RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 RPS6KA3P51812 740 aa13.36□□□□□ -0.27
CASC4-201ENST00000299957 CDC42EP1Q00587 391 aa13.36□□□□□ -0.27
CASC4-201ENST00000299957 CCNIQ14094 377 aa13.36□□□□□ -0.27
CASC4-201ENST00000299957 ACBD5Q5T8D3 534 aaPredicted RBP13.36□□□□□ -0.27
CASC4-201ENST00000299957 ATP6V0D2Q8N8Y2 350 aa13.36□□□□□ -0.27
CASC4-201ENST00000299957 ATG16L2Q8NAA4 619 aa13.36□□□□□ -0.27
CASC4-201ENST00000299957 ITFG1Q8TB96 612 aa13.36□□□□□ -0.27
CASC4-201ENST00000299957 HSPBAP1Q96EW2 488 aa13.36□□□□□ -0.27
CASC4-201ENST00000299957 ASPSCR1Q9BZE9 553 aa13.36□□□□□ -0.27
CASC4-201ENST00000299957 SLC39A8Q9C0K1 460 aa13.36□□□□□ -0.27
CASC4-201ENST00000299957 RIBC2Q9H4K1 309 aa13.36□□□□□ -0.27
CASC4-201ENST00000299957 COL18A1P39060 1754 aa13.35□□□□□ -0.27
CASC4-201ENST00000299957 C10orf71Q711Q0 1435 aa13.35□□□□□ -0.27
CASC4-201ENST00000299957 NUP205Q92621 2012 aa13.35□□□□□ -0.27
CASC4-201ENST00000299957 A0A1W2PQH9 124 aa13.35□□□□□ -0.27
CASC4-201ENST00000299957 SERPIND1P05546 499 aa13.35□□□□□ -0.27
CASC4-201ENST00000299957 IL4RP24394 825 aa13.35□□□□□ -0.27
CASC4-201ENST00000299957 C21orf59P57076 290 aa13.35□□□□□ -0.27
CASC4-201ENST00000299957 TLR1Q15399 786 aa13.35□□□□□ -0.27
CASC4-201ENST00000299957 CPSF6Q16630 551 aaKnown RBP eCLIP13.35□□□□□ -0.271e-6■■■■□ 25
CASC4-201ENST00000299957 FSCN1Q16658 493 aaKnown RBP13.35□□□□□ -0.27
CASC4-201ENST00000299957 POM121L1PQ3SYA9 428 aa13.35□□□□□ -0.27
CASC4-201ENST00000299957 GPR142Q7Z601 462 aa13.35□□□□□ -0.27
CASC4-201ENST00000299957 ACTRT2Q8TDY3 377 aa13.35□□□□□ -0.27
CASC4-201ENST00000299957 PSMG2Q969U7 264 aa13.35□□□□□ -0.27
CASC4-201ENST00000299957 AGO3Q9H9G7 860 aaKnown RBP13.35□□□□□ -0.27
CASC4-201ENST00000299957 TBC1D13Q9NVG8 400 aa13.35□□□□□ -0.27
CASC4-201ENST00000299957 EXD2Q9NVH0 621 aa13.35□□□□□ -0.27
CASC4-201ENST00000299957 DNAJC28Q9NX36 388 aa13.35□□□□□ -0.27
CASC4-201ENST00000299957 PCDHGC4Q9Y5F7 938 aa13.35□□□□□ -0.27
CASC4-201ENST00000299957 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.35□□□□□ -0.27
CASC4-201ENST00000299957 AZIN1O14977 448 aa13.35□□□□□ -0.27
CASC4-201ENST00000299957 RGS5O15539 181 aa13.35□□□□□ -0.27
CASC4-201ENST00000299957 MLNP12872 115 aa13.35□□□□□ -0.27
CASC4-201ENST00000299957 AOC1P19801 751 aa13.35□□□□□ -0.27
CASC4-201ENST00000299957 RAP1GDS1P52306 607 aa13.35□□□□□ -0.27
CASC4-201ENST00000299957 NAA20P61599 178 aa13.35□□□□□ -0.27
CASC4-201ENST00000299957 SOX4Q06945 474 aaPredicted RBP13.35□□□□□ -0.27
CASC4-201ENST00000299957 ZNF177Q13360 481 aaPredicted RBP13.35□□□□□ -0.27
CASC4-201ENST00000299957 CAMK1DQ8IU85 385 aa13.35□□□□□ -0.27
CASC4-201ENST00000299957 SLC22A9Q8IVM8 553 aa13.35□□□□□ -0.27
CASC4-201ENST00000299957 APLFQ8IW19 511 aaPredicted RBP13.35□□□□□ -0.27
CASC4-201ENST00000299957 TEKT5Q96M29 485 aa13.35□□□□□ -0.27
CASC4-201ENST00000299957 FAM105AQ9NUU6 356 aa13.35□□□□□ -0.27
CASC4-201ENST00000299957 FADS3Q9Y5Q0 445 aa13.35□□□□□ -0.27
CASC4-201ENST00000299957 SIPA1L3O60292 1781 aaPredicted RBP13.35□□□□□ -0.27
CASC4-201ENST00000299957 UTRNP46939 3433 aa13.35□□□□□ -0.27
CASC4-201ENST00000299957 A0A087WXM4 84 aa13.35□□□□□ -0.27
CASC4-201ENST00000299957 MGEA5O60502 916 aa13.35□□□□□ -0.27
CASC4-201ENST00000299957 RAB27AP51159 221 aa13.35□□□□□ -0.27
CASC4-201ENST00000299957 OXCT1P55809 520 aa13.35□□□□□ -0.27
CASC4-201ENST00000299957 DAOAP59103 153 aa13.35□□□□□ -0.27
CASC4-201ENST00000299957 COL9A2Q14055 689 aaPredicted RBP13.35□□□□□ -0.27
CASC4-201ENST00000299957 TNFAIP8L3Q5GJ75 292 aa13.35□□□□□ -0.27
CASC4-201ENST00000299957 FAM219BQ5XKK7 198 aa13.35□□□□□ -0.27
CASC4-201ENST00000299957 PGAM4Q8N0Y7 254 aa13.35□□□□□ -0.27
CASC4-201ENST00000299957 GPC2Q8N158 579 aa13.35□□□□□ -0.27
CASC4-201ENST00000299957 PHC3Q8NDX5 983 aa13.35□□□□□ -0.27
CASC4-201ENST00000299957 GBA3Q9H227 469 aa13.35□□□□□ -0.27
CASC4-201ENST00000299957 ADAM28Q9UKQ2 775 aa13.35□□□□□ -0.27
CASC4-201ENST00000299957 PRPF19Q9UMS4 504 aaKnown RBP13.35□□□□□ -0.27
CASC4-201ENST00000299957 PRRG1O14668 218 aa13.34□□□□□ -0.27
CASC4-201ENST00000299957 PIP5K1BO14986 540 aa13.34□□□□□ -0.27
CASC4-201ENST00000299957 JUNP05412 331 aaKnown RBP13.34□□□□□ -0.27
CASC4-201ENST00000299957 MMP3P08254 477 aa13.34□□□□□ -0.27
CASC4-201ENST00000299957 CEACAM7Q14002 265 aa13.34□□□□□ -0.27
CASC4-201ENST00000299957 ZYG11AQ6WRX3 759 aa13.34□□□□□ -0.27
CASC4-201ENST00000299957 GALNT5Q7Z7M9 940 aa13.34□□□□□ -0.27
CASC4-201ENST00000299957 P3H2Q8IVL5 708 aa13.34□□□□□ -0.27
CASC4-201ENST00000299957 KIAA2013Q8IYS2 634 aa13.34□□□□□ -0.27
CASC4-201ENST00000299957 CENPLQ8N0S6 344 aaPredicted RBP13.34□□□□□ -0.27
CASC4-201ENST00000299957 OR4K2Q8NGD2 314 aa13.34□□□□□ -0.27
CASC4-201ENST00000299957 OR13C4Q8NGS5 318 aa13.34□□□□□ -0.27
CASC4-201ENST00000299957 RSPH1Q8WYR4 309 aa13.34□□□□□ -0.27
CASC4-201ENST00000299957 TPD52L3Q96J77 140 aa13.34□□□□□ -0.27
CASC4-201ENST00000299957 SNX27Q96L92 541 aa13.34□□□□□ -0.27
CASC4-201ENST00000299957 VAT1Q99536 393 aa13.34□□□□□ -0.27
CASC4-201ENST00000299957 PAAF1Q9BRP4 392 aa13.34□□□□□ -0.27
CASC4-201ENST00000299957 MYO10Q9HD67 2058 aa13.34□□□□□ -0.27
CASC4-201ENST00000299957 TMEM114B3SHH9 223 aa13.34□□□□□ -0.27
CASC4-201ENST00000299957 AXIN1O15169 862 aa13.34□□□□□ -0.27
CASC4-201ENST00000299957 TRPC1P48995 793 aa13.34□□□□□ -0.27
CASC4-201ENST00000299957 CREB5Q02930 508 aa13.34□□□□□ -0.27
CASC4-201ENST00000299957 ARHGAP1Q07960 439 aa13.34□□□□□ -0.27
CASC4-201ENST00000299957 BOP1Q14137 746 aaKnown RBP13.34□□□□□ -0.27
CASC4-201ENST00000299957 ADGRE1Q14246 886 aa13.34□□□□□ -0.27
CASC4-201ENST00000299957 REP15Q6BDI9 236 aa13.34□□□□□ -0.27
CASC4-201ENST00000299957 KLHDC10Q6PID8 442 aa13.34□□□□□ -0.27
CASC4-201ENST00000299957 XKR5Q6UX68 686 aa13.34□□□□□ -0.27
CASC4-201ENST00000299957 CACUL1Q86Y37 369 aa13.34□□□□□ -0.27
CASC4-201ENST00000299957 DCP1BQ8IZD4 617 aaKnown RBP13.34□□□□□ -0.27
CASC4-201ENST00000299957 C19orf60Q96EN9 201 aa13.34□□□□□ -0.27
CASC4-201ENST00000299957 KATNAL1Q9BW62 490 aa13.34□□□□□ -0.27
CASC4-201ENST00000299957 CLPBQ9H078 707 aa13.34□□□□□ -0.27
CASC4-201ENST00000299957 SCUBE2Q9NQ36 999 aa13.34□□□□□ -0.27
CASC4-201ENST00000299957 CNGB3Q9NQW8 809 aa13.34□□□□□ -0.27
CASC4-201ENST00000299957 OXSMQ9NWU1 459 aa13.34□□□□□ -0.27
CASC4-201ENST00000299957 FETUBQ9UGM5 382 aa13.34□□□□□ -0.27
CASC4-201ENST00000299957 ANAPC2Q9UJX6 822 aa13.34□□□□□ -0.27
CASC4-201ENST00000299957 ANKRD6Q9Y2G4 727 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms