RNA–Protein interactions for RNA: ENST00000246117.8

NCLN-201, Transcript of nicalin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCLN, Length 4,005 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-201ENST00000246117 TRAPPC9Q96Q05 1148 aa13.76□□□□□ -0.21
NCLN-201ENST00000246117 WDR83Q9BRX9 315 aaKnown RBP13.76□□□□□ -0.21
NCLN-201ENST00000246117 SIRPGQ9P1W8 387 aa13.76□□□□□ -0.21
NCLN-201ENST00000246117 LNPEPQ9UIQ6 1025 aa13.76□□□□□ -0.21
NCLN-201ENST00000246117 ARL5AQ9Y689 179 aa13.76□□□□□ -0.21
NCLN-201ENST00000246117 SLX4Q8IY92 1834 aa13.76□□□□□ -0.21
NCLN-201ENST00000246117 ARID1BQ8NFD5 2236 aaPredicted RBP13.76□□□□□ -0.21
NCLN-201ENST00000246117 SMIM35A0A1B0GVV1 85 aa13.76□□□□□ -0.21
NCLN-201ENST00000246117 ZSCAN9O15535 394 aaPredicted RBP13.76□□□□□ -0.21
NCLN-201ENST00000246117 NRP2O60462 931 aa13.76□□□□□ -0.21
NCLN-201ENST00000246117 GSNP06396 782 aa13.76□□□□□ -0.21
NCLN-201ENST00000246117 UGT1A6P19224 532 aa13.76□□□□□ -0.21
NCLN-201ENST00000246117 OCA2Q04671 838 aa13.76□□□□□ -0.21
NCLN-201ENST00000246117 CPSF6Q16630 551 aaKnown RBP eCLIP13.76□□□□□ -0.21
NCLN-201ENST00000246117 C11orf96Q7Z7L8 435 aa13.76□□□□□ -0.21
NCLN-201ENST00000246117 RNF168Q8IYW5 571 aaPredicted RBP13.76□□□□□ -0.21
NCLN-201ENST00000246117 TMEM86AQ8N2M4 240 aa13.76□□□□□ -0.21
NCLN-201ENST00000246117 RPL10LQ96L21 214 aaKnown RBP13.76□□□□□ -0.21
NCLN-201ENST00000246117 ZYG11BQ9C0D3 744 aa13.76□□□□□ -0.21
NCLN-201ENST00000246117 SPAG4Q9NPE6 437 aa13.76□□□□□ -0.21
NCLN-201ENST00000246117 SORCS3Q9UPU3 1222 aa13.76□□□□□ -0.21
NCLN-201ENST00000246117 F8W810 466 aa13.76□□□□□ -0.21
NCLN-201ENST00000246117 SEC22BO75396 215 aa13.76□□□□□ -0.21
NCLN-201ENST00000246117 IPO13O94829 963 aaKnown RBP13.76□□□□□ -0.21
NCLN-201ENST00000246117 CRTAMO95727 393 aa13.76□□□□□ -0.21
NCLN-201ENST00000246117 HOXA11P31270 313 aaPredicted RBP13.76□□□□□ -0.21
NCLN-201ENST00000246117 FLT3LGP49771 235 aa13.76□□□□□ -0.21
NCLN-201ENST00000246117 RGS4P49798 205 aa13.76□□□□□ -0.21
NCLN-201ENST00000246117 LRRC73Q5JTD7 316 aa13.76□□□□□ -0.21
NCLN-201ENST00000246117 ARRDC4Q8NCT1 418 aa13.76□□□□□ -0.21
NCLN-201ENST00000246117 SLC45A3Q96JT2 553 aa13.76□□□□□ -0.21
NCLN-201ENST00000246117 ANKRD27Q96NW4 1050 aa13.76□□□□□ -0.21
NCLN-201ENST00000246117 PRKD2Q9BZL6 878 aa13.76□□□□□ -0.21
NCLN-201ENST00000246117 TLR8Q9NR97 1041 aaKnown RBP13.76□□□□□ -0.21
NCLN-201ENST00000246117 EVPLQ92817 2033 aa13.76□□□□□ -0.21
NCLN-201ENST00000246117 LRRC14BA6NHZ5 514 aa13.75□□□□□ -0.21
NCLN-201ENST00000246117 LINGO3P0C6S8 592 aa13.75□□□□□ -0.21
NCLN-201ENST00000246117 MYL4P12829 197 aa13.75□□□□□ -0.21
NCLN-201ENST00000246117 INCA1Q0VD86 236 aa13.75□□□□□ -0.21
NCLN-201ENST00000246117 GPSM1Q86YR5 675 aa13.75□□□□□ -0.21
NCLN-201ENST00000246117 RELL1Q8IUW5 271 aa13.75□□□□□ -0.21
NCLN-201ENST00000246117 SLC22A9Q8IVM8 553 aa13.75□□□□□ -0.21
NCLN-201ENST00000246117 KCNA7Q96RP8 456 aa13.75□□□□□ -0.21
NCLN-201ENST00000246117 TRIM54Q9BYV2 358 aa13.75□□□□□ -0.21
NCLN-201ENST00000246117 SYTL2Q9HCH5 934 aa13.75□□□□□ -0.21
NCLN-201ENST00000246117 CNTN6Q9UQ52 1028 aa13.75□□□□□ -0.21
NCLN-201ENST00000246117 MYRFQ9Y2G1 1151 aa13.75□□□□□ -0.21
NCLN-201ENST00000246117 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.75□□□□□ -0.21
NCLN-201ENST00000246117 CD3EAPO15446 510 aaKnown RBP13.75□□□□□ -0.21
NCLN-201ENST00000246117 CREB5Q02930 508 aa13.75□□□□□ -0.21
NCLN-201ENST00000246117 CDK18Q07002 472 aa13.75□□□□□ -0.21
NCLN-201ENST00000246117 BFSP2Q13515 415 aa13.75□□□□□ -0.21
NCLN-201ENST00000246117 NRG4Q8WWG1 115 aa13.75□□□□□ -0.21
NCLN-201ENST00000246117 UBA2Q9UBT2 640 aaPredicted RBP13.75□□□□□ -0.21
NCLN-201ENST00000246117 ADAM28Q9UKQ2 775 aa13.75□□□□□ -0.21
NCLN-201ENST00000246117 NPEPPSL1A6NEC2 478 aa13.75□□□□□ -0.21
NCLN-201ENST00000246117 TRIM38O00635 465 aa13.75□□□□□ -0.21
NCLN-201ENST00000246117 CNTN5O94779 1100 aa13.75□□□□□ -0.21
NCLN-201ENST00000246117 PFKMP08237 780 aa13.75□□□□□ -0.21
NCLN-201ENST00000246117 MTHFD1P11586 935 aaKnown RBP13.75□□□□□ -0.21
NCLN-201ENST00000246117 ETV4P43268 484 aa13.75□□□□□ -0.21
NCLN-201ENST00000246117 CCNG1P51959 295 aa13.75□□□□□ -0.21
NCLN-201ENST00000246117 ARMC12Q5T9G4 340 aa13.75□□□□□ -0.21
NCLN-201ENST00000246117 GPR107Q5VW38 600 aa13.75□□□□□ -0.21
NCLN-201ENST00000246117 IL23RQ5VWK5 629 aa13.75□□□□□ -0.21
NCLN-201ENST00000246117 RNF180Q86T96 592 aa13.75□□□□□ -0.21
NCLN-201ENST00000246117 LZTR1Q8N653 840 aa13.75□□□□□ -0.21
NCLN-201ENST00000246117 OR10Q1Q8NGQ4 319 aa13.75□□□□□ -0.21
NCLN-201ENST00000246117 GANCQ8TET4 914 aa13.75□□□□□ -0.21
NCLN-201ENST00000246117 GTF3C2Q8WUA4 911 aaPredicted RBP13.75□□□□□ -0.21
NCLN-201ENST00000246117 FAR2Q96K12 515 aa13.75□□□□□ -0.21
NCLN-201ENST00000246117 RTKNQ9BST9 563 aa13.75□□□□□ -0.21
NCLN-201ENST00000246117 STARD7Q9NQZ5 370 aa13.75□□□□□ -0.21
NCLN-201ENST00000246117 KANSL3Q9P2N6 904 aa13.75□□□□□ -0.21
NCLN-201ENST00000246117 ZNF229Q9UJW7 825 aa13.75□□□□□ -0.21
NCLN-201ENST00000246117 BTAF1O14981 1849 aa13.75□□□□□ -0.21
NCLN-201ENST00000246117 MAP3K13O43283 966 aa13.74□□□□□ -0.21
NCLN-201ENST00000246117 LBPP18428 481 aa13.74□□□□□ -0.21
NCLN-201ENST00000246117 HALP42357 657 aa13.74□□□□□ -0.21
NCLN-201ENST00000246117 YAP1P46937 504 aaKnown RBP13.74□□□□□ -0.21
NCLN-201ENST00000246117 GALK1P51570 392 aa13.74□□□□□ -0.21
NCLN-201ENST00000246117 RPS24P62847 133 aaKnown RBP13.74□□□□□ -0.21
NCLN-201ENST00000246117 ROR2Q01974 943 aaKnown RBP13.74□□□□□ -0.21
NCLN-201ENST00000246117 TSNQ15631 228 aaKnown RBP13.74□□□□□ -0.21
NCLN-201ENST00000246117 FAM151BQ6UXP7 276 aa13.74□□□□□ -0.21
NCLN-201ENST00000246117 GCNT7Q6ZNI0 430 aa13.74□□□□□ -0.21
NCLN-201ENST00000246117 ZNF598Q86UK7 904 aaKnown RBP13.74□□□□□ -0.21
NCLN-201ENST00000246117 OTULINQ96BN8 352 aa13.74□□□□□ -0.21
NCLN-201ENST00000246117 PTCD3Q96EY7 689 aaKnown RBP13.74□□□□□ -0.21
NCLN-201ENST00000246117 GPR21Q99679 349 aa13.74□□□□□ -0.21
NCLN-201ENST00000246117 ALG2Q9H553 416 aa13.74□□□□□ -0.21
NCLN-201ENST00000246117 COQ10BQ9H8M1 238 aa13.74□□□□□ -0.21
NCLN-201ENST00000246117 POLR1BQ9H9Y6 1135 aa13.74□□□□□ -0.21
NCLN-201ENST00000246117 ANKRD6Q9Y2G4 727 aa13.74□□□□□ -0.21
NCLN-201ENST00000246117 USP54Q70EL1 1684 aa13.74□□□□□ -0.21
NCLN-201ENST00000246117 AZIN1O14977 448 aa13.74□□□□□ -0.21
NCLN-201ENST00000246117 RNASEH1O60930 286 aaKnown RBP13.74□□□□□ -0.21
NCLN-201ENST00000246117 LDLRP01130 860 aa13.74□□□□□ -0.21
NCLN-201ENST00000246117 POU1F1P28069 291 aa13.74□□□□□ -0.21
NCLN-201ENST00000246117 IL5RAQ01344 420 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms