RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 TREX1Q9NSU2 369 aa10.44□□□□□ -0.74
SKA1-201ENST00000285116 CDC14AQ9UNH5 594 aa10.44□□□□□ -0.74
SKA1-201ENST00000285116 NEU3Q9UQ49 428 aa10.44□□□□□ -0.74
SKA1-201ENST00000285116 DOCK3Q8IZD9 2030 aa10.43□□□□□ -0.74
SKA1-201ENST00000285116 K7EPI3 171 aa10.43□□□□□ -0.74
SKA1-201ENST00000285116 BEST1O76090 585 aa10.43□□□□□ -0.74
SKA1-201ENST00000285116 ATE1O95260 518 aa10.43□□□□□ -0.74
SKA1-201ENST00000285116 STMN1P16949 149 aa10.43□□□□□ -0.74
SKA1-201ENST00000285116 CDH3P22223 829 aa10.43□□□□□ -0.74
SKA1-201ENST00000285116 SLC26A3P40879 764 aa10.43□□□□□ -0.74
SKA1-201ENST00000285116 TMED10P49755 219 aaKnown RBP10.43□□□□□ -0.74
SKA1-201ENST00000285116 GTF2A2P52657 109 aa10.43□□□□□ -0.74
SKA1-201ENST00000285116 PSME3P61289 254 aa10.43□□□□□ -0.74
SKA1-201ENST00000285116 KCNC4Q03721 635 aa10.43□□□□□ -0.74
SKA1-201ENST00000285116 EIF4EBP2Q13542 120 aaPredicted RBP10.43□□□□□ -0.74
SKA1-201ENST00000285116 DUSP28Q4G0W2 176 aa10.43□□□□□ -0.74
SKA1-201ENST00000285116 MTX3Q5HYI7 312 aa10.43□□□□□ -0.74
SKA1-201ENST00000285116 DENND5AQ6IQ26 1287 aa10.43□□□□□ -0.74
SKA1-201ENST00000285116 PPP4R4Q6NUP7 873 aa10.43□□□□□ -0.74
SKA1-201ENST00000285116 ANKFN1Q8N957 763 aa10.43□□□□□ -0.74
SKA1-201ENST00000285116 TFAP2CQ92754 450 aa10.43□□□□□ -0.74
SKA1-201ENST00000285116 ATXN7L3BQ96GX2 97 aa10.43□□□□□ -0.74
SKA1-201ENST00000285116 APBA2Q99767 749 aa10.43□□□□□ -0.74
SKA1-201ENST00000285116 TBL1YQ9BQ87 522 aa10.43□□□□□ -0.74
SKA1-201ENST00000285116 TRMOQ9BU70 441 aa10.43□□□□□ -0.74
SKA1-201ENST00000285116 COLEC11Q9BWP8 271 aa10.43□□□□□ -0.74
SKA1-201ENST00000285116 PRKD2Q9BZL6 878 aa10.43□□□□□ -0.74
SKA1-201ENST00000285116 RPF2Q9H7B2 306 aaKnown RBP10.43□□□□□ -0.74
SKA1-201ENST00000285116 EML4Q9HC35 981 aaKnown RBP10.43□□□□□ -0.74
SKA1-201ENST00000285116 DUS2Q9NX74 493 aaKnown RBP10.43□□□□□ -0.74
SKA1-201ENST00000285116 ADA2Q9NZK5 511 aa10.43□□□□□ -0.74
SKA1-201ENST00000285116 FNIP2Q9P278 1114 aa10.43□□□□□ -0.74
SKA1-201ENST00000285116 XPR1Q9UBH6 696 aa10.43□□□□□ -0.74
SKA1-201ENST00000285116 HES2Q9Y543 173 aa10.43□□□□□ -0.74
SKA1-201ENST00000285116 SNX13Q9Y5W8 968 aa10.43□□□□□ -0.74
SKA1-201ENST00000285116 PTPRDP23468 1912 aa10.43□□□□□ -0.74
SKA1-201ENST00000285116 TRIM64A6NGJ6 449 aa10.43□□□□□ -0.74
SKA1-201ENST00000285116 PLOD2O00469 737 aa10.43□□□□□ -0.74
SKA1-201ENST00000285116 NRP1O14786 923 aa10.43□□□□□ -0.74
SKA1-201ENST00000285116 STAMBPO95630 424 aa10.43□□□□□ -0.74
SKA1-201ENST00000285116 UGT1A6P19224 532 aa10.43□□□□□ -0.74
SKA1-201ENST00000285116 UGT1A1P22309 533 aa10.43□□□□□ -0.74
SKA1-201ENST00000285116 UGT1A4P22310 534 aa10.43□□□□□ -0.74
SKA1-201ENST00000285116 ARNTP27540 789 aa10.43□□□□□ -0.74
SKA1-201ENST00000285116 DCKP27707 260 aa10.43□□□□□ -0.74
SKA1-201ENST00000285116 UGT1A3P35503 534 aa10.43□□□□□ -0.74
SKA1-201ENST00000285116 UGT1A5P35504 534 aa10.43□□□□□ -0.74
SKA1-201ENST00000285116 SOX4Q06945 474 aaPredicted RBP10.43□□□□□ -0.74
SKA1-201ENST00000285116 NME3Q13232 169 aa10.43□□□□□ -0.74
SKA1-201ENST00000285116 DGKDQ16760 1214 aa10.43□□□□□ -0.74
SKA1-201ENST00000285116 NANOGP8Q6NSW7 305 aa10.43□□□□□ -0.74
SKA1-201ENST00000285116 TTC33Q6PID6 262 aaPredicted RBP10.43□□□□□ -0.74
SKA1-201ENST00000285116 ZBTB49Q6ZSB9 765 aa10.43□□□□□ -0.74
SKA1-201ENST00000285116 HFE2Q6ZVN8 426 aa10.43□□□□□ -0.74
SKA1-201ENST00000285116 ZNF354CQ86Y25 554 aa10.43□□□□□ -0.74
SKA1-201ENST00000285116 HERC6Q8IVU3 1022 aa10.43□□□□□ -0.74
SKA1-201ENST00000285116 MFSD6LQ8IWD5 586 aa10.43□□□□□ -0.74
SKA1-201ENST00000285116 FAM156AQ8NDB6 213 aa10.43□□□□□ -0.74
SKA1-201ENST00000285116 TRIM62Q9BVG3 475 aa10.43□□□□□ -0.74
SKA1-201ENST00000285116 TRPC7Q9HCX4 862 aa10.43□□□□□ -0.74
SKA1-201ENST00000285116 C8orf4Q9NR00 106 aa10.43□□□□□ -0.74
SKA1-201ENST00000285116 ARMC1Q9NVT9 282 aa10.43□□□□□ -0.74
SKA1-201ENST00000285116 SPATA7Q9P0W8 599 aa10.43□□□□□ -0.74
SKA1-201ENST00000285116 FAM32AQ9Y421 112 aaKnown RBP10.43□□□□□ -0.74
SKA1-201ENST00000285116 TCAF1Q9Y4C2 921 aa10.43□□□□□ -0.74
SKA1-201ENST00000285116 FAM95CA0A1B0GW59 222 aa10.42□□□□□ -0.74
SKA1-201ENST00000285116 CCDC162PA2VCL2 907 aa10.42□□□□□ -0.74
SKA1-201ENST00000285116 HHLA1C9JL84 531 aa10.42□□□□□ -0.74
SKA1-201ENST00000285116 H3BMQ9 156 aa10.42□□□□□ -0.74
SKA1-201ENST00000285116 FOXD2O60548 495 aaPredicted RBP10.42□□□□□ -0.74
SKA1-201ENST00000285116 WISP3O95389 354 aaPredicted RBP10.42□□□□□ -0.74
SKA1-201ENST00000285116 IGLV3-25P01717 112 aa10.42□□□□□ -0.74
SKA1-201ENST00000285116 JUNP05412 331 aaKnown RBP10.42□□□□□ -0.74
SKA1-201ENST00000285116 PAMP19021 973 aa10.42□□□□□ -0.74
SKA1-201ENST00000285116 FGFR3P22607 806 aa10.42□□□□□ -0.74
SKA1-201ENST00000285116 NDUFV1P49821 464 aa10.42□□□□□ -0.74
SKA1-201ENST00000285116 BCL2A1Q16548 175 aa10.42□□□□□ -0.74
SKA1-201ENST00000285116 TECRLQ5HYJ1 363 aa10.42□□□□□ -0.74
SKA1-201ENST00000285116 GLRA4Q5JXX5 417 aa10.42□□□□□ -0.74
SKA1-201ENST00000285116 LRRC49Q8IUZ0 686 aa10.42□□□□□ -0.74
SKA1-201ENST00000285116 ZNF786Q8N393 782 aa10.42□□□□□ -0.74
SKA1-201ENST00000285116 TXNDC5Q8NBS9 432 aaKnown RBP10.42□□□□□ -0.74
SKA1-201ENST00000285116 PPHLN1Q8NEY8 458 aaKnown RBP10.42□□□□□ -0.74
SKA1-201ENST00000285116 HMGCLL1Q8TB92 370 aa10.42□□□□□ -0.74
SKA1-201ENST00000285116 SPPL2BQ8TCT7 592 aa10.42□□□□□ -0.74
SKA1-201ENST00000285116 NDRG1Q92597 394 aaKnown RBP10.42□□□□□ -0.74
SKA1-201ENST00000285116 COG8Q96MW5 612 aa10.42□□□□□ -0.74
SKA1-201ENST00000285116 CIB1Q99828 191 aa10.42□□□□□ -0.74
SKA1-201ENST00000285116 NPLQ9BXD5 320 aaPredicted RBP10.42□□□□□ -0.74
SKA1-201ENST00000285116 ULBP1Q9BZM6 244 aa10.42□□□□□ -0.74
SKA1-201ENST00000285116 ARHGAP39Q9C0H5 1083 aa10.42□□□□□ -0.74
SKA1-201ENST00000285116 CSNK1G1Q9HCP0 422 aa10.42□□□□□ -0.74
SKA1-201ENST00000285116 ENTPD7Q9NQZ7 604 aa10.42□□□□□ -0.74
SKA1-201ENST00000285116 IGSF5Q9NSI5 407 aa10.42□□□□□ -0.74
SKA1-201ENST00000285116 RNF19AQ9NV58 838 aa10.42□□□□□ -0.74
SKA1-201ENST00000285116 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.42□□□□□ -0.74
SKA1-201ENST00000285116 CACNA2D2Q9NY47 1150 aa10.42□□□□□ -0.74
SKA1-201ENST00000285116 TMEM181Q9P2C4 612 aa10.42□□□□□ -0.74
SKA1-201ENST00000285116 SLC45A1Q9Y2W3 748 aa10.42□□□□□ -0.74
SKA1-201ENST00000285116 TRIM17Q9Y577 477 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms