RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 RPRD1AQ96P16 312 aaPredicted RBP13.56□□□□□ -0.24
VHL-201ENST00000256474 NMUR1Q9HB89 426 aa13.56□□□□□ -0.24
VHL-201ENST00000256474 CACNA2D2Q9NY47 1150 aa13.56□□□□□ -0.24
VHL-201ENST00000256474 THEGQ9P2T0 379 aa13.56□□□□□ -0.24
VHL-201ENST00000256474 VWA7Q9Y334 891 aa13.56□□□□□ -0.24
VHL-201ENST00000256474 MYADML2A6NDP7 307 aa13.56□□□□□ -0.24
VHL-201ENST00000256474 F2P00734 622 aa13.56□□□□□ -0.24
VHL-201ENST00000256474 KPNA2P52292 529 aaKnown RBP13.56□□□□□ -0.24
VHL-201ENST00000256474 TSPY1Q01534 308 aa13.56□□□□□ -0.24
VHL-201ENST00000256474 TRIM25Q14258 630 aaKnown RBP13.56□□□□□ -0.24
VHL-201ENST00000256474 FAM43BQ6ZT52 329 aaPredicted RBP13.56□□□□□ -0.24
VHL-201ENST00000256474 OR13C4Q8NGS5 318 aa13.56□□□□□ -0.24
VHL-201ENST00000256474 KCTD13Q8WZ19 329 aa13.56□□□□□ -0.24
VHL-201ENST00000256474 NTAN1Q96AB6 310 aa13.56□□□□□ -0.24
VHL-201ENST00000256474 VAT1Q99536 393 aa13.56□□□□□ -0.24
VHL-201ENST00000256474 EML4Q9HC35 981 aaKnown RBP13.56□□□□□ -0.24
VHL-201ENST00000256474 PREBQ9HCU5 417 aa13.56□□□□□ -0.24
VHL-201ENST00000256474 NSMCE4AQ9NXX6 385 aa13.56□□□□□ -0.24
VHL-201ENST00000256474 PSME4Q14997 1843 aa13.56□□□□□ -0.24
VHL-201ENST00000256474 E9PAM4 449 aa13.56□□□□□ -0.24
VHL-201ENST00000256474 NRP2O60462 931 aa13.56□□□□□ -0.24
VHL-201ENST00000256474 SCNN1AP37088 669 aa13.56□□□□□ -0.24
VHL-201ENST00000256474 YAP1P46937 504 aaKnown RBP13.56□□□□□ -0.24
VHL-201ENST00000256474 SERPINH1P50454 418 aaKnown RBP13.56□□□□□ -0.24
VHL-201ENST00000256474 CRYBB1P53674 252 aaPredicted RBP13.56□□□□□ -0.24
VHL-201ENST00000256474 CDKN2DP55273 166 aa13.56□□□□□ -0.24
VHL-201ENST00000256474 ZIK1Q3SY52 487 aaPredicted RBP13.56□□□□□ -0.24
VHL-201ENST00000256474 B3GNT6Q6ZMB0 384 aa13.56□□□□□ -0.24
VHL-201ENST00000256474 LPCAT2Q7L5N7 544 aa13.56□□□□□ -0.24
VHL-201ENST00000256474 MRGPRX2Q96LB1 330 aa13.56□□□□□ -0.24
VHL-201ENST00000256474 BTBD9Q96Q07 612 aa13.56□□□□□ -0.24
VHL-201ENST00000256474 EFHD1Q9BUP0 239 aa13.56□□□□□ -0.24
VHL-201ENST00000256474 SPAG4Q9NPE6 437 aa13.56□□□□□ -0.24
VHL-201ENST00000256474 SLCO1B7G3V0H7 640 aa13.55□□□□□ -0.24
VHL-201ENST00000256474 MAFKO60675 156 aa13.55□□□□□ -0.24
VHL-201ENST00000256474 PCNAP12004 261 aa13.55□□□□□ -0.24
VHL-201ENST00000256474 PRDX6P30041 224 aa13.55□□□□□ -0.24
VHL-201ENST00000256474 FMO4P31512 558 aa13.55□□□□□ -0.24
VHL-201ENST00000256474 FOXA1P55317 472 aa13.55□□□□□ -0.24
VHL-201ENST00000256474 PLCL1Q15111 1095 aa13.55□□□□□ -0.24
VHL-201ENST00000256474 ZFP1Q6P2D0 407 aa13.55□□□□□ -0.24
VHL-201ENST00000256474 CLVS1Q8IUQ0 354 aaPredicted RBP13.55□□□□□ -0.24
VHL-201ENST00000256474 CBR4Q8N4T8 237 aa13.55□□□□□ -0.24
VHL-201ENST00000256474 NACA2Q9H009 215 aa13.55□□□□□ -0.24
VHL-201ENST00000256474 KATNBL1Q9H079 304 aa13.55□□□□□ -0.24
VHL-201ENST00000256474 AGO3Q9H9G7 860 aaKnown RBP13.55□□□□□ -0.24
VHL-201ENST00000256474 SLC27A5Q9Y2P5 690 aa13.55□□□□□ -0.24
VHL-201ENST00000256474 PCDHGA7Q9Y5G6 932 aa13.55□□□□□ -0.24
VHL-201ENST00000256474 A0A0J9YYE9 177 aa13.55□□□□□ -0.24
VHL-201ENST00000256474 FBP2O00757 339 aa13.55□□□□□ -0.24
VHL-201ENST00000256474 BCAS2O75934 225 aaPredicted RBP13.55□□□□□ -0.24
VHL-201ENST00000256474 GNAO1P09471 354 aa13.55□□□□□ -0.24
VHL-201ENST00000256474 ODC1P11926 461 aa13.55□□□□□ -0.24
VHL-201ENST00000256474 GRB7Q14451 532 aa13.55□□□□□ -0.24
VHL-201ENST00000256474 FSCN1Q16658 493 aaKnown RBP13.55□□□□□ -0.24
VHL-201ENST00000256474 ALFQ53S48 1182 aa13.55□□□□□ -0.24
VHL-201ENST00000256474 ARHGAP12Q8IWW6 846 aa13.55□□□□□ -0.24
VHL-201ENST00000256474 SLC9A7Q96T83 725 aa13.55□□□□□ -0.24
VHL-201ENST00000256474 CCDC68Q9H2F9 335 aa13.55□□□□□ -0.24
VHL-201ENST00000256474 SLC38A7Q9NVC3 462 aa13.55□□□□□ -0.24
VHL-201ENST00000256474 TRIP12Q14669 1992 aaPredicted RBP13.55□□□□□ -0.24
VHL-201ENST00000256474 HGFP14210 728 aa13.55□□□□□ -0.24
VHL-201ENST00000256474 OR1G1P47890 313 aa13.55□□□□□ -0.24
VHL-201ENST00000256474 APLP1P51693 650 aa13.55□□□□□ -0.24
VHL-201ENST00000256474 PPP1R8Q12972 351 aaKnown RBP13.55□□□□□ -0.24
VHL-201ENST00000256474 SEMA3BQ13214 749 aa13.55□□□□□ -0.24
VHL-201ENST00000256474 DENND5AQ6IQ26 1287 aa13.55□□□□□ -0.24
VHL-201ENST00000256474 TTC33Q6PID6 262 aaPredicted RBP13.55□□□□□ -0.24
VHL-201ENST00000256474 SHCBP1Q8NEM2 672 aa13.55□□□□□ -0.24
VHL-201ENST00000256474 NUDT8Q8WV74 236 aa13.55□□□□□ -0.24
VHL-201ENST00000256474 PBXIP1Q96AQ6 731 aa13.55□□□□□ -0.24
VHL-201ENST00000256474 PPP1R10Q96QC0 940 aaKnown RBP13.55□□□□□ -0.24
VHL-201ENST00000256474 SEMA3CQ99985 751 aa13.55□□□□□ -0.24
VHL-201ENST00000256474 BPIFA1Q9NP55 256 aa13.55□□□□□ -0.24
VHL-201ENST00000256474 ENTPD7Q9NQZ7 604 aa13.55□□□□□ -0.24
VHL-201ENST00000256474 ZDHHC7Q9NXF8 308 aa13.55□□□□□ -0.24
VHL-201ENST00000256474 CDH9Q9ULB4 789 aa13.55□□□□□ -0.24
VHL-201ENST00000256474 PIP5K1BO14986 540 aa13.54□□□□□ -0.24
VHL-201ENST00000256474 MATN3O15232 486 aa13.54□□□□□ -0.24
VHL-201ENST00000256474 MAGEA12P43365 314 aa13.54□□□□□ -0.24
VHL-201ENST00000256474 YBX1P67809 324 aaKnown RBP13.54□□□□□ -0.24
VHL-201ENST00000256474 LSAMPQ13449 338 aa13.54□□□□□ -0.24
VHL-201ENST00000256474 ATAD1Q8NBU5 361 aa13.54□□□□□ -0.24
VHL-201ENST00000256474 CATSPER1Q8NEC5 780 aa13.54□□□□□ -0.24
VHL-201ENST00000256474 ADCY4Q8NFM4 1077 aa13.54□□□□□ -0.24
VHL-201ENST00000256474 PRICKLE1Q96MT3 831 aaPredicted RBP13.54□□□□□ -0.24
VHL-201ENST00000256474 AKTIPQ9H8T0 292 aa13.54□□□□□ -0.24
VHL-201ENST00000256474 C5orf42Q9H799 3197 aa13.54□□□□□ -0.24
VHL-201ENST00000256474 PARP14Q460N5 1801 aa13.54□□□□□ -0.24
VHL-201ENST00000256474 SMIM31A0A1B0GVY4 71 aa13.54□□□□□ -0.24
VHL-201ENST00000256474 VILLO15195 856 aa13.54□□□□□ -0.24
VHL-201ENST00000256474 MAGEB3O15480 346 aa13.54□□□□□ -0.24
VHL-201ENST00000256474 HSPA8P11142 646 aaKnown RBP13.54□□□□□ -0.24
VHL-201ENST00000256474 HADHAP40939 763 aa13.54□□□□□ -0.24
VHL-201ENST00000256474 RGS2P41220 211 aa13.54□□□□□ -0.24
VHL-201ENST00000256474 INHBCP55103 352 aa13.54□□□□□ -0.24
VHL-201ENST00000256474 FOXD4Q12950 439 aaPredicted RBP13.54□□□□□ -0.24
VHL-201ENST00000256474 PTPRRQ15256 657 aa13.54□□□□□ -0.24
VHL-201ENST00000256474 AGMOQ6ZNB7 445 aa13.54□□□□□ -0.24
VHL-201ENST00000256474 ZFAND2BQ8WV99 257 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms