RNA–Protein interactions for RNA: ENST00000239878.8

UFM1-201, Transcript of ubiquitin fold modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFM1, Length 3,138 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFM1-201ENST00000239878 GFRA2O00451 464 aa3.69□□□□□ -1.82
UFM1-201ENST00000239878 PODXLO00592 558 aa3.69□□□□□ -1.82
UFM1-201ENST00000239878 CLOCKO15516 846 aa3.69□□□□□ -1.82
UFM1-201ENST00000239878 CALUO43852 315 aaPredicted RBP3.69□□□□□ -1.82
UFM1-201ENST00000239878 DLX3O60479 287 aa3.69□□□□□ -1.82
UFM1-201ENST00000239878 ZC3H11AO75152 810 aaKnown RBP eCLIP3.69□□□□□ -1.82
UFM1-201ENST00000239878 CBX6O95503 412 aa3.69□□□□□ -1.82
UFM1-201ENST00000239878 IL33O95760 270 aa3.69□□□□□ -1.82
UFM1-201ENST00000239878 ASS1P00966 412 aaKnown RBP3.69□□□□□ -1.82
UFM1-201ENST00000239878 GSTM1P09488 218 aa3.69□□□□□ -1.82
UFM1-201ENST00000239878 PIM1P11309 404 aaPredicted RBP3.69□□□□□ -1.82
UFM1-201ENST00000239878 ACO1P21399 889 aaKnown RBP3.69□□□□□ -1.82
UFM1-201ENST00000239878 WARSP23381 471 aaKnown RBP3.69□□□□□ -1.82
UFM1-201ENST00000239878 TNFSF4P23510 183 aa3.69□□□□□ -1.82
UFM1-201ENST00000239878 PON1P27169 355 aa3.69□□□□□ -1.82
UFM1-201ENST00000239878 LTBRP36941 435 aa3.69□□□□□ -1.82
UFM1-201ENST00000239878 HADHAP40939 763 aa3.69□□□□□ -1.82
UFM1-201ENST00000239878 SLC1A1P43005 524 aa3.69□□□□□ -1.82
UFM1-201ENST00000239878 CLCNKBP51801 687 aa3.69□□□□□ -1.82
UFM1-201ENST00000239878 ZNF143P52747 638 aaPredicted RBP3.69□□□□□ -1.82
UFM1-201ENST00000239878 HK2P52789 917 aa3.69□□□□□ -1.82
UFM1-201ENST00000239878 VCPP55072 806 aaKnown RBP3.69□□□□□ -1.82
UFM1-201ENST00000239878 ERVFC1P60507 584 aa3.69□□□□□ -1.82
UFM1-201ENST00000239878 POLR2GP62487 172 aaKnown RBP eCLIP3.69□□□□□ -1.82
UFM1-201ENST00000239878 IFI35P80217 286 aaPredicted RBP3.69□□□□□ -1.82
UFM1-201ENST00000239878 CHRNEQ04844 493 aa3.69□□□□□ -1.82
UFM1-201ENST00000239878 BFSP1Q12934 665 aa3.69□□□□□ -1.82
UFM1-201ENST00000239878 CDC16Q13042 620 aa3.69□□□□□ -1.82
UFM1-201ENST00000239878 PAK1Q13153 545 aa3.69□□□□□ -1.82
UFM1-201ENST00000239878 PXDC1Q5TGL8 231 aa3.69□□□□□ -1.82
UFM1-201ENST00000239878 PIK3R6Q5UE93 754 aa3.69□□□□□ -1.82
UFM1-201ENST00000239878 CDCP2Q5VXM1 449 aa3.69□□□□□ -1.82
UFM1-201ENST00000239878 NANOGP8Q6NSW7 305 aa3.69□□□□□ -1.82
UFM1-201ENST00000239878 FAM171BQ6P995 826 aa3.69□□□□□ -1.82
UFM1-201ENST00000239878 TXNDC11Q6PKC3 985 aa3.69□□□□□ -1.82
UFM1-201ENST00000239878 CPNE9Q8IYJ1 553 aa3.69□□□□□ -1.82
UFM1-201ENST00000239878 GALNT4Q8N4A0 578 aa3.69□□□□□ -1.82
UFM1-201ENST00000239878 TOP6BLQ8N6T0 577 aa3.69□□□□□ -1.82
UFM1-201ENST00000239878 BBOF1Q8ND07 529 aa3.69□□□□□ -1.82
UFM1-201ENST00000239878 TTLQ8NG68 377 aa3.69□□□□□ -1.82
UFM1-201ENST00000239878 SLC22A8Q8TCC7 542 aa3.69□□□□□ -1.82
UFM1-201ENST00000239878 GRIN3AQ8TCU5 1115 aa3.69□□□□□ -1.82
UFM1-201ENST00000239878 CAPSLQ8WWF8 208 aa3.69□□□□□ -1.82
UFM1-201ENST00000239878 ATL1Q8WXF7 558 aa3.69□□□□□ -1.82
UFM1-201ENST00000239878 SEMA4DQ92854 862 aa3.69□□□□□ -1.82
UFM1-201ENST00000239878 HPS1Q92902 700 aa3.69□□□□□ -1.82
UFM1-201ENST00000239878 ZNF558Q96NG5 402 aa3.69□□□□□ -1.82
UFM1-201ENST00000239878 CDX2Q99626 313 aaPredicted RBP3.69□□□□□ -1.82
UFM1-201ENST00000239878 FAM213AQ9BRX8 229 aa3.69□□□□□ -1.82
UFM1-201ENST00000239878 SYT11Q9BT88 431 aa3.69□□□□□ -1.82
UFM1-201ENST00000239878 HEMGNQ9BXL5 484 aa3.69□□□□□ -1.82
UFM1-201ENST00000239878 GPR62Q9BZJ7 368 aa3.69□□□□□ -1.82
UFM1-201ENST00000239878 SDCBP2Q9H190 292 aa3.69□□□□□ -1.82
UFM1-201ENST00000239878 SLITRK6Q9H5Y7 841 aa3.69□□□□□ -1.82
UFM1-201ENST00000239878 CCDC134Q9H6E4 229 aa3.69□□□□□ -1.82
UFM1-201ENST00000239878 TXLNGQ9NUQ3 528 aa3.69□□□□□ -1.82
UFM1-201ENST00000239878 INTS9Q9NV88 658 aaKnown RBP3.69□□□□□ -1.82
UFM1-201ENST00000239878 RBAKQ9NYW8 714 aaPredicted RBP3.69□□□□□ -1.82
UFM1-201ENST00000239878 SPG21Q9NZD8 308 aa3.69□□□□□ -1.82
UFM1-201ENST00000239878 CLEC1BQ9P126 229 aa3.69□□□□□ -1.82
UFM1-201ENST00000239878 UVRAGQ9P2Y5 699 aa3.69□□□□□ -1.82
UFM1-201ENST00000239878 KCNN3Q9UGI6 736 aa3.69□□□□□ -1.82
UFM1-201ENST00000239878 NDOR1Q9UHB4 597 aa3.69□□□□□ -1.82
UFM1-201ENST00000239878 LIMA1Q9UHB6 759 aaKnown RBP3.69□□□□□ -1.82
UFM1-201ENST00000239878 ADAM28Q9UKQ2 775 aa3.69□□□□□ -1.82
UFM1-201ENST00000239878 VANGL2Q9ULK5 521 aa3.69□□□□□ -1.82
UFM1-201ENST00000239878 UBQLN1Q9UMX0 589 aaKnown RBP3.69□□□□□ -1.82
UFM1-201ENST00000239878 IFT52Q9Y366 437 aa3.69□□□□□ -1.82
UFM1-201ENST00000239878 BLACEA4D250 179 aa3.68□□□□□ -1.82
UFM1-201ENST00000239878 PI4K2BG5E9Z4 385 aa3.68□□□□□ -1.82
UFM1-201ENST00000239878 O00370 1275 aa3.68□□□□□ -1.82
UFM1-201ENST00000239878 H2AFYO75367 372 aaKnown RBP3.68□□□□□ -1.82
UFM1-201ENST00000239878 DCTN3O75935 186 aa3.68□□□□□ -1.82
UFM1-201ENST00000239878 RSL1D1O76021 490 aaKnown RBP3.68□□□□□ -1.82
UFM1-201ENST00000239878 KLHL2O95198 593 aa3.68□□□□□ -1.82
UFM1-201ENST00000239878 THP07101 528 aa3.68□□□□□ -1.82
UFM1-201ENST00000239878 POLR2CP19387 275 aaPredicted RBP3.68□□□□□ -1.82
UFM1-201ENST00000239878 HOXA9P31269 272 aa3.68□□□□□ -1.82
UFM1-201ENST00000239878 HNF1BP35680 557 aa3.68□□□□□ -1.82
UFM1-201ENST00000239878 ARL1P40616 181 aaPredicted RBP3.68□□□□□ -1.82
UFM1-201ENST00000239878 ACOT2P49753 483 aa3.68□□□□□ -1.82
UFM1-201ENST00000239878 MECP2P51608 486 aaKnown RBP3.68□□□□□ -1.82
UFM1-201ENST00000239878 EPHA5P54756 1037 aa3.68□□□□□ -1.82
UFM1-201ENST00000239878 LILRA4P59901 499 aa3.68□□□□□ -1.82
UFM1-201ENST00000239878 GABREP78334 506 aa3.68□□□□□ -1.82
UFM1-201ENST00000239878 FKBP3Q00688 224 aaKnown RBP3.68□□□□□ -1.82
UFM1-201ENST00000239878 CD83Q01151 205 aa3.68□□□□□ -1.82
UFM1-201ENST00000239878 TMEM132DQ14C87 1099 aa3.68□□□□□ -1.82
UFM1-201ENST00000239878 SURF1Q15526 300 aa3.68□□□□□ -1.82
UFM1-201ENST00000239878 CBWD6Q4V339 395 aa3.68□□□□□ -1.82
UFM1-201ENST00000239878 CBWD3Q5JTY5 395 aa3.68□□□□□ -1.82
UFM1-201ENST00000239878 RTP2Q5QGT7 225 aa3.68□□□□□ -1.82
UFM1-201ENST00000239878 CBWD5Q5RIA9 395 aa3.68□□□□□ -1.82
UFM1-201ENST00000239878 ACAD11Q709F0 780 aa3.68□□□□□ -1.82
UFM1-201ENST00000239878 INTS8Q75QN2 995 aaKnown RBP3.68□□□□□ -1.82
UFM1-201ENST00000239878 TRMT1LQ7Z2T5 733 aaKnown RBP3.68□□□□□ -1.82
UFM1-201ENST00000239878 BTLAQ7Z6A9 289 aa3.68□□□□□ -1.82
UFM1-201ENST00000239878 ADGRD2Q7Z7M1 963 aa3.68□□□□□ -1.82
UFM1-201ENST00000239878 HEATR4Q86WZ0 1026 aa3.68□□□□□ -1.82
UFM1-201ENST00000239878 ALLCQ8N6M5 410 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms