RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 A0A1W2PQ45 241 aaPredicted RBP14.54□□□□□ -0.08
SFSWAP-201ENST00000261674 A0A1W2PQY0 241 aa14.54□□□□□ -0.08
SFSWAP-201ENST00000261674 PLOD2O00469 737 aa14.54□□□□□ -0.08
SFSWAP-201ENST00000261674 PPP6CO00743 305 aa14.54□□□□□ -0.08
SFSWAP-201ENST00000261674 CLIC3O95833 236 aa14.54□□□□□ -0.08
SFSWAP-201ENST00000261674 WARSP23381 471 aaKnown RBP14.54□□□□□ -0.08
SFSWAP-201ENST00000261674 RPL34P49207 117 aaKnown RBP14.54□□□□□ -0.08
SFSWAP-201ENST00000261674 CAPRIN1Q14444 709 aaKnown RBP14.54□□□□□ -0.08
SFSWAP-201ENST00000261674 KLC3Q6P597 504 aa14.54□□□□□ -0.08
SFSWAP-201ENST00000261674 AHI1Q8N157 1196 aa14.54□□□□□ -0.08
SFSWAP-201ENST00000261674 ZNF786Q8N393 782 aa14.54□□□□□ -0.08
SFSWAP-201ENST00000261674 AFAP1L2Q8N4X5 818 aa14.54□□□□□ -0.08
SFSWAP-201ENST00000261674 FAM47BQ8NA70 645 aa14.54□□□□□ -0.08
SFSWAP-201ENST00000261674 LRCH3Q96II8 777 aa14.54□□□□□ -0.08
SFSWAP-201ENST00000261674 GPR78Q96P69 363 aa14.54□□□□□ -0.08
SFSWAP-201ENST00000261674 SLC9A7Q96T83 725 aa14.54□□□□□ -0.08
SFSWAP-201ENST00000261674 VAT1Q99536 393 aa14.54□□□□□ -0.08
SFSWAP-201ENST00000261674 NT5MQ9NPB1 228 aa14.54□□□□□ -0.08
SFSWAP-201ENST00000261674 CNGB3Q9NQW8 809 aa14.54□□□□□ -0.08
SFSWAP-201ENST00000261674 CROTQ9UKG9 612 aa14.54□□□□□ -0.08
SFSWAP-201ENST00000261674 FOXD2O60548 495 aaPredicted RBP14.54□□□□□ -0.08
SFSWAP-201ENST00000261674 ANXA9O76027 345 aa14.54□□□□□ -0.08
SFSWAP-201ENST00000261674 B3GAT3O94766 335 aa14.54□□□□□ -0.08
SFSWAP-201ENST00000261674 MT-ND1P03886 318 aa14.54□□□□□ -0.08
SFSWAP-201ENST00000261674 SNRPB2P08579 225 aaKnown RBP14.54□□□□□ -0.08
SFSWAP-201ENST00000261674 CCL5P13501 91 aa14.54□□□□□ -0.08
SFSWAP-201ENST00000261674 PAMP19021 973 aa14.54□□□□□ -0.08
SFSWAP-201ENST00000261674 ARNTP27540 789 aa14.54□□□□□ -0.08
SFSWAP-201ENST00000261674 NR1H2P55055 460 aa14.54□□□□□ -0.08
SFSWAP-201ENST00000261674 STX1BP61266 288 aa14.54□□□□□ -0.08
SFSWAP-201ENST00000261674 SEMA3BQ13214 749 aa14.54□□□□□ -0.08
SFSWAP-201ENST00000261674 IKBKEQ14164 716 aa14.54□□□□□ -0.08
SFSWAP-201ENST00000261674 GPR158Q5T848 1215 aa14.54□□□□□ -0.08
SFSWAP-201ENST00000261674 BTBD8Q5XKL5 378 aa14.54□□□□□ -0.08
SFSWAP-201ENST00000261674 PIM3Q86V86 326 aa14.54□□□□□ -0.08
SFSWAP-201ENST00000261674 CPSF7Q8N684 471 aaKnown RBP14.54□□□□□ -0.08
SFSWAP-201ENST00000261674 TOP6BLQ8N6T0 577 aa14.54□□□□□ -0.08
SFSWAP-201ENST00000261674 SMG8Q8ND04 991 aaKnown RBP14.54□□□□□ -0.08
SFSWAP-201ENST00000261674 DQX1Q8TE96 717 aaKnown RBP14.54□□□□□ -0.08
SFSWAP-201ENST00000261674 ANKRD49Q8WVL7 239 aa14.54□□□□□ -0.08
SFSWAP-201ENST00000261674 NTAN1Q96AB6 310 aa14.54□□□□□ -0.08
SFSWAP-201ENST00000261674 BRD8Q9H0E9 1235 aa14.54□□□□□ -0.08
SFSWAP-201ENST00000261674 SZT2Q5T011 3432 aa14.54□□□□□ -0.08
SFSWAP-201ENST00000261674 A8MT66 165 aa14.54□□□□□ -0.08
SFSWAP-201ENST00000261674 HAS3O00219 553 aa14.54□□□□□ -0.08
SFSWAP-201ENST00000261674 FBP2O00757 339 aa14.54□□□□□ -0.08
SFSWAP-201ENST00000261674 TMCC1O94876 653 aa14.54□□□□□ -0.08
SFSWAP-201ENST00000261674 F9P00740 461 aa14.54□□□□□ -0.08
SFSWAP-201ENST00000261674 POMCP01189 267 aa14.54□□□□□ -0.08
SFSWAP-201ENST00000261674 HLA-DQB2P05538 268 aa14.54□□□□□ -0.08
SFSWAP-201ENST00000261674 PIRTP0C851 137 aa14.54□□□□□ -0.08
SFSWAP-201ENST00000261674 ZNF26P17031 533 aaPredicted RBP14.54□□□□□ -0.08
SFSWAP-201ENST00000261674 SLC5A2P31639 672 aa14.54□□□□□ -0.08
SFSWAP-201ENST00000261674 HABP4Q5JVS0 413 aaKnown RBP14.54□□□□□ -0.08
SFSWAP-201ENST00000261674 AGAP9Q5VTM2 703 aa14.54□□□□□ -0.08
SFSWAP-201ENST00000261674 LPCAT2Q7L5N7 544 aa14.54□□□□□ -0.08
SFSWAP-201ENST00000261674 KCTD13Q8WZ19 329 aa14.54□□□□□ -0.08
SFSWAP-201ENST00000261674 RNF11Q9Y3C5 154 aa14.54□□□□□ -0.08
SFSWAP-201ENST00000261674 TRAF6Q9Y4K3 522 aa14.54□□□□□ -0.08
SFSWAP-201ENST00000261674 LRRC14BA6NHZ5 514 aa14.53□□□□□ -0.08
SFSWAP-201ENST00000261674 TARM1B6A8C7 271 aa14.53□□□□□ -0.08
SFSWAP-201ENST00000261674 TRMUO75648 421 aaKnown RBP14.53□□□□□ -0.08
SFSWAP-201ENST00000261674 SRP72O76094 671 aaKnown RBP14.53□□□□□ -0.08
SFSWAP-201ENST00000261674 IPO13O94829 963 aaKnown RBP14.53□□□□□ -0.08
SFSWAP-201ENST00000261674 SIX3O95343 332 aaPredicted RBP14.53□□□□□ -0.08
SFSWAP-201ENST00000261674 ARL1P40616 181 aaPredicted RBP14.53□□□□□ -0.08
SFSWAP-201ENST00000261674 WNT3AP56704 352 aa14.53□□□□□ -0.08
SFSWAP-201ENST00000261674 PTPRCAPQ14761 206 aa14.53□□□□□ -0.08
SFSWAP-201ENST00000261674 VPS26BQ4G0F5 336 aa14.53□□□□□ -0.08
SFSWAP-201ENST00000261674 UBXN11Q5T124 520 aa14.53□□□□□ -0.08
SFSWAP-201ENST00000261674 SCN4BQ8IWT1 228 aa14.53□□□□□ -0.08
SFSWAP-201ENST00000261674 NUP93Q8N1F7 819 aa14.53□□□□□ -0.08
SFSWAP-201ENST00000261674 ASB9Q96DX5 294 aa14.53□□□□□ -0.08
SFSWAP-201ENST00000261674 DTNBP1Q96EV8 351 aa14.53□□□□□ -0.08
SFSWAP-201ENST00000261674 EFHD1Q9BUP0 239 aa14.53□□□□□ -0.08
SFSWAP-201ENST00000261674 UPF3AQ9H1J1 476 aaKnown RBP14.53□□□□□ -0.08
SFSWAP-201ENST00000261674 SPAG4Q9NPE6 437 aa14.53□□□□□ -0.08
SFSWAP-201ENST00000261674 PRDM5Q9NQX1 630 aaPredicted RBP14.53□□□□□ -0.08
SFSWAP-201ENST00000261674 DMTF1Q9Y222 760 aa14.53□□□□□ -0.08
SFSWAP-201ENST00000261674 TCAF1Q9Y4C2 921 aa14.53□□□□□ -0.08
SFSWAP-201ENST00000261674 C5orf42Q9H799 3197 aa14.53□□□□□ -0.08
SFSWAP-201ENST00000261674 NRP2O60462 931 aa14.53□□□□□ -0.08
SFSWAP-201ENST00000261674 PAGE1O75459 146 aa14.53□□□□□ -0.08
SFSWAP-201ENST00000261674 CHRM3P20309 590 aa14.53□□□□□ -0.08
SFSWAP-201ENST00000261674 BRCC3P46736 316 aa14.53□□□□□ -0.08
SFSWAP-201ENST00000261674 SCNN1GP51170 649 aa14.53□□□□□ -0.08
SFSWAP-201ENST00000261674 DHFR2Q86XF0 187 aa14.53□□□□□ -0.08
SFSWAP-201ENST00000261674 SPPL2CQ8IUH8 684 aa14.53□□□□□ -0.08
SFSWAP-201ENST00000261674 C3orf58Q8NDZ4 430 aa14.53□□□□□ -0.08
SFSWAP-201ENST00000261674 FCRL2Q96LA5 508 aaPredicted RBP14.53□□□□□ -0.08
SFSWAP-201ENST00000261674 CES1P23141 567 aa14.53□□□□□ -0.08
SFSWAP-201ENST00000261674 KCNC1P48547 511 aa14.53□□□□□ -0.08
SFSWAP-201ENST00000261674 SCNN1BP51168 640 aa14.53□□□□□ -0.08
SFSWAP-201ENST00000261674 MAPK10P53779 464 aa14.53□□□□□ -0.08
SFSWAP-201ENST00000261674 FUT11Q495W5 492 aa14.53□□□□□ -0.08
SFSWAP-201ENST00000261674 DRAXINQ8NBI3 349 aaPredicted RBP14.53□□□□□ -0.08
SFSWAP-201ENST00000261674 DDI1Q8WTU0 396 aa14.53□□□□□ -0.08
SFSWAP-201ENST00000261674 CYGBQ8WWM9 190 aa14.53□□□□□ -0.08
SFSWAP-201ENST00000261674 MYLPFQ96A32 169 aa14.53□□□□□ -0.08
SFSWAP-201ENST00000261674 PRDM16Q9HAZ2 1276 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms