RNA–Protein interactions for RNA: ENST00000290460.7

SCUBE1-201, Transcript of signal peptide, CUB domain and EGF like domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene SCUBE1, Length 2,258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1-201ENST00000290460 C6orf203Q9P0P8 240 aaPredicted RBP20.03■□□□□ 0.8
SCUBE1-201ENST00000290460 ATP6AP2A0A1C7CYW4 349 aa20.02■□□□□ 0.8
SCUBE1-201ENST00000290460 CCDC189A1A4V9 331 aa20.02■□□□□ 0.8
SCUBE1-201ENST00000290460 LDB2O43679 373 aa20.02■□□□□ 0.8
SCUBE1-201ENST00000290460 ATP6AP2O75787 350 aa20.02■□□□□ 0.8
SCUBE1-201ENST00000290460 ACVRL1P37023 503 aa20.02■□□□□ 0.8
SCUBE1-201ENST00000290460 DSC1Q08554 894 aa20.02■□□□□ 0.8
SCUBE1-201ENST00000290460 PTK2BQ14289 1009 aa20.02■□□□□ 0.8
SCUBE1-201ENST00000290460 ACAP2Q15057 778 aa20.02■□□□□ 0.8
SCUBE1-201ENST00000290460 VARS2Q5ST30 1063 aaKnown RBP20.02■□□□□ 0.8
SCUBE1-201ENST00000290460 ISLR2Q6UXK2 745 aa20.02■□□□□ 0.8
SCUBE1-201ENST00000290460 OR52K2Q8NGK3 314 aa20.02■□□□□ 0.8
SCUBE1-201ENST00000290460 ZNF483Q8TF39 744 aaPredicted RBP20.02■□□□□ 0.8
SCUBE1-201ENST00000290460 TSPAN17Q96FV3 270 aa20.02■□□□□ 0.8
SCUBE1-201ENST00000290460 GSTO2Q9H4Y5 243 aa20.02■□□□□ 0.8
SCUBE1-201ENST00000290460 MEAF6Q9HAF1 191 aa20.02■□□□□ 0.8
SCUBE1-201ENST00000290460 ADA2Q9NZK5 511 aa20.02■□□□□ 0.8
SCUBE1-201ENST00000290460 FNIP2Q9P278 1114 aa20.02■□□□□ 0.8
SCUBE1-201ENST00000290460 SLC27A5Q9Y2P5 690 aa20.02■□□□□ 0.8
SCUBE1-201ENST00000290460 ARL5AQ9Y689 179 aa20.02■□□□□ 0.8
SCUBE1-201ENST00000290460 EME2A4GXA9 379 aaPredicted RBP20.02■□□□□ 0.8
SCUBE1-201ENST00000290460 MUSKO15146 869 aa20.02■□□□□ 0.8
SCUBE1-201ENST00000290460 SLC7A4O43246 635 aa20.02■□□□□ 0.8
SCUBE1-201ENST00000290460 PEX1O43933 1283 aa20.02■□□□□ 0.8
SCUBE1-201ENST00000290460 PAPSS2O95340 614 aaPredicted RBP20.02■□□□□ 0.8
SCUBE1-201ENST00000290460 RPLP2P05387 115 aaKnown RBP20.02■□□□□ 0.8
SCUBE1-201ENST00000290460 RBP1P09455 135 aa20.02■□□□□ 0.8
SCUBE1-201ENST00000290460 PAX3P23760 479 aa20.02■□□□□ 0.8
SCUBE1-201ENST00000290460 YWHAQP27348 245 aa20.02■□□□□ 0.8
SCUBE1-201ENST00000290460 POLD3Q15054 466 aaPredicted RBP20.02■□□□□ 0.8
SCUBE1-201ENST00000290460 SLC14A2Q15849 920 aa20.02■□□□□ 0.8
SCUBE1-201ENST00000290460 CHSY3Q70JA7 882 aa20.02■□□□□ 0.8
SCUBE1-201ENST00000290460 COLGALT2Q8IYK4 626 aa20.02■□□□□ 0.8
SCUBE1-201ENST00000290460 BLOC1S5Q8TDH9 187 aa20.02■□□□□ 0.8
SCUBE1-201ENST00000290460 C8orf48Q96LL4 319 aa20.02■□□□□ 0.8
SCUBE1-201ENST00000290460 RPRD1AQ96P16 312 aaPredicted RBP20.02■□□□□ 0.8
SCUBE1-201ENST00000290460 TRAPPC9Q96Q05 1148 aa20.02■□□□□ 0.8
SCUBE1-201ENST00000290460 SEMA3CQ99985 751 aa20.02■□□□□ 0.8
SCUBE1-201ENST00000290460 MFSD1Q9H3U5 465 aa20.02■□□□□ 0.8
SCUBE1-201ENST00000290460 EML4Q9HC35 981 aaKnown RBP20.02■□□□□ 0.8
SCUBE1-201ENST00000290460 RIMS3Q9UJD0 308 aa20.02■□□□□ 0.8
SCUBE1-201ENST00000290460 IGLV3-10A0A075B6K4 115 aa20.01■□□□□ 0.79
SCUBE1-201ENST00000290460 SUPT7LO94864 414 aa20.01■□□□□ 0.79
SCUBE1-201ENST00000290460 HSPA1AP0DMV8 641 aaKnown RBP20.01■□□□□ 0.79
SCUBE1-201ENST00000290460 HSPA1BP0DMV9 641 aaKnown RBP20.01■□□□□ 0.79
SCUBE1-201ENST00000290460 SATB1Q01826 763 aa20.01■□□□□ 0.79
SCUBE1-201ENST00000290460 GALNT3Q14435 633 aa20.01■□□□□ 0.79
SCUBE1-201ENST00000290460 RFTN1Q14699 578 aaPredicted RBP20.01■□□□□ 0.79
SCUBE1-201ENST00000290460 PDK3Q15120 406 aa20.01■□□□□ 0.79
SCUBE1-201ENST00000290460 C10orf120Q5SQS8 335 aa20.01■□□□□ 0.79
SCUBE1-201ENST00000290460 ISCA2Q86U28 154 aa20.01■□□□□ 0.79
SCUBE1-201ENST00000290460 TEX26Q8N6G2 289 aa20.01■□□□□ 0.79
SCUBE1-201ENST00000290460 LINC01599Q8WXQ3 324 aa20.01■□□□□ 0.79
SCUBE1-201ENST00000290460 FBXO32Q969P5 355 aa20.01■□□□□ 0.79
SCUBE1-201ENST00000290460 PTERQ96BW5 349 aa20.01■□□□□ 0.79
SCUBE1-201ENST00000290460 CCDC126Q96EE4 140 aa20.01■□□□□ 0.79
SCUBE1-201ENST00000290460 BTN2A3PQ96KV6 586 aa20.01■□□□□ 0.79
SCUBE1-201ENST00000290460 LRGUKQ96M69 825 aa20.01■□□□□ 0.79
SCUBE1-201ENST00000290460 MRPL1Q9BYD6 325 aaKnown RBP20.01■□□□□ 0.79
SCUBE1-201ENST00000290460 RGS18Q9NS28 235 aa20.01■□□□□ 0.79
SCUBE1-201ENST00000290460 PCDHGA7Q9Y5G6 932 aa20.01■□□□□ 0.79
SCUBE1-201ENST00000290460 ACOT8O14734 319 aa20.01■□□□□ 0.79
SCUBE1-201ENST00000290460 UBDO15205 165 aa20.01■□□□□ 0.79
SCUBE1-201ENST00000290460 RAMP2O60895 175 aa20.01■□□□□ 0.79
SCUBE1-201ENST00000290460 BCAS2O75934 225 aaPredicted RBP20.01■□□□□ 0.79
SCUBE1-201ENST00000290460 FESP07332 822 aa20.01■□□□□ 0.79
SCUBE1-201ENST00000290460 PRKCZQ05513 592 aa20.01■□□□□ 0.79
SCUBE1-201ENST00000290460 PDAP1Q13442 181 aaKnown RBP20.01■□□□□ 0.79
SCUBE1-201ENST00000290460 ADGRE1Q14246 886 aa20.01■□□□□ 0.79
SCUBE1-201ENST00000290460 FASTKQ14296 549 aaKnown RBP20.01■□□□□ 0.79
SCUBE1-201ENST00000290460 TLR1Q15399 786 aa20.01■□□□□ 0.79
SCUBE1-201ENST00000290460 NFE2Q16621 373 aaPredicted RBP20.01■□□□□ 0.79
SCUBE1-201ENST00000290460 AGKQ53H12 422 aa20.01■□□□□ 0.79
SCUBE1-201ENST00000290460 CCSAPQ6IQ19 270 aaPredicted RBP20.01■□□□□ 0.79
SCUBE1-201ENST00000290460 CYHR1Q6ZMK1 362 aa20.01■□□□□ 0.79
SCUBE1-201ENST00000290460 RYBPQ8N488 228 aaPredicted RBP20.01■□□□□ 0.79
SCUBE1-201ENST00000290460 ATP6V0D2Q8N8Y2 350 aa20.01■□□□□ 0.79
SCUBE1-201ENST00000290460 OR9I1Q8NGQ6 314 aa20.01■□□□□ 0.79
SCUBE1-201ENST00000290460 FUBP3Q96I24 572 aaKnown RBP eCLIP20.01■□□□□ 0.79
SCUBE1-201ENST00000290460 DNAJC1Q96KC8 554 aaKnown RBP20.01■□□□□ 0.79
SCUBE1-201ENST00000290460 ZIC5Q96T25 663 aa20.01■□□□□ 0.79
SCUBE1-201ENST00000290460 MARCH2Q9P0N8 246 aa20.01■□□□□ 0.79
SCUBE1-201ENST00000290460 PCDHB5Q9Y5E4 795 aa20.01■□□□□ 0.79
SCUBE1-201ENST00000290460 ACTL7AQ9Y615 435 aa20.01■□□□□ 0.79
SCUBE1-201ENST00000290460 E7ENX8 843 aa20■□□□□ 0.79
SCUBE1-201ENST00000290460 FBP2O00757 339 aa20■□□□□ 0.79
SCUBE1-201ENST00000290460 WISP3O95389 354 aaPredicted RBP20■□□□□ 0.79
SCUBE1-201ENST00000290460 OR1E1P30953 314 aa20■□□□□ 0.79
SCUBE1-201ENST00000290460 CDH13P55290 713 aa20■□□□□ 0.79
SCUBE1-201ENST00000290460 PSME3P61289 254 aa20■□□□□ 0.79
SCUBE1-201ENST00000290460 SEMA3AQ14563 771 aa20■□□□□ 0.79
SCUBE1-201ENST00000290460 MBTPS1Q14703 1052 aa20■□□□□ 0.79
SCUBE1-201ENST00000290460 RASIP1Q5U651 963 aa20■□□□□ 0.79
SCUBE1-201ENST00000290460 RGMBQ6NW40 437 aa20■□□□□ 0.79
SCUBE1-201ENST00000290460 ZNF549Q6P9A3 640 aa20■□□□□ 0.79
SCUBE1-201ENST00000290460 SPATA24Q86W54 205 aa20■□□□□ 0.79
SCUBE1-201ENST00000290460 PKP2Q99959 881 aa20■□□□□ 0.79
SCUBE1-201ENST00000290460 PCDHAC1Q9H158 963 aa20■□□□□ 0.79
SCUBE1-201ENST00000290460 FBRSL1Q9HCM7 1045 aaKnown RBP20■□□□□ 0.79
SCUBE1-201ENST00000290460 PAPOLBQ9NRJ5 636 aaKnown RBP20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms