RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 NPNTQ6UXI9 565 aa23.06■■□□□ 1.28
LSM4-201ENST00000252816 RFX6Q8HWS3 928 aa23.06■■□□□ 1.28
LSM4-201ENST00000252816 CCDC13Q8IYE1 715 aa23.06■■□□□ 1.28
LSM4-201ENST00000252816 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP23.06■■□□□ 1.28
LSM4-201ENST00000252816 CCNYQ8ND76 341 aa23.06■■□□□ 1.28
LSM4-201ENST00000252816 MAK16Q9BXY0 300 aaKnown RBP23.06■■□□□ 1.28
LSM4-201ENST00000252816 POLR1EQ9GZS1 481 aaKnown RBP23.06■■□□□ 1.28
LSM4-201ENST00000252816 LUC7LQ9NQ29 371 aaKnown RBP23.06■■□□□ 1.28
LSM4-201ENST00000252816 PNMA8BQ9ULN7 279 aaPredicted RBP23.06■■□□□ 1.28
LSM4-201ENST00000252816 NEUROG3Q9Y4Z2 214 aa23.06■■□□□ 1.28
LSM4-201ENST00000252816 RAI2Q9Y5P3 530 aa23.06■■□□□ 1.28
LSM4-201ENST00000252816 A0A1W2PQ67 120 aa23.05■■□□□ 1.28
LSM4-201ENST00000252816 KCNK1O00180 336 aa23.05■■□□□ 1.28
LSM4-201ENST00000252816 PSTPIP1O43586 416 aa23.05■■□□□ 1.28
LSM4-201ENST00000252816 RECQL5O94762 991 aaPredicted RBP23.05■■□□□ 1.28
LSM4-201ENST00000252816 ELFN1P0C7U0 828 aa23.05■■□□□ 1.28
LSM4-201ENST00000252816 CDKN2BP42772 138 aa23.05■■□□□ 1.28
LSM4-201ENST00000252816 MARCKSL1P49006 195 aa23.05■■□□□ 1.28
LSM4-201ENST00000252816 YPEL5P62699 121 aa23.05■■□□□ 1.28
LSM4-201ENST00000252816 PPIDQ08752 370 aaKnown RBP23.05■■□□□ 1.28
LSM4-201ENST00000252816 NIPAL4Q0D2K0 466 aa23.05■■□□□ 1.28
LSM4-201ENST00000252816 PTPRRQ15256 657 aa23.05■■□□□ 1.28
LSM4-201ENST00000252816 CCDC157Q569K6 752 aa23.05■■□□□ 1.28
LSM4-201ENST00000252816 TMEM139Q8IV31 216 aa23.05■■□□□ 1.28
LSM4-201ENST00000252816 TPCN2Q8NHX9 752 aa23.05■■□□□ 1.28
LSM4-201ENST00000252816 ARRDC2Q8TBH0 407 aa23.05■■□□□ 1.28
LSM4-201ENST00000252816 ZNF830Q96NB3 372 aaPredicted RBP23.05■■□□□ 1.28
LSM4-201ENST00000252816 OLFM3Q96PB7 478 aa23.05■■□□□ 1.28
LSM4-201ENST00000252816 ANP32EQ9BTT0 268 aa23.05■■□□□ 1.28
LSM4-201ENST00000252816 TMEM121BQ9BXQ6 578 aaPredicted RBP23.05■■□□□ 1.28
LSM4-201ENST00000252816 AMACRQ9UHK6 382 aa23.05■■□□□ 1.28
LSM4-201ENST00000252816 PHTF1Q9UMS5 762 aa23.05■■□□□ 1.28
LSM4-201ENST00000252816 TTLL3Q9Y4R7 772 aa23.05■■□□□ 1.28
LSM4-201ENST00000252816 DUSP10Q9Y6W6 482 aa23.05■■□□□ 1.28
LSM4-201ENST00000252816 MAP1BP46821 2468 aaKnown RBP23.04■■□□□ 1.28
LSM4-201ENST00000252816 ASPMQ8IZT6 3477 aa23.04■■□□□ 1.28
LSM4-201ENST00000252816 FAM221BA6H8Z2 402 aa23.04■■□□□ 1.28
LSM4-201ENST00000252816 FFAR2O15552 330 aa23.04■■□□□ 1.28
LSM4-201ENST00000252816 SIGLEC6O43699 453 aa23.04■■□□□ 1.28
LSM4-201ENST00000252816 JCHAINP01591 159 aa23.04■■□□□ 1.28
LSM4-201ENST00000252816 PDHA1P08559 390 aa23.04■■□□□ 1.28
LSM4-201ENST00000252816 THOP1P52888 689 aa23.04■■□□□ 1.28
LSM4-201ENST00000252816 HNRNPKP61978 463 aaKnown RBP eCLIP23.04■■□□□ 1.285e-6■□□□□ 11.2
LSM4-201ENST00000252816 DYNLT1P63172 113 aa23.04■■□□□ 1.28
LSM4-201ENST00000252816 INPP5AQ14642 412 aa23.04■■□□□ 1.28
LSM4-201ENST00000252816 LLGL1Q15334 1064 aa23.04■■□□□ 1.28
LSM4-201ENST00000252816 PROX2Q3B8N5 592 aa23.04■■□□□ 1.28
LSM4-201ENST00000252816 ODF2Q5BJF6 829 aa23.04■■□□□ 1.28
LSM4-201ENST00000252816 ARMC12Q5T9G4 340 aa23.04■■□□□ 1.28
LSM4-201ENST00000252816 C11orf63Q6NUN7 778 aa23.04■■□□□ 1.28
LSM4-201ENST00000252816 PLA2G15Q8NCC3 412 aa23.04■■□□□ 1.28
LSM4-201ENST00000252816 ACRBPQ8NEB7 543 aa23.04■■□□□ 1.28
LSM4-201ENST00000252816 PIH1D2Q8WWB5 315 aa23.04■■□□□ 1.28
LSM4-201ENST00000252816 TCEAL2Q9H3H9 227 aaPredicted RBP23.04■■□□□ 1.28
LSM4-201ENST00000252816 EPG5Q9HCE0 2579 aa23.04■■□□□ 1.28
LSM4-201ENST00000252816 TOR1BO14657 336 aa23.03■■□□□ 1.28
LSM4-201ENST00000252816 FZD6O60353 706 aa23.03■■□□□ 1.28
LSM4-201ENST00000252816 NEBLO76041 1014 aa23.03■■□□□ 1.28
LSM4-201ENST00000252816 PCCBP05166 539 aa23.03■■□□□ 1.28
LSM4-201ENST00000252816 KRT10P13645 584 aa23.03■■□□□ 1.28
LSM4-201ENST00000252816 ZFXP17010 805 aaPredicted RBP23.03■■□□□ 1.28
LSM4-201ENST00000252816 JUNDP17535 347 aa23.03■■□□□ 1.28
LSM4-201ENST00000252816 LHCGRP22888 699 aa23.03■■□□□ 1.28
LSM4-201ENST00000252816 CDC25BP30305 580 aa23.03■■□□□ 1.28
LSM4-201ENST00000252816 VIPR1P32241 457 aa23.03■■□□□ 1.28
LSM4-201ENST00000252816 ACADVLP49748 655 aa23.03■■□□□ 1.28
LSM4-201ENST00000252816 ZBTB17Q13105 803 aa23.03■■□□□ 1.28
LSM4-201ENST00000252816 ZNF211Q13398 564 aaPredicted RBP23.03■■□□□ 1.28
LSM4-201ENST00000252816 PTK2BQ14289 1009 aa23.03■■□□□ 1.28
LSM4-201ENST00000252816 CNGA3Q16281 694 aa23.03■■□□□ 1.28
LSM4-201ENST00000252816 SPOCD1Q6ZMY3 1216 aa23.03■■□□□ 1.28
LSM4-201ENST00000252816 MACC1Q6ZN28 852 aa23.03■■□□□ 1.28
LSM4-201ENST00000252816 RBFAQ8N0V3 343 aa23.03■■□□□ 1.28
LSM4-201ENST00000252816 CNTD1Q8N815 330 aa23.03■■□□□ 1.28
LSM4-201ENST00000252816 SPC24Q8NBT2 197 aa23.03■■□□□ 1.28
LSM4-201ENST00000252816 ZNF548Q8NEK5 533 aaPredicted RBP23.03■■□□□ 1.28
LSM4-201ENST00000252816 OR4C6Q8NH72 309 aa23.03■■□□□ 1.28
LSM4-201ENST00000252816 GATA6Q92908 595 aa23.03■■□□□ 1.28
LSM4-201ENST00000252816 SMIM14Q96QK8 99 aa23.03■■□□□ 1.28
LSM4-201ENST00000252816 IL12RB2Q99665 862 aa23.03■■□□□ 1.28
LSM4-201ENST00000252816 BAG1Q99933 345 aaPredicted RBP23.03■■□□□ 1.28
LSM4-201ENST00000252816 LACRTQ9GZZ8 138 aa23.03■■□□□ 1.28
LSM4-201ENST00000252816 MSRB2Q9Y3D2 182 aa23.03■■□□□ 1.28
LSM4-201ENST00000252816 OR1A2Q9Y585 309 aa23.03■■□□□ 1.28
LSM4-201ENST00000252816 NPIPB15A6NHN6 443 aaPredicted RBP23.02■■□□□ 1.28
LSM4-201ENST00000252816 C1QTNF9BB2RNN3 333 aa23.02■■□□□ 1.28
LSM4-201ENST00000252816 HEXIM1O94992 359 aaKnown RBP23.02■■□□□ 1.28
LSM4-201ENST00000252816 C1QTNF9P0C862 333 aa23.02■■□□□ 1.28
LSM4-201ENST00000252816 CTPS1P17812 591 aa23.02■■□□□ 1.28
LSM4-201ENST00000252816 CES1P23141 567 aa23.02■■□□□ 1.28
LSM4-201ENST00000252816 IFI35P80217 286 aaPredicted RBP23.02■■□□□ 1.28
LSM4-201ENST00000252816 ADCY2Q08462 1091 aa23.02■■□□□ 1.28
LSM4-201ENST00000252816 ACOX1Q15067 660 aa23.02■■□□□ 1.28
LSM4-201ENST00000252816 NYAP1Q6ZVC0 841 aa23.02■■□□□ 1.28
LSM4-201ENST00000252816 B4GALNT4Q76KP1 1039 aa23.02■■□□□ 1.28
LSM4-201ENST00000252816 TSPAN33Q86UF1 283 aa23.02■■□□□ 1.28
LSM4-201ENST00000252816 KATNAL2Q8IYT4 538 aa23.02■■□□□ 1.28
LSM4-201ENST00000252816 KRT35Q92764 455 aa23.02■■□□□ 1.28
LSM4-201ENST00000252816 SCRN2Q96FV2 425 aa23.02■■□□□ 1.28
LSM4-201ENST00000252816 COQ10AQ96MF6 247 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms