RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 CCDC187A0A096LP49 1063 aa9.37□□□□□ -0.91
CNOT9-202ENST00000295701 F8VZ95 297 aa9.37□□□□□ -0.91
CNOT9-202ENST00000295701 EPHB6O15197 1021 aa9.37□□□□□ -0.91
CNOT9-202ENST00000295701 NOBOXO60393 691 aa9.37□□□□□ -0.91
CNOT9-202ENST00000295701 RAMP2O60895 175 aa9.37□□□□□ -0.91
CNOT9-202ENST00000295701 TCEA3O75764 348 aa9.37□□□□□ -0.91
CNOT9-202ENST00000295701 LSM8O95777 96 aaKnown RBP9.37□□□□□ -0.91
CNOT9-202ENST00000295701 SLC5A2P31639 672 aa9.37□□□□□ -0.91
CNOT9-202ENST00000295701 RFC1P35251 1148 aaPredicted RBP9.37□□□□□ -0.91
CNOT9-202ENST00000295701 UGT1A5P35504 534 aa9.37□□□□□ -0.91
CNOT9-202ENST00000295701 MAPKAPK2P49137 400 aa9.37□□□□□ -0.91
CNOT9-202ENST00000295701 HK3P52790 923 aa9.37□□□□□ -0.91
CNOT9-202ENST00000295701 YPEL5P62699 121 aa9.37□□□□□ -0.91
CNOT9-202ENST00000295701 NFKB2Q00653 900 aa9.37□□□□□ -0.91
CNOT9-202ENST00000295701 DPCR1Q3MIW9 517 aa9.37□□□□□ -0.91
CNOT9-202ENST00000295701 LINC00303Q3SY05 128 aa9.37□□□□□ -0.91
CNOT9-202ENST00000295701 TMEM52BQ4KMG9 183 aa9.37□□□□□ -0.91
CNOT9-202ENST00000295701 ESRP1Q6NXG1 681 aaKnown RBP9.37□□□□□ -0.91
CNOT9-202ENST00000295701 MACC1Q6ZN28 852 aa9.37□□□□□ -0.91
CNOT9-202ENST00000295701 RAB11FIP2Q7L804 512 aa9.37□□□□□ -0.91
CNOT9-202ENST00000295701 ARCQ7LC44 396 aa9.37□□□□□ -0.91
CNOT9-202ENST00000295701 ZSWIM9Q86XI8 627 aa9.37□□□□□ -0.91
CNOT9-202ENST00000295701 FBXO39Q8N4B4 442 aa9.37□□□□□ -0.91
CNOT9-202ENST00000295701 ARL14Q8N4G2 192 aa9.37□□□□□ -0.91
CNOT9-202ENST00000295701 Q8N9G6 341 aaPredicted RBP9.37□□□□□ -0.91
CNOT9-202ENST00000295701 MLKLQ8NB16 471 aa9.37□□□□□ -0.91
CNOT9-202ENST00000295701 FAM172AQ8WUF8 416 aa9.37□□□□□ -0.91
CNOT9-202ENST00000295701 CENPIQ92674 756 aaPredicted RBP9.37□□□□□ -0.91
CNOT9-202ENST00000295701 HMCESQ96FZ2 354 aa9.37□□□□□ -0.91
CNOT9-202ENST00000295701 MED8Q96G25 268 aa9.37□□□□□ -0.91
CNOT9-202ENST00000295701 GDAP1L1Q96MZ0 367 aa9.37□□□□□ -0.91
CNOT9-202ENST00000295701 APOOQ9BUR5 198 aa9.37□□□□□ -0.91
CNOT9-202ENST00000295701 OSBPL1AQ9BXW6 950 aa9.37□□□□□ -0.91
CNOT9-202ENST00000295701 CPEB1Q9BZB8 566 aaKnown RBP9.37□□□□□ -0.91
CNOT9-202ENST00000295701 EDEM3Q9BZQ6 932 aa9.37□□□□□ -0.91
CNOT9-202ENST00000295701 TRIM4Q9C037 500 aa9.37□□□□□ -0.91
CNOT9-202ENST00000295701 TTYH3Q9C0H2 523 aa9.37□□□□□ -0.91
CNOT9-202ENST00000295701 GANQ9H2C0 597 aa9.37□□□□□ -0.91
CNOT9-202ENST00000295701 EPB41L5Q9HCM4 733 aa9.37□□□□□ -0.91
CNOT9-202ENST00000295701 TAB2Q9NYJ8 693 aa9.37□□□□□ -0.91
CNOT9-202ENST00000295701 NCKIPSDQ9NZQ3 722 aa9.37□□□□□ -0.91
CNOT9-202ENST00000295701 ATXN7L1Q9ULK2 861 aaPredicted RBP9.37□□□□□ -0.91
CNOT9-202ENST00000295701 HPCAL4Q9UM19 191 aa9.37□□□□□ -0.91
CNOT9-202ENST00000295701 GPR34Q9UPC5 381 aa9.37□□□□□ -0.91
CNOT9-202ENST00000295701 DOLKQ9UPQ8 538 aa9.37□□□□□ -0.91
CNOT9-202ENST00000295701 OR1A2Q9Y585 309 aa9.37□□□□□ -0.91
CNOT9-202ENST00000295701 COL12A1Q99715 3063 aa9.37□□□□□ -0.91
CNOT9-202ENST00000295701 SDK2Q58EX2 2172 aa9.36□□□□□ -0.91
CNOT9-202ENST00000295701 LOC100996750A0A140TA64 210 aa9.36□□□□□ -0.91
CNOT9-202ENST00000295701 SLC28A2O43868 658 aa9.36□□□□□ -0.91
CNOT9-202ENST00000295701 BUB1BO60566 1050 aaPredicted RBP9.36□□□□□ -0.91
CNOT9-202ENST00000295701 IGSF6O95976 241 aa9.36□□□□□ -0.91
CNOT9-202ENST00000295701 PCCBP05166 539 aa9.36□□□□□ -0.91
CNOT9-202ENST00000295701 RPLP0P05388 317 aaKnown RBP9.36□□□□□ -0.91
CNOT9-202ENST00000295701 CTSEP14091 401 aa9.36□□□□□ -0.91
CNOT9-202ENST00000295701 ITIH1P19827 911 aa9.36□□□□□ -0.91
CNOT9-202ENST00000295701 MMP8P22894 467 aa9.36□□□□□ -0.91
CNOT9-202ENST00000295701 SDC4P31431 198 aa9.36□□□□□ -0.91
CNOT9-202ENST00000295701 ETFBP38117 255 aa9.36□□□□□ -0.91
CNOT9-202ENST00000295701 ETV5P41161 510 aa9.36□□□□□ -0.91
CNOT9-202ENST00000295701 RHOAP61586 193 aa9.36□□□□□ -0.91
CNOT9-202ENST00000295701 CDR2Q01850 454 aa9.36□□□□□ -0.91
CNOT9-202ENST00000295701 INPP5AQ14642 412 aa9.36□□□□□ -0.91
CNOT9-202ENST00000295701 LRRC14Q15048 493 aa9.36□□□□□ -0.91
CNOT9-202ENST00000295701 WDR59Q6PJI9 974 aa9.36□□□□□ -0.91
CNOT9-202ENST00000295701 STRADAQ7RTN6 431 aa9.36□□□□□ -0.91
CNOT9-202ENST00000295701 TMPRSS9Q7Z410 1059 aa9.36□□□□□ -0.91
CNOT9-202ENST00000295701 ZSCAN30Q86W11 494 aa9.36□□□□□ -0.91
CNOT9-202ENST00000295701 JAMLQ86YT9 394 aa9.36□□□□□ -0.91
CNOT9-202ENST00000295701 PELI3Q8N2H9 469 aa9.36□□□□□ -0.91
CNOT9-202ENST00000295701 ARL10Q8N8L6 244 aa9.36□□□□□ -0.91
CNOT9-202ENST00000295701 PLA2G15Q8NCC3 412 aa9.36□□□□□ -0.91
CNOT9-202ENST00000295701 NAT6Q93015 286 aa9.36□□□□□ -0.91
CNOT9-202ENST00000295701 GRAMD1AQ96CP6 724 aa9.36□□□□□ -0.91
CNOT9-202ENST00000295701 CCDC97Q96F63 343 aaPredicted RBP9.36□□□□□ -0.91
CNOT9-202ENST00000295701 LIN37Q96GY3 246 aaPredicted RBP9.36□□□□□ -0.91
CNOT9-202ENST00000295701 TBATAQ96M53 351 aa9.36□□□□□ -0.91
CNOT9-202ENST00000295701 NSMCE3Q96MG7 304 aa9.36□□□□□ -0.91
CNOT9-202ENST00000295701 GFM1Q96RP9 751 aaKnown RBP9.36□□□□□ -0.91
CNOT9-202ENST00000295701 CCNL2Q96S94 520 aaPredicted RBP9.36□□□□□ -0.91
CNOT9-202ENST00000295701 KRTAP4-6Q9BYQ5 205 aa9.36□□□□□ -0.91
CNOT9-202ENST00000295701 PRM3Q9NNZ6 103 aa9.36□□□□□ -0.91
CNOT9-202ENST00000295701 PCDH12Q9NPG4 1184 aa9.36□□□□□ -0.91
CNOT9-202ENST00000295701 NLRC4Q9NPP4 1024 aa9.36□□□□□ -0.91
CNOT9-202ENST00000295701 MRPL40Q9NQ50 206 aaKnown RBP9.36□□□□□ -0.91
CNOT9-202ENST00000295701 DKK3Q9UBP4 350 aa9.36□□□□□ -0.91
CNOT9-202ENST00000295701 ZFC3H1O60293 1989 aaKnown RBP9.35□□□□□ -0.91
CNOT9-202ENST00000295701 CXorf51AA0A1B0GTR3 108 aa9.35□□□□□ -0.91
CNOT9-202ENST00000295701 TMEM202A6NGA9 273 aa9.35□□□□□ -0.91
CNOT9-202ENST00000295701 CAPN8A6NHC0 703 aa9.35□□□□□ -0.91
CNOT9-202ENST00000295701 RASA4BC9J798 803 aa9.35□□□□□ -0.91
CNOT9-202ENST00000295701 D6RAR5 112 aa9.35□□□□□ -0.91
CNOT9-202ENST00000295701 J3KR12 359 aa9.35□□□□□ -0.91
CNOT9-202ENST00000295701 PLD2O14939 933 aa9.35□□□□□ -0.91
CNOT9-202ENST00000295701 CCP110O43303 1012 aa9.35□□□□□ -0.91
CNOT9-202ENST00000295701 RASA4O43374 803 aa9.35□□□□□ -0.91
CNOT9-202ENST00000295701 CREB3O43889 395 aa9.35□□□□□ -0.91
CNOT9-202ENST00000295701 ITGA2BP08514 1039 aa9.35□□□□□ -0.91
CNOT9-202ENST00000295701 KRT3P12035 628 aa9.35□□□□□ -0.91
CNOT9-202ENST00000295701 UNGP13051 313 aaPredicted RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms