RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 USP46P62068 366 aa18.75■□□□□ 0.59
SMARCC1-201ENST00000254480 PPIDQ08752 370 aaKnown RBP18.75■□□□□ 0.59
SMARCC1-201ENST00000254480 ZNHIT3Q15649 155 aaPredicted RBP18.75■□□□□ 0.59
SMARCC1-201ENST00000254480 NAIF1Q69YI7 327 aaPredicted RBP18.75■□□□□ 0.59
SMARCC1-201ENST00000254480 BBS12Q6ZW61 710 aa18.75■□□□□ 0.59
SMARCC1-201ENST00000254480 SH3BP5LQ7L8J4 393 aa18.75■□□□□ 0.59
SMARCC1-201ENST00000254480 PACS2Q86VP3 889 aa18.75■□□□□ 0.59
SMARCC1-201ENST00000254480 C8orf59Q8N0T1 100 aaPredicted RBP18.75■□□□□ 0.59
SMARCC1-201ENST00000254480 AGO3Q9H9G7 860 aaKnown RBP18.75■□□□□ 0.59
SMARCC1-201ENST00000254480 ATAD3AQ9NVI7 634 aa18.75■□□□□ 0.59
SMARCC1-201ENST00000254480 NDUFA13Q9P0J0 144 aa18.75■□□□□ 0.59
SMARCC1-201ENST00000254480 EME2A4GXA9 379 aaPredicted RBP18.75■□□□□ 0.59
SMARCC1-201ENST00000254480 PGM3O95394 542 aa18.75■□□□□ 0.59
SMARCC1-201ENST00000254480 SLC35G4P0C7Q5 338 aa18.75■□□□□ 0.59
SMARCC1-201ENST00000254480 IFNGR2P38484 337 aa18.75■□□□□ 0.59
SMARCC1-201ENST00000254480 SQLEQ14534 574 aa18.75■□□□□ 0.59
SMARCC1-201ENST00000254480 CDC73Q6P1J9 531 aa18.75■□□□□ 0.59
SMARCC1-201ENST00000254480 PSME2Q9UL46 239 aa18.75■□□□□ 0.59
SMARCC1-201ENST00000254480 COQ6Q9Y2Z9 468 aa18.75■□□□□ 0.59
SMARCC1-201ENST00000254480 NR2E3Q9Y5X4 410 aa18.75■□□□□ 0.59
SMARCC1-201ENST00000254480 SMIM28A0A1B0GU29 152 aa18.75■□□□□ 0.59
SMARCC1-201ENST00000254480 TCRBV7S2A1N4TA0A589 114 aa18.75■□□□□ 0.59
SMARCC1-201ENST00000254480 PLSCR1O15162 318 aa18.75■□□□□ 0.59
SMARCC1-201ENST00000254480 PSRC1Q6PGN9 363 aaPredicted RBP18.75■□□□□ 0.59
SMARCC1-201ENST00000254480 ABHD15Q6UXT9 468 aa18.75■□□□□ 0.59
SMARCC1-201ENST00000254480 PPTC7Q8NI37 304 aa18.75■□□□□ 0.59
SMARCC1-201ENST00000254480 WDR55Q9H6Y2 383 aaPredicted RBP18.75■□□□□ 0.59
SMARCC1-201ENST00000254480 RIMBP3CA6NJZ7 1639 aa18.74■□□□□ 0.59
SMARCC1-201ENST00000254480 RIMBP3BA6NNM3 1639 aa18.74■□□□□ 0.59
SMARCC1-201ENST00000254480 RIMBP3Q9UFD9 1639 aa18.74■□□□□ 0.59
SMARCC1-201ENST00000254480 INHBEP58166 350 aa18.74■□□□□ 0.59
SMARCC1-201ENST00000254480 ZFP1Q6P2D0 407 aa18.74■□□□□ 0.59
SMARCC1-201ENST00000254480 HIPK1Q86Z02 1210 aa18.74■□□□□ 0.59
SMARCC1-201ENST00000254480 ZNF655Q8N720 491 aaPredicted RBP18.74■□□□□ 0.59
SMARCC1-201ENST00000254480 OSER1Q9NX31 292 aa18.74■□□□□ 0.59
SMARCC1-201ENST00000254480 GULP1Q9UBP9 304 aa18.74■□□□□ 0.59
SMARCC1-201ENST00000254480 ANGPT4Q9Y264 503 aa18.74■□□□□ 0.59
SMARCC1-201ENST00000254480 GUCY1B2O75343 617 aa18.74■□□□□ 0.59
SMARCC1-201ENST00000254480 FTH1P02794 183 aa18.74■□□□□ 0.59
SMARCC1-201ENST00000254480 UGT2B4P06133 528 aa18.74■□□□□ 0.59
SMARCC1-201ENST00000254480 TM4SF1P30408 202 aa18.74■□□□□ 0.59
SMARCC1-201ENST00000254480 PYROXD2Q8N2H3 581 aa18.74■□□□□ 0.59
SMARCC1-201ENST00000254480 AGAP11Q8TF27 550 aa18.74■□□□□ 0.59
SMARCC1-201ENST00000254480 MRPL57Q9BQC6 102 aaKnown RBP18.74■□□□□ 0.59
SMARCC1-201ENST00000254480 ELL3Q9HB65 397 aaPredicted RBP18.74■□□□□ 0.59
SMARCC1-201ENST00000254480 C15orf41Q9Y2V0 281 aa18.74■□□□□ 0.59
SMARCC1-201ENST00000254480 MTF2Q9Y483 593 aaPredicted RBP18.74■□□□□ 0.59
SMARCC1-201ENST00000254480 MFSD11O43934 449 aa18.74■□□□□ 0.59
SMARCC1-201ENST00000254480 MLYCDO95822 493 aa18.74■□□□□ 0.59
SMARCC1-201ENST00000254480 GLUD1P00367 558 aa18.74■□□□□ 0.59
SMARCC1-201ENST00000254480 CORO1AP31146 461 aaKnown RBP18.74■□□□□ 0.59
SMARCC1-201ENST00000254480 PSEN1P49768 467 aa18.74■□□□□ 0.59
SMARCC1-201ENST00000254480 KCNA10Q16322 511 aa18.74■□□□□ 0.59
SMARCC1-201ENST00000254480 LRRC38Q5VT99 294 aa18.74■□□□□ 0.59
SMARCC1-201ENST00000254480 DUPD1Q68J44 220 aa18.74■□□□□ 0.59
SMARCC1-201ENST00000254480 C12orf50Q8NA57 414 aaPredicted RBP18.74■□□□□ 0.59
SMARCC1-201ENST00000254480 ENKURQ8TC29 256 aa18.74■□□□□ 0.59
SMARCC1-201ENST00000254480 CD99L2Q8TCZ2 262 aa18.74■□□□□ 0.59
SMARCC1-201ENST00000254480 MFSD14AQ96MC6 490 aa18.74■□□□□ 0.59
SMARCC1-201ENST00000254480 QRFPRQ96P65 431 aa18.74■□□□□ 0.59
SMARCC1-201ENST00000254480 ZNF184Q99676 751 aaPredicted RBP18.74■□□□□ 0.59
SMARCC1-201ENST00000254480 AARSD1Q9BTE6 412 aaKnown RBP18.74■□□□□ 0.59
SMARCC1-201ENST00000254480 TBC1D10AQ9BXI6 508 aa18.74■□□□□ 0.59
SMARCC1-201ENST00000254480 SAR1AQ9NR31 198 aa18.74■□□□□ 0.59
SMARCC1-201ENST00000254480 ZNF541Q9H0D2 1346 aa18.74■□□□□ 0.59
SMARCC1-201ENST00000254480 ITGAXP20702 1163 aa18.74■□□□□ 0.59
SMARCC1-201ENST00000254480 SPIBQ01892 262 aa18.74■□□□□ 0.59
SMARCC1-201ENST00000254480 RALGDSQ12967 914 aa18.74■□□□□ 0.59
SMARCC1-201ENST00000254480 ZNF549Q6P9A3 640 aa18.74■□□□□ 0.59
SMARCC1-201ENST00000254480 B3GALT6Q96L58 329 aa18.74■□□□□ 0.59
SMARCC1-201ENST00000254480 MROH2AA6NES4 1674 aa18.74■□□□□ 0.59
SMARCC1-201ENST00000254480 INO80DQ53TQ3 878 aaPredicted RBP18.74■□□□□ 0.59
SMARCC1-201ENST00000254480 PACS1Q6VY07 963 aa18.74■□□□□ 0.59
SMARCC1-201ENST00000254480 UBE2R2Q712K3 238 aaPredicted RBP18.74■□□□□ 0.59
SMARCC1-201ENST00000254480 RAD51AP1Q96B01 352 aa18.74■□□□□ 0.59
SMARCC1-201ENST00000254480 S100A13Q99584 98 aa18.74■□□□□ 0.59
SMARCC1-201ENST00000254480 LPIN3Q9BQK8 851 aa18.74■□□□□ 0.59
SMARCC1-201ENST00000254480 AKAP7Q9P0M2 348 aaPredicted RBP18.74■□□□□ 0.59
SMARCC1-201ENST00000254480 MED26O95402 600 aa18.73■□□□□ 0.59
SMARCC1-201ENST00000254480 RPL17P18621 184 aaKnown RBP18.73■□□□□ 0.59
SMARCC1-201ENST00000254480 ZNF135P52742 658 aaPredicted RBP18.73■□□□□ 0.59
SMARCC1-201ENST00000254480 SEMG2Q02383 582 aa18.73■□□□□ 0.59
SMARCC1-201ENST00000254480 CHADLQ6NUI6 762 aa18.73■□□□□ 0.59
SMARCC1-201ENST00000254480 OR4K2Q8NGD2 314 aa18.73■□□□□ 0.59
SMARCC1-201ENST00000254480 TRAPPC9Q96Q05 1148 aa18.73■□□□□ 0.59
SMARCC1-201ENST00000254480 KCTD15Q96SI1 283 aaPredicted RBP18.73■□□□□ 0.59
SMARCC1-201ENST00000254480 EPB41L1Q9H4G0 881 aa18.73■□□□□ 0.59
SMARCC1-201ENST00000254480 PADI3Q9ULW8 664 aa18.73■□□□□ 0.59
SMARCC1-201ENST00000254480 LRCH1Q9Y2L9 728 aa18.73■□□□□ 0.59
SMARCC1-201ENST00000254480 C9JVG2 144 aa18.73■□□□□ 0.59
SMARCC1-201ENST00000254480 SCN2BO60939 215 aa18.73■□□□□ 0.59
SMARCC1-201ENST00000254480 MFN2O95140 757 aa18.73■□□□□ 0.59
SMARCC1-201ENST00000254480 C1RP00736 705 aa18.73■□□□□ 0.59
SMARCC1-201ENST00000254480 GBE1Q04446 702 aa18.73■□□□□ 0.59
SMARCC1-201ENST00000254480 KLHL12Q53G59 568 aa18.73■□□□□ 0.59
SMARCC1-201ENST00000254480 TMC5Q6UXY8 1006 aa18.73■□□□□ 0.59
SMARCC1-201ENST00000254480 AGMOQ6ZNB7 445 aa18.73■□□□□ 0.59
SMARCC1-201ENST00000254480 TERB1Q8NA31 727 aa18.73■□□□□ 0.59
SMARCC1-201ENST00000254480 OR4A15Q8NGL6 344 aa18.73■□□□□ 0.59
SMARCC1-201ENST00000254480 OR52E6Q96RD3 313 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms