RNA–Protein interactions for RNA: ENST00000256637.7

SORT1-201, Transcript of sortilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SORT1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-201ENST00000256637 TOP6BLQ8N6T0 577 aa16.97■□□□□ 0.31
SORT1-201ENST00000256637 NAXEQ8NCW5 288 aa16.97■□□□□ 0.31
SORT1-201ENST00000256637 DNAJA3Q96EY1 480 aa16.97■□□□□ 0.31
SORT1-201ENST00000256637 SEMA6AQ9H2E6 1030 aa16.97■□□□□ 0.31
SORT1-201ENST00000256637 PPP1R11O60927 126 aaPredicted RBP16.96■□□□□ 0.31
SORT1-201ENST00000256637 ATG13O75143 517 aa16.96■□□□□ 0.31
SORT1-201ENST00000256637 ATG7O95352 703 aa16.96■□□□□ 0.31
SORT1-201ENST00000256637 TYRP1P17643 537 aa16.96■□□□□ 0.31
SORT1-201ENST00000256637 MANFP55145 182 aaKnown RBP16.96■□□□□ 0.31
SORT1-201ENST00000256637 FAAP100Q0VG06 881 aa16.96■□□□□ 0.31
SORT1-201ENST00000256637 PIK3R6Q5UE93 754 aa16.96■□□□□ 0.31
SORT1-201ENST00000256637 CRTC1Q6UUV9 634 aa16.96■□□□□ 0.31
SORT1-201ENST00000256637 ZMAT2Q96NC0 199 aaKnown RBP16.96■□□□□ 0.31
SORT1-201ENST00000256637 COL1A2P08123 1366 aa16.96■□□□□ 0.31
SORT1-201ENST00000256637 H3BQ06 376 aaPredicted RBP16.96■□□□□ 0.31
SORT1-201ENST00000256637 ATP4AP20648 1035 aa16.96■□□□□ 0.31
SORT1-201ENST00000256637 SARSP49591 514 aaKnown RBP16.96■□□□□ 0.31
SORT1-201ENST00000256637 SEC24CP53992 1094 aa16.96■□□□□ 0.31
SORT1-201ENST00000256637 DSC2Q02487 901 aa16.96■□□□□ 0.31
SORT1-201ENST00000256637 CCNG2Q16589 344 aa16.96■□□□□ 0.31
SORT1-201ENST00000256637 SNX30Q5VWJ9 437 aa16.96■□□□□ 0.31
SORT1-201ENST00000256637 FRMD8P1Q9BZ68 369 aaPredicted RBP16.96■□□□□ 0.31
SORT1-201ENST00000256637 PCDH9Q9HC56 1237 aa16.96■□□□□ 0.31
SORT1-201ENST00000256637 MYBPHLA2RUH7 354 aa16.96■□□□□ 0.31
SORT1-201ENST00000256637 AAK1Q2M2I8 961 aa16.96■□□□□ 0.31
SORT1-201ENST00000256637 UNC5AQ6ZN44 842 aa16.96■□□□□ 0.31
SORT1-201ENST00000256637 PARP9Q8IXQ6 854 aa16.96■□□□□ 0.31
SORT1-201ENST00000256637 FAM126BQ8IXS8 530 aa16.96■□□□□ 0.31
SORT1-201ENST00000256637 FAM98AQ8NCA5 519 aaKnown RBP16.96■□□□□ 0.31
SORT1-201ENST00000256637 AVENQ9NQS1 362 aaPredicted RBP16.96■□□□□ 0.31
SORT1-201ENST00000256637 FBXL12Q9NXK8 326 aa16.96■□□□□ 0.31
SORT1-201ENST00000256637 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.96■□□□□ 0.31
SORT1-201ENST00000256637 HOXB2P14652 356 aa16.96■□□□□ 0.31
SORT1-201ENST00000256637 RPL7AP62424 266 aaKnown RBP16.96■□□□□ 0.31
SORT1-201ENST00000256637 CNGA2Q16280 664 aa16.96■□□□□ 0.31
SORT1-201ENST00000256637 NEK6Q9HC98 313 aa16.96■□□□□ 0.31
SORT1-201ENST00000256637 WHRNQ9P202 907 aa16.96■□□□□ 0.31
SORT1-201ENST00000256637 STOML1Q9UBI4 398 aa16.96■□□□□ 0.31
SORT1-201ENST00000256637 CNOT6Q9ULM6 557 aaKnown RBP16.96■□□□□ 0.31
SORT1-201ENST00000256637 KHNYNO15037 678 aaKnown RBP16.96■□□□□ 0.31
SORT1-201ENST00000256637 RPL10P27635 214 aaKnown RBP16.96■□□□□ 0.31
SORT1-201ENST00000256637 KCNMA1Q12791 1236 aa16.96■□□□□ 0.31
SORT1-201ENST00000256637 ILF3Q12906 894 aaKnown RBP eCLIP16.96■□□□□ 0.311e-8■■□□□ 14.2
SORT1-201ENST00000256637 DNAL1Q4LDG9 190 aa16.96■□□□□ 0.31
SORT1-201ENST00000256637 TTC33Q6PID6 262 aaPredicted RBP16.96■□□□□ 0.31
SORT1-201ENST00000256637 UNC93AQ86WB7 457 aa16.96■□□□□ 0.31
SORT1-201ENST00000256637 PYROXD2Q8N2H3 581 aa16.96■□□□□ 0.31
SORT1-201ENST00000256637 C3orf20Q8ND61 904 aa16.96■□□□□ 0.31
SORT1-201ENST00000256637 ASTN1O14525 1302 aa16.96■□□□□ 0.3
SORT1-201ENST00000256637 EFNA1P20827 205 aaPredicted RBP16.96■□□□□ 0.3
SORT1-201ENST00000256637 TTPAP49638 278 aa16.96■□□□□ 0.3
SORT1-201ENST00000256637 NRG1Q02297 640 aaPredicted RBP16.96■□□□□ 0.3
SORT1-201ENST00000256637 ZNF248Q8NDW4 579 aa16.96■□□□□ 0.3
SORT1-201ENST00000256637 RDH11Q8TC12 318 aa16.96■□□□□ 0.3
SORT1-201ENST00000256637 HCN2Q9UL51 889 aa16.96■□□□□ 0.3
SORT1-201ENST00000256637 SPEF2Q9C093 1822 aa16.95■□□□□ 0.3
SORT1-201ENST00000256637 SIGLEC16A6NMB1 481 aa16.95■□□□□ 0.3
SORT1-201ENST00000256637 KCNH1O95259 989 aa16.95■□□□□ 0.3
SORT1-201ENST00000256637 PARP6Q2NL67 630 aa16.95■□□□□ 0.3
SORT1-201ENST00000256637 OLFML2BQ68BL8 750 aa16.95■□□□□ 0.3
SORT1-201ENST00000256637 LBX2Q6XYB7 198 aa16.95■□□□□ 0.3
SORT1-201ENST00000256637 GCNT7Q6ZNI0 430 aa16.95■□□□□ 0.3
SORT1-201ENST00000256637 NEK10Q6ZWH5 1172 aa16.95■□□□□ 0.3
SORT1-201ENST00000256637 DNAJB7Q7Z6W7 309 aaPredicted RBP16.95■□□□□ 0.3
SORT1-201ENST00000256637 ECHDC2Q86YB7 292 aa16.95■□□□□ 0.3
SORT1-201ENST00000256637 REXO1L1PQ8IX06 675 aa16.95■□□□□ 0.3
SORT1-201ENST00000256637 SPPL2BQ8TCT7 592 aa16.95■□□□□ 0.3
SORT1-201ENST00000256637 EXOSC8Q96B26 276 aaKnown RBP16.95■□□□□ 0.3
SORT1-201ENST00000256637 CHST7Q9NS84 486 aa16.95■□□□□ 0.3
SORT1-201ENST00000256637 HCN3Q9P1Z3 774 aa16.95■□□□□ 0.3
SORT1-201ENST00000256637 ARHGAP20Q9P2F6 1191 aa16.95■□□□□ 0.3
SORT1-201ENST00000256637 COL14A1Q05707 1796 aaKnown RBP16.95■□□□□ 0.3
SORT1-201ENST00000256637 RICTORQ6R327 1708 aa16.95■□□□□ 0.3
SORT1-201ENST00000256637 ZNF132P52740 706 aa16.95■□□□□ 0.3
SORT1-201ENST00000256637 TAS2R41P59536 307 aa16.95■□□□□ 0.3
SORT1-201ENST00000256637 CERCAMQ5T4B2 595 aa16.95■□□□□ 0.3
SORT1-201ENST00000256637 C9orf64Q5T6V5 341 aa16.95■□□□□ 0.3
SORT1-201ENST00000256637 OR8H2Q8N162 312 aa16.95■□□□□ 0.3
SORT1-201ENST00000256637 SPATS2LQ9NUQ6 558 aaKnown RBP16.95■□□□□ 0.3
SORT1-201ENST00000256637 DCLK1O15075 740 aa16.95■□□□□ 0.3
SORT1-201ENST00000256637 CCNE2O96020 404 aa16.95■□□□□ 0.3
SORT1-201ENST00000256637 MYBPC2Q14324 1141 aa16.95■□□□□ 0.3
SORT1-201ENST00000256637 RPTNQ6XPR3 784 aa16.95■□□□□ 0.3
SORT1-201ENST00000256637 BEND5Q7L4P6 421 aa16.95■□□□□ 0.3
SORT1-201ENST00000256637 OR4K2Q8NGD2 314 aa16.95■□□□□ 0.3
SORT1-201ENST00000256637 HCN4Q9Y3Q4 1203 aa16.95■□□□□ 0.3
SORT1-201ENST00000256637 HACD1B0YJ81 288 aa16.95■□□□□ 0.3
SORT1-201ENST00000256637 TPST2O60704 377 aa16.95■□□□□ 0.3
SORT1-201ENST00000256637 ZNF544Q6NX49 715 aa16.95■□□□□ 0.3
SORT1-201ENST00000256637 POU5F2Q8N7G0 328 aa16.95■□□□□ 0.3
SORT1-201ENST00000256637 PTGR2Q8N8N7 351 aaPredicted RBP16.95■□□□□ 0.3
SORT1-201ENST00000256637 DNASE1L2Q92874 299 aa16.95■□□□□ 0.3
SORT1-201ENST00000256637 KCNMB3Q9NPA1 279 aa16.95■□□□□ 0.3
SORT1-201ENST00000256637 NDUFAF1Q9Y375 327 aa16.95■□□□□ 0.3
SORT1-201ENST00000256637 PCID2Q5JVF3 399 aa16.95■□□□□ 0.3
SORT1-201ENST00000256637 FAM45BPQ6NSW5 357 aa16.95■□□□□ 0.3
SORT1-201ENST00000256637 FAM45AQ8TCE6 357 aa16.95■□□□□ 0.3
SORT1-201ENST00000256637 FRMD6Q96NE9 622 aa16.95■□□□□ 0.3
SORT1-201ENST00000256637 BLOC1S4Q9NUP1 217 aa16.95■□□□□ 0.3
SORT1-201ENST00000256637 KLF8O95600 359 aaPredicted RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms