RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 TMC5Q6UXY8 1006 aa18.59■□□□□ 0.57
PCDH1-201ENST00000287008 C17orf64Q86WR6 236 aa18.59■□□□□ 0.57
PCDH1-201ENST00000287008 PLD5Q8N7P1 536 aa18.59■□□□□ 0.57
PCDH1-201ENST00000287008 AP2M1Q96CW1 435 aa18.59■□□□□ 0.57
PCDH1-201ENST00000287008 DPEP3Q9H4B8 488 aa18.59■□□□□ 0.57
PCDH1-201ENST00000287008 NDRG2Q9UN36 371 aaKnown RBP18.59■□□□□ 0.57
PCDH1-201ENST00000287008 DUSP12Q9UNI6 340 aa18.59■□□□□ 0.57
PCDH1-201ENST00000287008 TCRBV9S1A1TA0A576 114 aa18.59■□□□□ 0.57
PCDH1-201ENST00000287008 LRRC72A6NJI9 287 aa18.59■□□□□ 0.57
PCDH1-201ENST00000287008 POP4O95707 220 aaKnown RBP18.59■□□□□ 0.57
PCDH1-201ENST00000287008 LRPAP1P30533 357 aa18.59■□□□□ 0.57
PCDH1-201ENST00000287008 CRATP43155 626 aa18.59■□□□□ 0.57
PCDH1-201ENST00000287008 CAP1Q01518 475 aa18.59■□□□□ 0.57
PCDH1-201ENST00000287008 AUHQ13825 339 aaKnown RBP18.59■□□□□ 0.57
PCDH1-201ENST00000287008 KPNB1Q14974 876 aaKnown RBP18.59■□□□□ 0.57
PCDH1-201ENST00000287008 TIGD5Q53EQ6 642 aa18.59■□□□□ 0.57
PCDH1-201ENST00000287008 TPGS2Q68CL5 300 aa18.59■□□□□ 0.57
PCDH1-201ENST00000287008 TYW3Q6IPR3 259 aaKnown RBP18.59■□□□□ 0.57
PCDH1-201ENST00000287008 EPS8L2Q9H6S3 715 aa18.59■□□□□ 0.57
PCDH1-201ENST00000287008 ABHD14A-ACY1A0A1B0GW23 586 aa18.59■□□□□ 0.57
PCDH1-201ENST00000287008 H3BM21 787 aa18.59■□□□□ 0.57
PCDH1-201ENST00000287008 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.59■□□□□ 0.57
PCDH1-201ENST00000287008 GPM6BQ13491 265 aa18.59■□□□□ 0.57
PCDH1-201ENST00000287008 CYP2R1Q6VVX0 501 aa18.59■□□□□ 0.57
PCDH1-201ENST00000287008 GATAD2AQ86YP4 633 aa18.59■□□□□ 0.57
PCDH1-201ENST00000287008 CD101Q93033 1021 aa18.59■□□□□ 0.57
PCDH1-201ENST00000287008 FAM83DQ9H4H8 585 aa18.59■□□□□ 0.57
PCDH1-201ENST00000287008 PCDHB1Q9Y5F3 818 aa18.59■□□□□ 0.57
PCDH1-201ENST00000287008 BANF1O75531 89 aa18.58■□□□□ 0.57
PCDH1-201ENST00000287008 KLHL23Q8NBE8 558 aa18.58■□□□□ 0.57
PCDH1-201ENST00000287008 A0A0U1RQJ8 604 aa18.58■□□□□ 0.57
PCDH1-201ENST00000287008 HDAC3O15379 428 aa18.58■□□□□ 0.57
PCDH1-201ENST00000287008 KCNH1O95259 989 aa18.58■□□□□ 0.57
PCDH1-201ENST00000287008 AP1S1P61966 158 aa18.58■□□□□ 0.57
PCDH1-201ENST00000287008 SLC20A2Q08357 652 aa18.58■□□□□ 0.57
PCDH1-201ENST00000287008 PRKG2Q13237 762 aa18.58■□□□□ 0.57
PCDH1-201ENST00000287008 MON1BQ7L1V2 547 aa18.58■□□□□ 0.57
PCDH1-201ENST00000287008 SNX15Q9NRS6 342 aa18.58■□□□□ 0.57
PCDH1-201ENST00000287008 IL1RAPL1Q9NZN1 696 aa18.58■□□□□ 0.57
PCDH1-201ENST00000287008 SLC38A8A6NNN8 435 aa18.58■□□□□ 0.56
PCDH1-201ENST00000287008 RPP40O75818 363 aaKnown RBP18.58■□□□□ 0.56
PCDH1-201ENST00000287008 VIPP01282 170 aa18.58■□□□□ 0.56
PCDH1-201ENST00000287008 CCNCP24863 283 aa18.58■□□□□ 0.56
PCDH1-201ENST00000287008 POLD2P49005 469 aa18.58■□□□□ 0.56
PCDH1-201ENST00000287008 DGKGP49619 791 aa18.58■□□□□ 0.56
PCDH1-201ENST00000287008 RPL38P63173 70 aaKnown RBP18.58■□□□□ 0.56
PCDH1-201ENST00000287008 TCHHL1Q5QJ38 904 aaPredicted RBP18.58■□□□□ 0.56
PCDH1-201ENST00000287008 PACS1Q6VY07 963 aa18.58■□□□□ 0.56
PCDH1-201ENST00000287008 ARCQ7LC44 396 aa18.58■□□□□ 0.56
PCDH1-201ENST00000287008 BTBD10Q9BSF8 475 aa18.58■□□□□ 0.56
PCDH1-201ENST00000287008 TXNRD2Q9NNW7 524 aa18.58■□□□□ 0.56
PCDH1-201ENST00000287008 KCTD5Q9NXV2 234 aa18.58■□□□□ 0.56
PCDH1-201ENST00000287008 EPORP19235 508 aa18.58■□□□□ 0.56
PCDH1-201ENST00000287008 JAK1P23458 1154 aa18.58■□□□□ 0.56
PCDH1-201ENST00000287008 ENPEPQ07075 957 aa18.58■□□□□ 0.56
PCDH1-201ENST00000287008 ILF3Q12906 894 aaKnown RBP eCLIP18.58■□□□□ 0.56
PCDH1-201ENST00000287008 RHBDF2Q6PJF5 856 aa18.58■□□□□ 0.56
PCDH1-201ENST00000287008 PLD4Q96BZ4 506 aa18.58■□□□□ 0.56
PCDH1-201ENST00000287008 SLC9A7Q96T83 725 aa18.58■□□□□ 0.56
PCDH1-201ENST00000287008 TBC1D23Q9NUY8 699 aa18.58■□□□□ 0.56
PCDH1-201ENST00000287008 NRP1O14786 923 aa18.57■□□□□ 0.56
PCDH1-201ENST00000287008 PIAS1O75925 651 aa18.57■□□□□ 0.56
PCDH1-201ENST00000287008 SNUPNO95149 360 aaKnown RBP18.57■□□□□ 0.56
PCDH1-201ENST00000287008 CCDC159P0C7I6 412 aa18.57■□□□□ 0.56
PCDH1-201ENST00000287008 LMO2P25791 158 aa18.57■□□□□ 0.56
PCDH1-201ENST00000287008 PBX3P40426 434 aa18.57■□□□□ 0.56
PCDH1-201ENST00000287008 BST1Q10588 318 aa18.57■□□□□ 0.56
PCDH1-201ENST00000287008 MRPL28Q13084 256 aaKnown RBP18.57■□□□□ 0.56
PCDH1-201ENST00000287008 ZCWPW2Q504Y3 356 aa18.57■□□□□ 0.56
PCDH1-201ENST00000287008 ARHGAP17Q68EM7 881 aa18.57■□□□□ 0.56
PCDH1-201ENST00000287008 UBE2R2Q712K3 238 aaPredicted RBP18.57■□□□□ 0.56
PCDH1-201ENST00000287008 RDH11Q8TC12 318 aa18.57■□□□□ 0.56
PCDH1-201ENST00000287008 MBOAT7Q96N66 472 aa18.57■□□□□ 0.56
PCDH1-201ENST00000287008 ZC4H2Q9NQZ6 224 aa18.57■□□□□ 0.56
PCDH1-201ENST00000287008 ATG13O75143 517 aa18.57■□□□□ 0.56
PCDH1-201ENST00000287008 PROCP04070 461 aa18.57■□□□□ 0.56
PCDH1-201ENST00000287008 CCL5P13501 91 aa18.57■□□□□ 0.56
PCDH1-201ENST00000287008 HGFP14210 728 aa18.57■□□□□ 0.56
PCDH1-201ENST00000287008 TSPAN8P19075 237 aa18.57■□□□□ 0.56
PCDH1-201ENST00000287008 SPAM1P38567 509 aa18.57■□□□□ 0.56
PCDH1-201ENST00000287008 FNBP1LQ5T0N5 605 aa18.57■□□□□ 0.56
PCDH1-201ENST00000287008 OTOP3Q7RTS5 596 aa18.57■□□□□ 0.56
PCDH1-201ENST00000287008 DSELQ8IZU8 1212 aa18.57■□□□□ 0.56
PCDH1-201ENST00000287008 TFAP2BQ92481 460 aa18.57■□□□□ 0.56
PCDH1-201ENST00000287008 KCTD15Q96SI1 283 aaPredicted RBP18.57■□□□□ 0.56
PCDH1-201ENST00000287008 SORCS3Q9UPU3 1222 aa18.57■□□□□ 0.56
PCDH1-201ENST00000287008 ADGRA3Q8IWK6 1321 aa18.57■□□□□ 0.56
PCDH1-201ENST00000287008 SLC28A1O00337 649 aa18.57■□□□□ 0.56
PCDH1-201ENST00000287008 CLK3P49761 638 aaKnown RBP18.57■□□□□ 0.56
PCDH1-201ENST00000287008 CAPN13Q6MZZ7 669 aaPredicted RBP18.57■□□□□ 0.56
PCDH1-201ENST00000287008 AGMOQ6ZNB7 445 aa18.57■□□□□ 0.56
PCDH1-201ENST00000287008 CTU1Q7Z7A3 348 aaKnown RBP18.57■□□□□ 0.56
PCDH1-201ENST00000287008 GPR180Q86V85 440 aa18.57■□□□□ 0.56
PCDH1-201ENST00000287008 CEP44Q9C0F1 390 aa18.57■□□□□ 0.56
PCDH1-201ENST00000287008 KLHL4Q9C0H6 718 aa18.57■□□□□ 0.56
PCDH1-201ENST00000287008 NMUR1Q9HB89 426 aa18.57■□□□□ 0.56
PCDH1-201ENST00000287008 DMAC2Q9NW81 257 aa18.57■□□□□ 0.56
PCDH1-201ENST00000287008 LRRC14BA6NHZ5 514 aa18.57■□□□□ 0.56
PCDH1-201ENST00000287008 PER2O15055 1255 aa18.57■□□□□ 0.56
PCDH1-201ENST00000287008 ANGPT1Q15389 498 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms