RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 TEX26Q8N6G2 289 aa12.18□□□□□ -0.46
HMGB2-201ENST00000296503 MFSD2AQ8NA29 543 aa12.18□□□□□ -0.46
HMGB2-201ENST00000296503 HDAC11Q96DB2 347 aa12.18□□□□□ -0.46
HMGB2-201ENST00000296503 MGME1Q9BQP7 344 aa12.18□□□□□ -0.46
HMGB2-201ENST00000296503 HEMGNQ9BXL5 484 aa12.18□□□□□ -0.46
HMGB2-201ENST00000296503 POLR1EQ9GZS1 481 aaKnown RBP12.18□□□□□ -0.46
HMGB2-201ENST00000296503 FZD3Q9NPG1 666 aa12.18□□□□□ -0.46
HMGB2-201ENST00000296503 CA5BQ9Y2D0 317 aa12.18□□□□□ -0.46
HMGB2-201ENST00000296503 GRID2IPA4D2P6 1211 aa12.17□□□□□ -0.46
HMGB2-201ENST00000296503 UPK3BL1B0FP48 263 aa12.17□□□□□ -0.46
HMGB2-201ENST00000296503 UPK3BL2E5RIL1 263 aa12.17□□□□□ -0.46
HMGB2-201ENST00000296503 TLR4O00206 839 aa12.17□□□□□ -0.46
HMGB2-201ENST00000296503 PPP1R12AO14974 1030 aaPredicted RBP12.17□□□□□ -0.46
HMGB2-201ENST00000296503 AREL1O15033 823 aa12.17□□□□□ -0.46
HMGB2-201ENST00000296503 KRT86O43790 486 aa12.17□□□□□ -0.46
HMGB2-201ENST00000296503 KIF1CO43896 1103 aaKnown RBP12.17□□□□□ -0.46
HMGB2-201ENST00000296503 MAGEC1O60732 1142 aa12.17□□□□□ -0.46
HMGB2-201ENST00000296503 PRKCGP05129 697 aa12.17□□□□□ -0.46
HMGB2-201ENST00000296503 HNRNPA2B1P22626 353 aaKnown RBP12.17□□□□□ -0.46
HMGB2-201ENST00000296503 CTNNA1P35221 906 aaKnown RBP12.17□□□□□ -0.46
HMGB2-201ENST00000296503 NR2C2P49116 596 aa12.17□□□□□ -0.46
HMGB2-201ENST00000296503 RWDD2BP57060 319 aa12.17□□□□□ -0.46
HMGB2-201ENST00000296503 TMEM259Q4ZIN3 620 aa12.17□□□□□ -0.46
HMGB2-201ENST00000296503 RALGPS1Q5JS13 557 aa12.17□□□□□ -0.46
HMGB2-201ENST00000296503 PRAMEF14Q5SWL7 426 aa12.17□□□□□ -0.46
HMGB2-201ENST00000296503 CCDC181Q5TID7 509 aa12.17□□□□□ -0.46
HMGB2-201ENST00000296503 MAML1Q92585 1016 aa12.17□□□□□ -0.46
HMGB2-201ENST00000296503 P3H4Q92791 437 aa12.17□□□□□ -0.46
HMGB2-201ENST00000296503 KLHDC7BQ96G42 594 aa12.17□□□□□ -0.46
HMGB2-201ENST00000296503 NSMCE3Q96MG7 304 aa12.17□□□□□ -0.46
HMGB2-201ENST00000296503 SEMA3CQ99985 751 aa12.17□□□□□ -0.46
HMGB2-201ENST00000296503 WRAP53Q9BUR4 548 aaKnown RBP12.17□□□□□ -0.46
HMGB2-201ENST00000296503 PCDH12Q9NPG4 1184 aa12.17□□□□□ -0.46
HMGB2-201ENST00000296503 SEPT10Q9P0V9 454 aa12.17□□□□□ -0.46
HMGB2-201ENST00000296503 SAE1Q9UBE0 346 aaPredicted RBP12.17□□□□□ -0.46
HMGB2-201ENST00000296503 GUCA1BQ9UMX6 200 aa12.17□□□□□ -0.46
HMGB2-201ENST00000296503 PLXNA2O75051 1894 aa12.17□□□□□ -0.46
HMGB2-201ENST00000296503 hCG_1818297A0A087WSY0 165 aa12.17□□□□□ -0.46
HMGB2-201ENST00000296503 A0A1W2PR77 199 aa12.17□□□□□ -0.46
HMGB2-201ENST00000296503 TSPAN11A1L157 253 aa12.17□□□□□ -0.46
HMGB2-201ENST00000296503 KCNK1O00180 336 aa12.17□□□□□ -0.46
HMGB2-201ENST00000296503 TRAFD1O14545 582 aaPredicted RBP12.17□□□□□ -0.46
HMGB2-201ENST00000296503 TM4SF5O14894 197 aa12.17□□□□□ -0.46
HMGB2-201ENST00000296503 TM7SF2O76062 418 aa12.17□□□□□ -0.46
HMGB2-201ENST00000296503 CR2P20023 1033 aa12.17□□□□□ -0.46
HMGB2-201ENST00000296503 CES1P23141 567 aa12.17□□□□□ -0.46
HMGB2-201ENST00000296503 CTNNA2P26232 953 aa12.17□□□□□ -0.46
HMGB2-201ENST00000296503 CTSKP43235 329 aa12.17□□□□□ -0.46
HMGB2-201ENST00000296503 SEMG2Q02383 582 aa12.17□□□□□ -0.46
HMGB2-201ENST00000296503 PPIDQ08752 370 aaKnown RBP12.17□□□□□ -0.46
HMGB2-201ENST00000296503 TAZQ16635 292 aa12.17□□□□□ -0.46
HMGB2-201ENST00000296503 B4GALNT4Q76KP1 1039 aa12.17□□□□□ -0.46
HMGB2-201ENST00000296503 RNF10Q8N5U6 811 aaKnown RBP12.17□□□□□ -0.46
HMGB2-201ENST00000296503 LRRC57Q8N9N7 239 aa12.17□□□□□ -0.46
HMGB2-201ENST00000296503 COG1Q8WTW3 980 aa12.17□□□□□ -0.46
HMGB2-201ENST00000296503 FATE1Q969F0 183 aa12.17□□□□□ -0.46
HMGB2-201ENST00000296503 C1QTNF2Q9BXJ5 285 aa12.17□□□□□ -0.46
HMGB2-201ENST00000296503 TSGA10Q9BZW7 698 aa12.17□□□□□ -0.46
HMGB2-201ENST00000296503 BRD8Q9H0E9 1235 aa12.17□□□□□ -0.46
HMGB2-201ENST00000296503 IL21RQ9HBE5 538 aa12.17□□□□□ -0.46
HMGB2-201ENST00000296503 DNAAF2Q9NVR5 837 aaKnown RBP12.17□□□□□ -0.46
HMGB2-201ENST00000296503 AMACRQ9UHK6 382 aa12.17□□□□□ -0.46
HMGB2-201ENST00000296503 PCDHB9Q9Y5E1 797 aa12.17□□□□□ -0.46
HMGB2-201ENST00000296503 HS3ST3A1Q9Y663 406 aa12.17□□□□□ -0.46
HMGB2-201ENST00000296503 A0A1W2PQ67 120 aa12.16□□□□□ -0.46
HMGB2-201ENST00000296503 A8MX80 341 aa12.16□□□□□ -0.46
HMGB2-201ENST00000296503 SPINT1O43278 529 aa12.16□□□□□ -0.46
HMGB2-201ENST00000296503 TGM2P21980 687 aa12.16□□□□□ -0.46
HMGB2-201ENST00000296503 PEX5P50542 639 aa12.16□□□□□ -0.46
HMGB2-201ENST00000296503 CLDN2P57739 230 aa12.16□□□□□ -0.46
HMGB2-201ENST00000296503 COPS2P61201 443 aa12.16□□□□□ -0.46
HMGB2-201ENST00000296503 ADCY2Q08462 1091 aa12.16□□□□□ -0.46
HMGB2-201ENST00000296503 FGL2Q14314 439 aa12.16□□□□□ -0.46
HMGB2-201ENST00000296503 TMEM52BQ4KMG9 183 aa12.16□□□□□ -0.46
HMGB2-201ENST00000296503 ZNF569Q5MCW4 686 aa12.16□□□□□ -0.46
HMGB2-201ENST00000296503 NT5DC3Q86UY8 548 aa12.16□□□□□ -0.46
HMGB2-201ENST00000296503 IQCHQ86VS3 1027 aa12.16□□□□□ -0.46
HMGB2-201ENST00000296503 ZSWIM9Q86XI8 627 aa12.16□□□□□ -0.46
HMGB2-201ENST00000296503 UBL4BQ8N7F7 174 aa12.16□□□□□ -0.46
HMGB2-201ENST00000296503 HAUS1Q96CS2 278 aa12.16□□□□□ -0.46
HMGB2-201ENST00000296503 ECHDC3Q96DC8 303 aa12.16□□□□□ -0.46
HMGB2-201ENST00000296503 GDF3Q9NR23 364 aa12.16□□□□□ -0.46
HMGB2-201ENST00000296503 TM7SF3Q9NS93 570 aa12.16□□□□□ -0.46
HMGB2-201ENST00000296503 ATP8A1Q9Y2Q0 1164 aa12.16□□□□□ -0.46
HMGB2-201ENST00000296503 PCDH15Q96QU1 1955 aa12.16□□□□□ -0.46
HMGB2-201ENST00000296503 DMXL1Q9Y485 3027 aa12.16□□□□□ -0.46
HMGB2-201ENST00000296503 ASCC3Q8N3C0 2202 aaKnown RBP12.15□□□□□ -0.46
HMGB2-201ENST00000296503 LAMA1P25391 3075 aa12.15□□□□□ -0.46
HMGB2-201ENST00000296503 H0Y8X5 98 aa12.15□□□□□ -0.46
HMGB2-201ENST00000296503 FPGTO14772 594 aa12.15□□□□□ -0.46
HMGB2-201ENST00000296503 LZTS3O60299 673 aaPredicted RBP12.15□□□□□ -0.46
HMGB2-201ENST00000296503 SOCS5O75159 536 aa12.15□□□□□ -0.46
HMGB2-201ENST00000296503 FTCDO95954 541 aa12.15□□□□□ -0.46
HMGB2-201ENST00000296503 HLA-DQB2P05538 268 aa12.15□□□□□ -0.46
HMGB2-201ENST00000296503 THEGLP0DJG4 465 aa12.15□□□□□ -0.46
HMGB2-201ENST00000296503 NFKBIAP25963 317 aa12.15□□□□□ -0.46
HMGB2-201ENST00000296503 DSC2Q02487 901 aa12.15□□□□□ -0.46
HMGB2-201ENST00000296503 CKAP4Q07065 602 aaKnown RBP12.15□□□□□ -0.46
HMGB2-201ENST00000296503 OVGP1Q12889 678 aa12.15□□□□□ -0.46
HMGB2-201ENST00000296503 TRAF2Q12933 501 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms