RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 RNF180Q86T96 592 aa19.62■□□□□ 0.73
CDC42EP1-201ENST00000249014 CEP70Q8NHQ1 597 aa19.62■□□□□ 0.73
CDC42EP1-201ENST00000249014 GABPB2Q8TAK5 448 aaPredicted RBP19.62■□□□□ 0.73
CDC42EP1-201ENST00000249014 SPPL2BQ8TCT7 592 aa19.62■□□□□ 0.73
CDC42EP1-201ENST00000249014 TBATAQ96M53 351 aa19.62■□□□□ 0.73
CDC42EP1-201ENST00000249014 CCSER2Q9H7U1 834 aa19.62■□□□□ 0.73
CDC42EP1-201ENST00000249014 HCSTQ9UBK5 93 aa19.62■□□□□ 0.73
CDC42EP1-201ENST00000249014 CRYL1Q9Y2S2 319 aa19.62■□□□□ 0.73
CDC42EP1-201ENST00000249014 STX16-NPEPL1H3BU86 382 aa19.61■□□□□ 0.73
CDC42EP1-201ENST00000249014 CFLARO15519 480 aa19.61■□□□□ 0.73
CDC42EP1-201ENST00000249014 SNUPNO95149 360 aaKnown RBP19.61■□□□□ 0.73
CDC42EP1-201ENST00000249014 RBP1P09455 135 aa19.61■□□□□ 0.73
CDC42EP1-201ENST00000249014 XRCC1P18887 633 aaPredicted RBP19.61■□□□□ 0.73
CDC42EP1-201ENST00000249014 CEACAM7Q14002 265 aa19.61■□□□□ 0.73
CDC42EP1-201ENST00000249014 MGAT5BQ3V5L5 792 aa19.61■□□□□ 0.73
CDC42EP1-201ENST00000249014 PARP15Q460N3 678 aa19.61■□□□□ 0.73
CDC42EP1-201ENST00000249014 CUZD1Q86UP6 607 aa19.61■□□□□ 0.73
CDC42EP1-201ENST00000249014 PGAM4Q8N0Y7 254 aa19.61■□□□□ 0.73
CDC42EP1-201ENST00000249014 PHC3Q8NDX5 983 aa19.61■□□□□ 0.73
CDC42EP1-201ENST00000249014 USP13Q92995 863 aaPredicted RBP19.61■□□□□ 0.73
CDC42EP1-201ENST00000249014 CCDC126Q96EE4 140 aa19.61■□□□□ 0.73
CDC42EP1-201ENST00000249014 NR1H4Q96RI1 486 aaPredicted RBP19.61■□□□□ 0.73
CDC42EP1-201ENST00000249014 SERPINI1Q99574 410 aa19.61■□□□□ 0.73
CDC42EP1-201ENST00000249014 SEPT5Q99719 369 aaPredicted RBP19.61■□□□□ 0.73
CDC42EP1-201ENST00000249014 NPAS2Q99743 824 aa19.61■□□□□ 0.73
CDC42EP1-201ENST00000249014 PPP1R12CQ9BZL4 782 aa19.61■□□□□ 0.73
CDC42EP1-201ENST00000249014 WDR41Q9HAD4 459 aa19.61■□□□□ 0.73
CDC42EP1-201ENST00000249014 OLA1Q9NTK5 396 aaKnown RBP19.61■□□□□ 0.73
CDC42EP1-201ENST00000249014 ZDHHC7Q9NXF8 308 aa19.61■□□□□ 0.73
CDC42EP1-201ENST00000249014 VPS28Q9UK41 221 aa19.61■□□□□ 0.73
CDC42EP1-201ENST00000249014 ARL5AQ9Y689 179 aa19.61■□□□□ 0.73
CDC42EP1-201ENST00000249014 MTMR11A4FU01 709 aa19.61■□□□□ 0.73
CDC42EP1-201ENST00000249014 AQP4P55087 323 aa19.61■□□□□ 0.73
CDC42EP1-201ENST00000249014 RNF19BQ6ZMZ0 732 aa19.61■□□□□ 0.73
CDC42EP1-201ENST00000249014 RNF148Q8N7C7 305 aa19.61■□□□□ 0.73
CDC42EP1-201ENST00000249014 HMGCLL1Q8TB92 370 aa19.61■□□□□ 0.73
CDC42EP1-201ENST00000249014 DDX50Q9BQ39 737 aaKnown RBP19.61■□□□□ 0.73
CDC42EP1-201ENST00000249014 KLHL4Q9C0H6 718 aa19.61■□□□□ 0.73
CDC42EP1-201ENST00000249014 ALG9Q9H6U8 611 aa19.61■□□□□ 0.73
CDC42EP1-201ENST00000249014 CHD5Q8TDI0 1954 aa19.61■□□□□ 0.73
CDC42EP1-201ENST00000249014 UBFD1O14562 309 aaKnown RBP19.6■□□□□ 0.73
CDC42EP1-201ENST00000249014 RTN3O95197 1032 aaPredicted RBP19.6■□□□□ 0.73
CDC42EP1-201ENST00000249014 PBX3P40426 434 aa19.6■□□□□ 0.73
CDC42EP1-201ENST00000249014 GATMP50440 423 aa19.6■□□□□ 0.73
CDC42EP1-201ENST00000249014 SATB1Q01826 763 aa19.6■□□□□ 0.73
CDC42EP1-201ENST00000249014 GALNT3Q14435 633 aa19.6■□□□□ 0.73
CDC42EP1-201ENST00000249014 TRIP10Q15642 601 aa19.6■□□□□ 0.73
CDC42EP1-201ENST00000249014 PPP1R3AQ16821 1122 aa19.6■□□□□ 0.73
CDC42EP1-201ENST00000249014 GK5Q6ZS86 529 aa19.6■□□□□ 0.73
CDC42EP1-201ENST00000249014 CHSY3Q70JA7 882 aa19.6■□□□□ 0.73
CDC42EP1-201ENST00000249014 ISCA2Q86U28 154 aa19.6■□□□□ 0.73
CDC42EP1-201ENST00000249014 BLOC1S5Q8TDH9 187 aa19.6■□□□□ 0.73
CDC42EP1-201ENST00000249014 PPP2R3CQ969Q6 453 aa19.6■□□□□ 0.73
CDC42EP1-201ENST00000249014 GSTO2Q9H4Y5 243 aa19.6■□□□□ 0.73
CDC42EP1-201ENST00000249014 EFCAB1Q9HAE3 211 aa19.6■□□□□ 0.73
CDC42EP1-201ENST00000249014 MEAF6Q9HAF1 191 aa19.6■□□□□ 0.73
CDC42EP1-201ENST00000249014 ACTL7AQ9Y615 435 aa19.6■□□□□ 0.73
CDC42EP1-201ENST00000249014 OR6C75A6NL08 312 aa19.6■□□□□ 0.73
CDC42EP1-201ENST00000249014 CASQ2O14958 399 aaPredicted RBP19.6■□□□□ 0.73
CDC42EP1-201ENST00000249014 PRAMEF11O60813 436 aa19.6■□□□□ 0.73
CDC42EP1-201ENST00000249014 LYNP07948 512 aa19.6■□□□□ 0.73
CDC42EP1-201ENST00000249014 KCNQ1P51787 676 aa19.6■□□□□ 0.73
CDC42EP1-201ENST00000249014 MS4A2Q01362 244 aa19.6■□□□□ 0.73
CDC42EP1-201ENST00000249014 ACVR1Q04771 509 aa19.6■□□□□ 0.73
CDC42EP1-201ENST00000249014 SEMA3AQ14563 771 aa19.6■□□□□ 0.73
CDC42EP1-201ENST00000249014 ZNF549Q6P9A3 640 aa19.6■□□□□ 0.73
CDC42EP1-201ENST00000249014 CFAP52Q8N1V2 620 aa19.6■□□□□ 0.73
CDC42EP1-201ENST00000249014 IFT43Q96FT9 208 aa19.6■□□□□ 0.73
CDC42EP1-201ENST00000249014 DNAJC1Q96KC8 554 aaKnown RBP19.6■□□□□ 0.73
CDC42EP1-201ENST00000249014 GLT1D1Q96MS3 346 aa19.6■□□□□ 0.73
CDC42EP1-201ENST00000249014 POLR1EQ9GZS1 481 aaKnown RBP19.6■□□□□ 0.73
CDC42EP1-201ENST00000249014 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.6■□□□□ 0.736e-7■■■□□ 17.3
CDC42EP1-201ENST00000249014 MARCH5Q9NX47 278 aa19.6■□□□□ 0.73
CDC42EP1-201ENST00000249014 A0A0D9SEW6 157 aa19.59■□□□□ 0.73
CDC42EP1-201ENST00000249014 RNASEH1O60930 286 aaKnown RBP19.59■□□□□ 0.73
CDC42EP1-201ENST00000249014 GOT2P00505 430 aaKnown RBP19.59■□□□□ 0.73
CDC42EP1-201ENST00000249014 PIRTP0C851 137 aa19.59■□□□□ 0.73
CDC42EP1-201ENST00000249014 HSPA1AP0DMV8 641 aaKnown RBP19.59■□□□□ 0.73
CDC42EP1-201ENST00000249014 HSPA1BP0DMV9 641 aaKnown RBP19.59■□□□□ 0.73
CDC42EP1-201ENST00000249014 TIAL1Q01085 375 aaKnown RBP eCLIP19.59■□□□□ 0.73
CDC42EP1-201ENST00000249014 ART3Q13508 389 aa19.59■□□□□ 0.73
CDC42EP1-201ENST00000249014 RNF220Q5VTB9 566 aa19.59■□□□□ 0.73
CDC42EP1-201ENST00000249014 SDCCAG8Q86SQ7 713 aaPredicted RBP19.59■□□□□ 0.73
CDC42EP1-201ENST00000249014 PTERQ96BW5 349 aa19.59■□□□□ 0.73
CDC42EP1-201ENST00000249014 YIPF3Q9GZM5 350 aa19.59■□□□□ 0.73
CDC42EP1-201ENST00000249014 PDFQ9HBH1 243 aa19.59■□□□□ 0.73
CDC42EP1-201ENST00000249014 EML4Q9HC35 981 aaKnown RBP19.59■□□□□ 0.73
CDC42EP1-201ENST00000249014 TMEM161AQ9NX61 479 aa19.59■□□□□ 0.73
CDC42EP1-201ENST00000249014 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.59■□□□□ 0.73
CDC42EP1-201ENST00000249014 SLC4A1P02730 911 aa19.59■□□□□ 0.73
CDC42EP1-201ENST00000249014 ZCCHC18P0CG32 403 aa19.59■□□□□ 0.73
CDC42EP1-201ENST00000249014 TSPAN8P19075 237 aa19.59■□□□□ 0.73
CDC42EP1-201ENST00000249014 FGFR3P22607 806 aa19.59■□□□□ 0.73
CDC42EP1-201ENST00000249014 YBEYP58557 167 aaPredicted RBP19.59■□□□□ 0.73
CDC42EP1-201ENST00000249014 RING1Q06587 406 aa19.59■□□□□ 0.73
CDC42EP1-201ENST00000249014 FLOT2Q14254 428 aa19.59■□□□□ 0.73
CDC42EP1-201ENST00000249014 OR13C4Q8NGS5 318 aa19.59■□□□□ 0.73
CDC42EP1-201ENST00000249014 GIPC2Q8TF65 315 aa19.59■□□□□ 0.73
CDC42EP1-201ENST00000249014 TMA16Q96EY4 203 aaKnown RBP19.59■□□□□ 0.73
CDC42EP1-201ENST00000249014 TUBGCP5Q96RT8 1024 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms