RNA–Protein interactions for RNA: ENST00000269137.11

SS18-201, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SS18, Length 1,836 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-201ENST00000269137 BMPR2Q13873 1038 aa14.17□□□□□ -0.14
SS18-201ENST00000269137 SMAD1Q15797 465 aaKnown RBP14.17□□□□□ -0.14
SS18-201ENST00000269137 ACCSLQ4AC99 568 aa14.17□□□□□ -0.14
SS18-201ENST00000269137 GRAMD4Q6IC98 578 aa14.17□□□□□ -0.14
SS18-201ENST00000269137 SMRP1Q8NCR6 262 aa14.17□□□□□ -0.14
SS18-201ENST00000269137 ACMSDQ8TDX5 336 aa14.17□□□□□ -0.14
SS18-201ENST00000269137 DENND1AQ8TEH3 1009 aa14.17□□□□□ -0.14
SS18-201ENST00000269137 FRS2Q8WU20 508 aa14.17□□□□□ -0.14
SS18-201ENST00000269137 PDCD6IPQ8WUM4 868 aaKnown RBP14.17□□□□□ -0.14
SS18-201ENST00000269137 PTPRN2Q92932 1015 aa14.17□□□□□ -0.14
SS18-201ENST00000269137 SRPK1Q96SB4 655 aaKnown RBP14.17□□□□□ -0.14
SS18-201ENST00000269137 POMKQ9H5K3 350 aa14.17□□□□□ -0.14
SS18-201ENST00000269137 MAGEE1Q9HCI5 957 aa14.17□□□□□ -0.14
SS18-201ENST00000269137 NLE1Q9NVX2 485 aaPredicted RBP14.17□□□□□ -0.14
SS18-201ENST00000269137 ELOVL2Q9NXB9 296 aa14.17□□□□□ -0.14
SS18-201ENST00000269137 NKIRAS1Q9NYS0 192 aa14.17□□□□□ -0.14
SS18-201ENST00000269137 GGT7Q9UJ14 662 aa14.17□□□□□ -0.14
SS18-201ENST00000269137 KCTD3Q9Y597 815 aa14.17□□□□□ -0.14
SS18-201ENST00000269137 SZT2Q5T011 3432 aa14.17□□□□□ -0.14
SS18-201ENST00000269137 C2orf81A6NN90 581 aa14.16□□□□□ -0.14
SS18-201ENST00000269137 SPAG7O75391 227 aa14.16□□□□□ -0.14
SS18-201ENST00000269137 RPP40O75818 363 aaKnown RBP14.16□□□□□ -0.14
SS18-201ENST00000269137 PIGNO95427 931 aa14.16□□□□□ -0.14
SS18-201ENST00000269137 PYGBP11216 843 aa14.16□□□□□ -0.14
SS18-201ENST00000269137 SLC8A1P32418 973 aa14.16□□□□□ -0.14
SS18-201ENST00000269137 HADHAP40939 763 aa14.16□□□□□ -0.14
SS18-201ENST00000269137 CCNFP41002 786 aa14.16□□□□□ -0.14
SS18-201ENST00000269137 SLC6A11P48066 632 aa14.16□□□□□ -0.14
SS18-201ENST00000269137 ARSDP51689 593 aa14.16□□□□□ -0.14
SS18-201ENST00000269137 CCNHP51946 323 aaPredicted RBP14.16□□□□□ -0.14
SS18-201ENST00000269137 EPHB1P54762 984 aa14.16□□□□□ -0.14
SS18-201ENST00000269137 EIF4HQ15056 248 aaKnown RBP14.16□□□□□ -0.14
SS18-201ENST00000269137 PTPRNQ16849 979 aa14.16□□□□□ -0.14
SS18-201ENST00000269137 PARM1Q6UWI2 310 aa14.16□□□□□ -0.14
SS18-201ENST00000269137 DPY19L3Q6ZPD9 716 aa14.16□□□□□ -0.14
SS18-201ENST00000269137 EP400NLQ6ZTU2 488 aa14.16□□□□□ -0.14
SS18-201ENST00000269137 GLT6D1Q7Z4J2 308 aa14.16□□□□□ -0.14
SS18-201ENST00000269137 GALNT7Q86SF2 657 aa14.16□□□□□ -0.14
SS18-201ENST00000269137 RYBPQ8N488 228 aaPredicted RBP14.16□□□□□ -0.14
SS18-201ENST00000269137 KDM1BQ8NB78 822 aa14.16□□□□□ -0.14
SS18-201ENST00000269137 C2CD4AQ8NCU7 369 aaPredicted RBP14.16□□□□□ -0.14
SS18-201ENST00000269137 MDGA1Q8NFP4 955 aa14.16□□□□□ -0.14
SS18-201ENST00000269137 CYB5D2Q8WUJ1 264 aa14.16□□□□□ -0.14
SS18-201ENST00000269137 ATXN2LQ8WWM7 1075 aaKnown RBP14.16□□□□□ -0.14
SS18-201ENST00000269137 HDAC10Q969S8 669 aa14.16□□□□□ -0.14
SS18-201ENST00000269137 ISL2Q96A47 359 aa14.16□□□□□ -0.14
SS18-201ENST00000269137 ECHDC3Q96DC8 303 aa14.16□□□□□ -0.14
SS18-201ENST00000269137 SGSM3Q96HU1 749 aa14.16□□□□□ -0.14
SS18-201ENST00000269137 DNAJC1Q96KC8 554 aaKnown RBP14.16□□□□□ -0.14
SS18-201ENST00000269137 ZNF641Q96N77 438 aaPredicted RBP14.16□□□□□ -0.14
SS18-201ENST00000269137 CIPCQ9C0C6 399 aa14.16□□□□□ -0.14
SS18-201ENST00000269137 RHOJQ9H4E5 214 aa14.16□□□□□ -0.14
SS18-201ENST00000269137 MKS1Q9NXB0 559 aa14.16□□□□□ -0.14
SS18-201ENST00000269137 EPS15L1Q9UBC2 864 aa14.16□□□□□ -0.14
SS18-201ENST00000269137 SLC8A2Q9UPR5 921 aa14.16□□□□□ -0.14
SS18-201ENST00000269137 A0A1W2PQ67 120 aa14.15□□□□□ -0.14
SS18-201ENST00000269137 AURKAO14965 403 aa14.15□□□□□ -0.14
SS18-201ENST00000269137 ZWINTO95229 277 aa14.15□□□□□ -0.14
SS18-201ENST00000269137 LPOP22079 712 aaPredicted RBP14.15□□□□□ -0.14
SS18-201ENST00000269137 GKP32189 559 aa14.15□□□□□ -0.14
SS18-201ENST00000269137 LSP1P33241 339 aa14.15□□□□□ -0.14
SS18-201ENST00000269137 PRAMEP78395 509 aa14.15□□□□□ -0.14
SS18-201ENST00000269137 TTC19Q6DKK2 380 aaPredicted RBP14.15□□□□□ -0.14
SS18-201ENST00000269137 FSTL4Q6MZW2 842 aa14.15□□□□□ -0.14
SS18-201ENST00000269137 Q6ZVU0 165 aa14.15□□□□□ -0.14
SS18-201ENST00000269137 MTSS1LQ765P7 747 aa14.15□□□□□ -0.14
SS18-201ENST00000269137 ZC3HC1Q86WB0 502 aaKnown RBP14.15□□□□□ -0.14
SS18-201ENST00000269137 PHTF2Q8N3S3 785 aa14.15□□□□□ -0.14
SS18-201ENST00000269137 TTC30BQ8N4P2 665 aa14.15□□□□□ -0.14
SS18-201ENST00000269137 ST13P5Q8NFI4 369 aaPredicted RBP14.15□□□□□ -0.14
SS18-201ENST00000269137 OR2A12Q8NGT7 310 aa14.15□□□□□ -0.14
SS18-201ENST00000269137 GPR150Q8NGU9 434 aa14.15□□□□□ -0.14
SS18-201ENST00000269137 SORCS1Q8WY21 1168 aa14.15□□□□□ -0.14
SS18-201ENST00000269137 SUSD6Q92537 303 aa14.15□□□□□ -0.14
SS18-201ENST00000269137 FGF14Q92915 247 aa14.15□□□□□ -0.14
SS18-201ENST00000269137 APOPT1Q96IL0 206 aa14.15□□□□□ -0.14
SS18-201ENST00000269137 TBATAQ96M53 351 aa14.15□□□□□ -0.14
SS18-201ENST00000269137 KLF6Q99612 283 aaPredicted RBP14.15□□□□□ -0.14
SS18-201ENST00000269137 C19orf43Q9BQ61 176 aa14.15□□□□□ -0.14
SS18-201ENST00000269137 KXD1Q9BQD3 176 aa14.15□□□□□ -0.14
SS18-201ENST00000269137 SUV39H2Q9H5I1 410 aa14.15□□□□□ -0.14
SS18-201ENST00000269137 CCDC134Q9H6E4 229 aa14.15□□□□□ -0.14
SS18-201ENST00000269137 FBXO5Q9UKT4 447 aa14.15□□□□□ -0.14
SS18-201ENST00000269137 A0A0J9YYE9 177 aa14.15□□□□□ -0.14
SS18-201ENST00000269137 ERICH4A6NGS2 130 aa14.15□□□□□ -0.14
SS18-201ENST00000269137 GOLGA8RI6L899 631 aa14.15□□□□□ -0.14
SS18-201ENST00000269137 TM9SF1O15321 606 aa14.15□□□□□ -0.14
SS18-201ENST00000269137 TRBC1P01850 177 aa14.15□□□□□ -0.14
SS18-201ENST00000269137 AHSGP02765 367 aa14.15□□□□□ -0.14
SS18-201ENST00000269137 ALDOAP04075 364 aaKnown RBP14.15□□□□□ -0.14
SS18-201ENST00000269137 GABRB3P28472 473 aa14.15□□□□□ -0.14
SS18-201ENST00000269137 GJA4P35212 333 aa14.15□□□□□ -0.14
SS18-201ENST00000269137 RPA3P35244 121 aaPredicted RBP14.15□□□□□ -0.14
SS18-201ENST00000269137 EIF2DP41214 584 aaKnown RBP14.15□□□□□ -0.14
SS18-201ENST00000269137 ABL2P42684 1182 aa14.15□□□□□ -0.14
SS18-201ENST00000269137 SLC1A2P43004 574 aa14.15□□□□□ -0.14
SS18-201ENST00000269137 MAGEA12P43365 314 aa14.15□□□□□ -0.14
SS18-201ENST00000269137 RECQLP46063 649 aaPredicted RBP14.15□□□□□ -0.14
SS18-201ENST00000269137 POLD2P49005 469 aa14.15□□□□□ -0.14
SS18-201ENST00000269137 PPARDQ03181 441 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms