RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 CBX6O95503 412 aa9.19□□□□□ -0.94
PDPN-201ENST00000294489 RHOP08100 348 aa9.19□□□□□ -0.94
PDPN-201ENST00000294489 MYL4P12829 197 aa9.19□□□□□ -0.94
PDPN-201ENST00000294489 GMPRP36959 345 aa9.19□□□□□ -0.94
PDPN-201ENST00000294489 NUMBP49757 651 aa9.19□□□□□ -0.94
PDPN-201ENST00000294489 KPNA2P52292 529 aaKnown RBP9.19□□□□□ -0.94
PDPN-201ENST00000294489 ABCE1P61221 599 aaKnown RBP9.19□□□□□ -0.94
PDPN-201ENST00000294489 ILF2Q12905 390 aaKnown RBP9.19□□□□□ -0.94
PDPN-201ENST00000294489 USP4Q13107 963 aa9.19□□□□□ -0.94
PDPN-201ENST00000294489 SLC5A9Q2M3M2 681 aa9.19□□□□□ -0.94
PDPN-201ENST00000294489 FAM109BQ6ICB4 259 aaPredicted RBP9.19□□□□□ -0.94
PDPN-201ENST00000294489 RIN3Q8TB24 985 aa9.19□□□□□ -0.94
PDPN-201ENST00000294489 WFDC5Q8TCV5 224 aa9.19□□□□□ -0.94
PDPN-201ENST00000294489 TCEAL4Q96EI5 215 aa9.19□□□□□ -0.94
PDPN-201ENST00000294489 SCYL1Q96KG9 808 aa9.19□□□□□ -0.94
PDPN-201ENST00000294489 RILPQ96NA2 401 aa9.19□□□□□ -0.94
PDPN-201ENST00000294489 LMAN2LQ9H0V9 348 aa9.19□□□□□ -0.94
PDPN-201ENST00000294489 MUC3BQ9H195 1237 aa9.19□□□□□ -0.94
PDPN-201ENST00000294489 STN1Q9H668 368 aaKnown RBP9.19□□□□□ -0.94
PDPN-201ENST00000294489 FBXO6Q9NRD1 293 aaPredicted RBP9.19□□□□□ -0.94
PDPN-201ENST00000294489 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.19□□□□□ -0.94
PDPN-201ENST00000294489 RUVBL2Q9Y230 463 aaKnown RBP9.19□□□□□ -0.94
PDPN-201ENST00000294489 ARIH1Q9Y4X5 557 aaPredicted RBP9.19□□□□□ -0.94
PDPN-201ENST00000294489 A0A087X1B8 175 aa9.19□□□□□ -0.94
PDPN-201ENST00000294489 CBX4O00257 560 aa9.19□□□□□ -0.94
PDPN-201ENST00000294489 ITM2AO43736 263 aa9.19□□□□□ -0.94
PDPN-201ENST00000294489 MGRN1O60291 552 aa9.19□□□□□ -0.94
PDPN-201ENST00000294489 LYPLA1O75608 230 aaPredicted RBP9.19□□□□□ -0.94
PDPN-201ENST00000294489 RFPL2O75678 378 aa9.19□□□□□ -0.94
PDPN-201ENST00000294489 GJB3O75712 270 aa9.19□□□□□ -0.94
PDPN-201ENST00000294489 PENKP01210 267 aaPredicted RBP9.19□□□□□ -0.94
PDPN-201ENST00000294489 SLC35E2BP0CK96 405 aa9.19□□□□□ -0.94
PDPN-201ENST00000294489 MZF1P28698 734 aaPredicted RBP9.19□□□□□ -0.94
PDPN-201ENST00000294489 AVPR1AP37288 418 aa9.19□□□□□ -0.94
PDPN-201ENST00000294489 RGRP47804 291 aa9.19□□□□□ -0.94
PDPN-201ENST00000294489 CSNK1DP48730 415 aa9.19□□□□□ -0.94
PDPN-201ENST00000294489 PRKAA2P54646 552 aa9.19□□□□□ -0.94
PDPN-201ENST00000294489 ZNF77Q15935 545 aa9.19□□□□□ -0.94
PDPN-201ENST00000294489 TSNAXIP1Q2TAA8 658 aa9.19□□□□□ -0.94
PDPN-201ENST00000294489 PTAR1Q7Z6K3 402 aaPredicted RBP9.19□□□□□ -0.94
PDPN-201ENST00000294489 OR13J1Q8NGT2 312 aa9.19□□□□□ -0.94
PDPN-201ENST00000294489 BRSK1Q8TDC3 778 aa9.19□□□□□ -0.94
PDPN-201ENST00000294489 BLOC1S5Q8TDH9 187 aa9.19□□□□□ -0.94
PDPN-201ENST00000294489 USP13Q92995 863 aaPredicted RBP9.19□□□□□ -0.94
PDPN-201ENST00000294489 MFSD1Q9H3U5 465 aa9.19□□□□□ -0.94
PDPN-201ENST00000294489 CPSF2Q9P2I0 782 aaKnown RBP9.19□□□□□ -0.94
PDPN-201ENST00000294489 DPP7Q9UHL4 492 aa9.19□□□□□ -0.94
PDPN-201ENST00000294489 TRIM33Q9UPN9 1127 aa9.19□□□□□ -0.94
PDPN-201ENST00000294489 YBX2Q9Y2T7 364 aaKnown RBP9.19□□□□□ -0.94
PDPN-201ENST00000294489 SH3BP1Q9Y3L3 701 aa9.19□□□□□ -0.94
PDPN-201ENST00000294489 ACTL7AQ9Y615 435 aa9.19□□□□□ -0.94
PDPN-201ENST00000294489 GRXCR1A8MXD5 290 aa9.18□□□□□ -0.94
PDPN-201ENST00000294489 TMEM114B3SHH9 223 aa9.18□□□□□ -0.94
PDPN-201ENST00000294489 G3V2L1 256 aa9.18□□□□□ -0.94
PDPN-201ENST00000294489 FCHO1O14526 889 aa9.18□□□□□ -0.94
PDPN-201ENST00000294489 INSIG1O15503 277 aa9.18□□□□□ -0.94
PDPN-201ENST00000294489 LDB2O43679 373 aa9.18□□□□□ -0.94
PDPN-201ENST00000294489 XYLBO75191 536 aa9.18□□□□□ -0.94
PDPN-201ENST00000294489 HSPA4LO95757 839 aa9.18□□□□□ -0.94
PDPN-201ENST00000294489 NDST3O95803 873 aa9.18□□□□□ -0.94
PDPN-201ENST00000294489 CKMP06732 381 aa9.18□□□□□ -0.94
PDPN-201ENST00000294489 CA3P07451 260 aa9.18□□□□□ -0.94
PDPN-201ENST00000294489 T-ENOLP0DO92 83 aa9.18□□□□□ -0.94
PDPN-201ENST00000294489 LEPRP48357 1165 aaKnown RBP9.18□□□□□ -0.94
PDPN-201ENST00000294489 SCNN1BP51168 640 aa9.18□□□□□ -0.94
PDPN-201ENST00000294489 CLCN5P51795 746 aa9.18□□□□□ -0.94
PDPN-201ENST00000294489 SHHQ15465 462 aa9.18□□□□□ -0.94
PDPN-201ENST00000294489 TEAD2Q15562 447 aa9.18□□□□□ -0.94
PDPN-201ENST00000294489 SNCBQ16143 134 aa9.18□□□□□ -0.94
PDPN-201ENST00000294489 CTC1Q2NKJ3 1217 aa9.18□□□□□ -0.94
PDPN-201ENST00000294489 GPR158Q5T848 1215 aa9.18□□□□□ -0.94
PDPN-201ENST00000294489 TDRD5Q8NAT2 981 aaKnown RBP9.18□□□□□ -0.94
PDPN-201ENST00000294489 HDAC10Q969S8 669 aa9.18□□□□□ -0.94
PDPN-201ENST00000294489 TSPAN17Q96FV3 270 aa9.18□□□□□ -0.94
PDPN-201ENST00000294489 TMEM237Q96Q45 408 aa9.18□□□□□ -0.94
PDPN-201ENST00000294489 NOD2Q9HC29 1040 aa9.18□□□□□ -0.94
PDPN-201ENST00000294489 LNPEPQ9UIQ6 1025 aa9.18□□□□□ -0.94
PDPN-201ENST00000294489 STK38LQ9Y2H1 464 aa9.18□□□□□ -0.94
PDPN-201ENST00000294489 BPTFQ12830 3046 aa9.18□□□□□ -0.94
PDPN-201ENST00000294489 KIAA1549LQ6ZVL6 1849 aa9.18□□□□□ -0.94
PDPN-201ENST00000294489 H0Y626 953 aa9.18□□□□□ -0.94
PDPN-201ENST00000294489 CLGNO14967 610 aa9.18□□□□□ -0.94
PDPN-201ENST00000294489 PRLP01236 227 aa9.18□□□□□ -0.94
PDPN-201ENST00000294489 GJA1P17302 382 aa9.18□□□□□ -0.94
PDPN-201ENST00000294489 PTPN4P29074 926 aa9.18□□□□□ -0.94
PDPN-201ENST00000294489 CSKP41240 450 aa9.18□□□□□ -0.94
PDPN-201ENST00000294489 ASPHQ12797 758 aa9.18□□□□□ -0.94
PDPN-201ENST00000294489 GPM6BQ13491 265 aa9.18□□□□□ -0.94
PDPN-201ENST00000294489 GALNT3Q14435 633 aa9.18□□□□□ -0.94
PDPN-201ENST00000294489 KRT72Q14CN4 511 aa9.18□□□□□ -0.94
PDPN-201ENST00000294489 ARHGAP15Q53QZ3 475 aa9.18□□□□□ -0.94
PDPN-201ENST00000294489 NCEH1Q6PIU2 408 aa9.18□□□□□ -0.94
PDPN-201ENST00000294489 KIAA0907Q7Z7F0 614 aaPredicted RBP9.18□□□□□ -0.94
PDPN-201ENST00000294489 CILP2Q8IUL8 1156 aa9.18□□□□□ -0.94
PDPN-201ENST00000294489 CARNMT1Q8N4J0 409 aa9.18□□□□□ -0.94
PDPN-201ENST00000294489 TTC8Q8TAM2 541 aa9.18□□□□□ -0.94
PDPN-201ENST00000294489 SH3RF2Q8TEC5 729 aa9.18□□□□□ -0.94
PDPN-201ENST00000294489 KCTD4Q8WVF5 259 aa9.18□□□□□ -0.94
PDPN-201ENST00000294489 NSL1Q96IY1 281 aa9.18□□□□□ -0.94
PDPN-201ENST00000294489 C1QTNF1Q9BXJ1 281 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms