTTP04053 509 aa9.51□□□□□ -0.89
RFX3-201ENST00000302303 C1SP09871 688 aa9.51□□□□□ -0.89
RFX3-201ENST00000302303 GOLGA6DP0CG33 693 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms