RNA–Protein interactions for RNA: ENST00000252542.8

SAFB2-201, Transcript of scaffold attachment factor B2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAFB2, Length 3,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB2-201ENST00000252542 NBNO60934 754 aa15.11■□□□□ 0.01
SAFB2-201ENST00000252542 SNNO75324 88 aaPredicted RBP15.11■□□□□ 0.01
SAFB2-201ENST00000252542 SERPINF2P08697 491 aa15.11■□□□□ 0.01
SAFB2-201ENST00000252542 ATP5C1P36542 298 aaKnown RBP15.11■□□□□ 0.01
SAFB2-201ENST00000252542 CDC16Q13042 620 aa15.11■□□□□ 0.01
SAFB2-201ENST00000252542 ATXN7L2Q5T6C5 722 aaPredicted RBP15.11■□□□□ 0.01
SAFB2-201ENST00000252542 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.11■□□□□ 0.01
SAFB2-201ENST00000252542 LZTR1Q8N653 840 aa15.11■□□□□ 0.01
SAFB2-201ENST00000252542 FBXO22Q8NEZ5 403 aa15.11■□□□□ 0.01
SAFB2-201ENST00000252542 IRGQQ8WZA9 623 aa15.11■□□□□ 0.01
SAFB2-201ENST00000252542 HAPLN3Q96S86 360 aa15.11■□□□□ 0.01
SAFB2-201ENST00000252542 CREBZFQ9NS37 354 aa15.11■□□□□ 0.01
SAFB2-201ENST00000252542 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.11■□□□□ 0.01
SAFB2-201ENST00000252542 RNASEH1O60930 286 aaKnown RBP15.11■□□□□ 0.01
SAFB2-201ENST00000252542 GLP2RO95838 553 aa15.11■□□□□ 0.01
SAFB2-201ENST00000252542 SLC2A3P11169 496 aa15.11■□□□□ 0.01
SAFB2-201ENST00000252542 ZNF177Q13360 481 aaPredicted RBP15.11■□□□□ 0.01
SAFB2-201ENST00000252542 POM121L1PQ3SYA9 428 aa15.11■□□□□ 0.01
SAFB2-201ENST00000252542 HECTD2Q5U5R9 776 aa15.11■□□□□ 0.01
SAFB2-201ENST00000252542 LIPMQ5VYY2 423 aa15.11■□□□□ 0.01
SAFB2-201ENST00000252542 KCTD11Q693B1 232 aa15.11■□□□□ 0.01
SAFB2-201ENST00000252542 CENPLQ8N0S6 344 aaPredicted RBP15.11■□□□□ 0.01
SAFB2-201ENST00000252542 RPL10LQ96L21 214 aaKnown RBP15.11■□□□□ 0.01
SAFB2-201ENST00000252542 TRAPPC9Q96Q05 1148 aa15.11■□□□□ 0.01
SAFB2-201ENST00000252542 TTPALQ9BTX7 342 aa15.11■□□□□ 0.01
SAFB2-201ENST00000252542 TIMM22Q9Y584 194 aa15.11■□□□□ 0.01
SAFB2-201ENST00000252542 SLC4A7Q9Y6M7 1214 aa15.11■□□□□ 0.01
SAFB2-201ENST00000252542 SF3B1O75533 1304 aaKnown RBP eCLIP15.11■□□□□ 0.012e-6■■■■■ 32.9
SAFB2-201ENST00000252542 FAM155AB1AL88 458 aaPredicted RBP15.11■□□□□ 0.01
SAFB2-201ENST00000252542 TNFRSF10BO14763 440 aa15.11■□□□□ 0.01
SAFB2-201ENST00000252542 SRP72O76094 671 aaKnown RBP15.11■□□□□ 0.01
SAFB2-201ENST00000252542 GUCA1CO95843 209 aa15.11■□□□□ 0.01
SAFB2-201ENST00000252542 GOT2P00505 430 aaKnown RBP15.11■□□□□ 0.01
SAFB2-201ENST00000252542 CKMP06732 381 aa15.11■□□□□ 0.01
SAFB2-201ENST00000252542 TACR2P21452 398 aa15.11■□□□□ 0.01
SAFB2-201ENST00000252542 AIF1P55008 147 aa15.11■□□□□ 0.01
SAFB2-201ENST00000252542 OXCT1P55809 520 aa15.11■□□□□ 0.01
SAFB2-201ENST00000252542 RALGDSQ12967 914 aa15.11■□□□□ 0.01
SAFB2-201ENST00000252542 DYNC1I2Q13409 638 aaKnown RBP15.11■□□□□ 0.01
SAFB2-201ENST00000252542 DNAL1Q4LDG9 190 aa15.11■□□□□ 0.01
SAFB2-201ENST00000252542 SGO1Q5FBB7 561 aa15.11■□□□□ 0.01
SAFB2-201ENST00000252542 BBS5Q8N3I7 341 aa15.11■□□□□ 0.01
SAFB2-201ENST00000252542 TRPC4APQ8TEL6 797 aa15.11■□□□□ 0.01
SAFB2-201ENST00000252542 GATA6Q92908 595 aa15.11■□□□□ 0.01
SAFB2-201ENST00000252542 BTN2A3PQ96KV6 586 aa15.11■□□□□ 0.01
SAFB2-201ENST00000252542 MRPL46Q9H2W6 279 aaKnown RBP15.11■□□□□ 0.01
SAFB2-201ENST00000252542 NOL6Q9H6R4 1146 aaKnown RBP15.11■□□□□ 0.01
SAFB2-201ENST00000252542 RHBDL2Q9NX52 303 aa15.11■□□□□ 0.01
SAFB2-201ENST00000252542 ARHGAP26Q9UNA1 814 aa15.11■□□□□ 0.01
SAFB2-201ENST00000252542 E5RI56 91 aa15.1■□□□□ 0.01
SAFB2-201ENST00000252542 SELPP16109 830 aa15.1■□□□□ 0.01
SAFB2-201ENST00000252542 FGFR3P22607 806 aa15.1■□□□□ 0.01
SAFB2-201ENST00000252542 CORO1AP31146 461 aaKnown RBP15.1■□□□□ 0.01
SAFB2-201ENST00000252542 CDK18Q07002 472 aa15.1■□□□□ 0.01
SAFB2-201ENST00000252542 NOGQ13253 232 aa15.1■□□□□ 0.01
SAFB2-201ENST00000252542 MAP3K21Q5TCX8 1036 aa15.1■□□□□ 0.01
SAFB2-201ENST00000252542 RNF219Q5W0B1 726 aaPredicted RBP15.1■□□□□ 0.01
SAFB2-201ENST00000252542 GLT6D1Q7Z4J2 308 aa15.1■□□□□ 0.01
SAFB2-201ENST00000252542 SEPT8Q92599 483 aa15.1■□□□□ 0.01
SAFB2-201ENST00000252542 POLR1EQ9GZS1 481 aaKnown RBP15.1■□□□□ 0.01
SAFB2-201ENST00000252542 SMG9Q9H0W8 520 aaKnown RBP15.1■□□□□ 0.01
SAFB2-201ENST00000252542 SEMA6AQ9H2E6 1030 aa15.1■□□□□ 0.01
SAFB2-201ENST00000252542 OCEL1Q9H607 264 aa15.1■□□□□ 0.01
SAFB2-201ENST00000252542 RPL26L1Q9UNX3 145 aaKnown RBP15.1■□□□□ 0.01
SAFB2-201ENST00000252542 VWA7Q9Y334 891 aa15.1■□□□□ 0.01
SAFB2-201ENST00000252542 PCDHB9Q9Y5E1 797 aa15.1■□□□□ 0.01
SAFB2-201ENST00000252542 C2orf78A6NCI8 922 aa15.1■□□□□ 0.01
SAFB2-201ENST00000252542 HDAC3O15379 428 aa15.1■□□□□ 0.01
SAFB2-201ENST00000252542 OR6B1O95007 311 aa15.1■□□□□ 0.01
SAFB2-201ENST00000252542 PIK3R1P27986 724 aa15.1■□□□□ 0.01
SAFB2-201ENST00000252542 HCAR3P49019 387 aa15.1■□□□□ 0.01
SAFB2-201ENST00000252542 FOXD4Q12950 439 aaPredicted RBP15.1■□□□□ 0.01
SAFB2-201ENST00000252542 DSC3Q14574 896 aa15.1■□□□□ 0.01
SAFB2-201ENST00000252542 AGAP9Q5VTM2 703 aa15.1■□□□□ 0.01
SAFB2-201ENST00000252542 DENND5AQ6IQ26 1287 aa15.1■□□□□ 0.01
SAFB2-201ENST00000252542 LIMS2Q7Z4I7 341 aa15.1■□□□□ 0.01
SAFB2-201ENST00000252542 ABTB1Q969K4 478 aaPredicted RBP15.1■□□□□ 0.01
SAFB2-201ENST00000252542 HIC2Q96JB3 615 aa15.1■□□□□ 0.01
SAFB2-201ENST00000252542 KCNA7Q96RP8 456 aa15.1■□□□□ 0.01
SAFB2-201ENST00000252542 CCDC106Q9BWC9 280 aa15.1■□□□□ 0.01
SAFB2-201ENST00000252542 TLR9Q9NR96 1032 aa15.1■□□□□ 0.01
SAFB2-201ENST00000252542 DDX18Q9NVP1 670 aaKnown RBP15.1■□□□□ 0.01
SAFB2-201ENST00000252542 TLR6Q9Y2C9 796 aa15.1■□□□□ 0.01
SAFB2-201ENST00000252542 FCF1Q9Y324 198 aaKnown RBP15.1■□□□□ 0.01
SAFB2-201ENST00000252542 PCDHB12Q9Y5F1 795 aa15.1■□□□□ 0.01
SAFB2-201ENST00000252542 CCDC162PA2VCL2 907 aa15.1■□□□□ 0.01
SAFB2-201ENST00000252542 ZNF487B1APH4 448 aa15.1■□□□□ 0.01
SAFB2-201ENST00000252542 UBXN8O00124 270 aa15.1■□□□□ 0.01
SAFB2-201ENST00000252542 PFDN1O60925 122 aa15.1■□□□□ 0.01
SAFB2-201ENST00000252542 KATNA1O75449 491 aa15.1■□□□□ 0.01
SAFB2-201ENST00000252542 RAG1P15918 1043 aa15.1■□□□□ 0.01
SAFB2-201ENST00000252542 CES1P23141 567 aa15.1■□□□□ 0.01
SAFB2-201ENST00000252542 ARNTP27540 789 aa15.1■□□□□ 0.01
SAFB2-201ENST00000252542 RGRP47804 291 aa15.1■□□□□ 0.01
SAFB2-201ENST00000252542 ALDH1A3P47895 512 aa15.1■□□□□ 0.01
SAFB2-201ENST00000252542 CYLC2Q14093 348 aaPredicted RBP15.1■□□□□ 0.01
SAFB2-201ENST00000252542 TRMT5Q32P41 509 aaKnown RBP15.1■□□□□ 0.01
SAFB2-201ENST00000252542 LIN52Q52LA3 116 aa15.1■□□□□ 0.01
SAFB2-201ENST00000252542 TIFABQ6ZNK6 161 aa15.1■□□□□ 0.01
SAFB2-201ENST00000252542 TMEM169Q96HH4 297 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms