RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 ERVH48-1M5A8F1 160 aa21.28■■□□□ 1
SMCO4-201ENST00000298966 STK10O94804 968 aaKnown RBP21.28■■□□□ 1
SMCO4-201ENST00000298966 CKMT2P17540 419 aa21.28■■□□□ 1
SMCO4-201ENST00000298966 MAPKAPK2P49137 400 aa21.28■■□□□ 1
SMCO4-201ENST00000298966 GBE1Q04446 702 aa21.28■■□□□ 1
SMCO4-201ENST00000298966 CST6Q15828 149 aa21.28■■□□□ 1
SMCO4-201ENST00000298966 TBC1D25Q3MII6 688 aa21.28■■□□□ 1
SMCO4-201ENST00000298966 RABGAP1LQ5R372 815 aa21.28■■□□□ 1
SMCO4-201ENST00000298966 RWDD4Q6NW29 188 aaKnown RBP21.28■■□□□ 1
SMCO4-201ENST00000298966 PCSK4Q6UW60 755 aa21.28■■□□□ 1
SMCO4-201ENST00000298966 PCGF5Q86SE9 256 aa21.28■■□□□ 1
SMCO4-201ENST00000298966 CHSY1Q86X52 802 aa21.28■■□□□ 1
SMCO4-201ENST00000298966 ZNF683Q8IZ20 524 aa21.28■■□□□ 1
SMCO4-201ENST00000298966 TFB1MQ8WVM0 346 aaKnown RBP21.28■■□□□ 1
SMCO4-201ENST00000298966 IFT81Q8WYA0 676 aa21.28■■□□□ 1
SMCO4-201ENST00000298966 SNF8Q96H20 258 aa21.28■■□□□ 1
SMCO4-201ENST00000298966 LGMNQ99538 433 aa21.28■■□□□ 1
SMCO4-201ENST00000298966 TSPYL1Q9H0U9 437 aa21.28■■□□□ 1
SMCO4-201ENST00000298966 TMEM248Q9NWD8 314 aa21.28■■□□□ 1
SMCO4-201ENST00000298966 SAE1Q9UBE0 346 aaPredicted RBP21.28■■□□□ 1
SMCO4-201ENST00000298966 SERGEFQ9UGK8 458 aa21.28■■□□□ 1
SMCO4-201ENST00000298966 NEU3Q9UQ49 428 aa21.28■■□□□ 1
SMCO4-201ENST00000298966 MID1O15344 667 aa21.27■■□□□ 1
SMCO4-201ENST00000298966 MFSD11O43934 449 aa21.27■■□□□ 1
SMCO4-201ENST00000298966 SIN3BO75182 1162 aa21.27■■□□□ 1
SMCO4-201ENST00000298966 RNASEH2AO75792 299 aaKnown RBP21.27■■□□□ 1
SMCO4-201ENST00000298966 TACR2P21452 398 aa21.27■■□□□ 1
SMCO4-201ENST00000298966 CD70P32970 193 aa21.27■■□□□ 1
SMCO4-201ENST00000298966 CCR5P51681 352 aa21.27■■□□□ 1
SMCO4-201ENST00000298966 NDST2P52849 883 aa21.27■■□□□ 1
SMCO4-201ENST00000298966 GALNT2Q10471 571 aa21.27■■□□□ 1
SMCO4-201ENST00000298966 BNIP3Q12983 259 aa21.27■■□□□ 1
SMCO4-201ENST00000298966 P3H1Q32P28 736 aa21.27■■□□□ 1
SMCO4-201ENST00000298966 NPNTQ6UXI9 565 aa21.27■■□□□ 1
SMCO4-201ENST00000298966 CEP128Q6ZU80 1094 aa21.27■■□□□ 1
SMCO4-201ENST00000298966 ZC3H18Q86VM9 953 aaKnown RBP21.27■■□□□ 1
SMCO4-201ENST00000298966 HDAC11Q96DB2 347 aa21.27■■□□□ 1
SMCO4-201ENST00000298966 TMEM121Q9BTD3 319 aa21.27■■□□□ 1
SMCO4-201ENST00000298966 FOXP3Q9BZS1 431 aa21.27■■□□□ 1
SMCO4-201ENST00000298966 NEUROG2Q9H2A3 272 aa21.27■■□□□ 1
SMCO4-201ENST00000298966 ETNK2Q9NVF9 386 aa21.27■■□□□ 1
SMCO4-201ENST00000298966 FZD4Q9ULV1 537 aa21.27■■□□□ 1
SMCO4-201ENST00000298966 TPX2Q9ULW0 747 aaKnown RBP21.27■■□□□ 1
SMCO4-201ENST00000298966 NFU1Q9UMS0 254 aa21.27■■□□□ 1
SMCO4-201ENST00000298966 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP21.26■□□□□ 0.99
SMCO4-201ENST00000298966 TLR4O00206 839 aa21.26■□□□□ 0.99
SMCO4-201ENST00000298966 TBL1XO60907 577 aa21.26■□□□□ 0.99
SMCO4-201ENST00000298966 SEC31AO94979 1220 aaKnown RBP21.26■□□□□ 0.99
SMCO4-201ENST00000298966 ASLP04424 464 aa21.26■□□□□ 0.99
SMCO4-201ENST00000298966 ECHS1P30084 290 aa21.26■□□□□ 0.99
SMCO4-201ENST00000298966 RXRGP48443 463 aa21.26■□□□□ 0.99
SMCO4-201ENST00000298966 NXPH1P58417 271 aa21.26■□□□□ 0.99
SMCO4-201ENST00000298966 HLTFQ14527 1009 aaKnown RBP eCLIP21.26■□□□□ 0.99
SMCO4-201ENST00000298966 PRKD1Q15139 912 aaPredicted RBP21.26■□□□□ 0.99
SMCO4-201ENST00000298966 HNRNPA1L2Q32P51 320 aaKnown RBP21.26■□□□□ 0.99
SMCO4-201ENST00000298966 MPP7Q5T2T1 576 aa21.26■□□□□ 0.99
SMCO4-201ENST00000298966 RAP1GAP2Q684P5 730 aa21.26■□□□□ 0.99
SMCO4-201ENST00000298966 HDXQ7Z353 690 aa21.26■□□□□ 0.99
SMCO4-201ENST00000298966 UMODL1-AS1Q8N2C9 162 aa21.26■□□□□ 0.99
SMCO4-201ENST00000298966 ZNF248Q8NDW4 579 aa21.26■□□□□ 0.99
SMCO4-201ENST00000298966 WFDC5Q8TCV5 224 aa21.26■□□□□ 0.99
SMCO4-201ENST00000298966 SERAC1Q96JX3 654 aa21.26■□□□□ 0.99
SMCO4-201ENST00000298966 VAT1Q99536 393 aa21.26■□□□□ 0.99
SMCO4-201ENST00000298966 FAM118BQ9BPY3 351 aa21.26■□□□□ 0.99
SMCO4-201ENST00000298966 DPH5Q9H2P9 285 aa21.26■□□□□ 0.99
SMCO4-201ENST00000298966 ERVMER34-1Q9H9K5 563 aa21.26■□□□□ 0.99
SMCO4-201ENST00000298966 PAK5Q9P286 719 aa21.26■□□□□ 0.99
SMCO4-201ENST00000298966 MTRF1LQ9UGC7 380 aaKnown RBP21.26■□□□□ 0.99
SMCO4-201ENST00000298966 XPO7Q9UIA9 1087 aaKnown RBP21.26■□□□□ 0.99
SMCO4-201ENST00000298966 VANGL2Q9ULK5 521 aa21.26■□□□□ 0.99
SMCO4-201ENST00000298966 CHD5Q8TDI0 1954 aa21.26■□□□□ 0.99
SMCO4-201ENST00000298966 WNT9AO14904 365 aa21.25■□□□□ 0.99
SMCO4-201ENST00000298966 ADCY8P40145 1251 aa21.25■□□□□ 0.99
SMCO4-201ENST00000298966 RPL21P46778 160 aaKnown RBP21.25■□□□□ 0.99
SMCO4-201ENST00000298966 SGSHP51688 502 aa21.25■□□□□ 0.99
SMCO4-201ENST00000298966 YBEYP58557 167 aaPredicted RBP21.25■□□□□ 0.99
SMCO4-201ENST00000298966 RHDQ02161 417 aa21.25■□□□□ 0.99
SMCO4-201ENST00000298966 PPIDQ08752 370 aaKnown RBP21.25■□□□□ 0.99
SMCO4-201ENST00000298966 SLC10A2Q12908 348 aaPredicted RBP21.25■□□□□ 0.99
SMCO4-201ENST00000298966 TRADDQ15628 312 aa21.25■□□□□ 0.99
SMCO4-201ENST00000298966 BROXQ5VW32 411 aa21.25■□□□□ 0.99
SMCO4-201ENST00000298966 FBXL22Q6P050 247 aa21.25■□□□□ 0.99
SMCO4-201ENST00000298966 NLRP14Q86W24 1093 aa21.25■□□□□ 0.99
SMCO4-201ENST00000298966 MMAAQ8IVH4 418 aaKnown RBP21.25■□□□□ 0.99
SMCO4-201ENST00000298966 GSPT2Q8IYD1 628 aaKnown RBP21.25■□□□□ 0.99
SMCO4-201ENST00000298966 DCBLD1Q8N8Z6 715 aa21.25■□□□□ 0.99
SMCO4-201ENST00000298966 FATE1Q969F0 183 aa21.25■□□□□ 0.99
SMCO4-201ENST00000298966 WBP1Q96G27 269 aa21.25■□□□□ 0.99
SMCO4-201ENST00000298966 MYO19Q96H55 970 aa21.25■□□□□ 0.99
SMCO4-201ENST00000298966 RPRD1AQ96P16 312 aaPredicted RBP21.25■□□□□ 0.99
SMCO4-201ENST00000298966 TSGA13Q96PP4 275 aa21.25■□□□□ 0.99
SMCO4-201ENST00000298966 FUT8Q9BYC5 575 aa21.25■□□□□ 0.99
SMCO4-201ENST00000298966 USP29Q9HBJ7 922 aa21.25■□□□□ 0.99
SMCO4-201ENST00000298966 GRHL1Q9NZI5 618 aa21.25■□□□□ 0.99
SMCO4-201ENST00000298966 SNX10Q9Y5X0 201 aa21.25■□□□□ 0.99
SMCO4-201ENST00000298966 SPTA1P02549 2419 aa21.25■□□□□ 0.99
SMCO4-201ENST00000298966 TYW5A2RUC4 315 aaKnown RBP21.24■□□□□ 0.99
SMCO4-201ENST00000298966 C5orf60A6NFR6 353 aa21.24■□□□□ 0.99
SMCO4-201ENST00000298966 IFNB1P01574 187 aa21.24■□□□□ 0.99
SMCO4-201ENST00000298966 SLC8A1P32418 973 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms