RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 UBOX5O94941 541 aa13.26□□□□□ -0.29
NEK9-201ENST00000238616 PGK1P00558 417 aa13.26□□□□□ -0.29
NEK9-201ENST00000238616 PRH1P02810 166 aa13.26□□□□□ -0.29
NEK9-201ENST00000238616 CCNB1P14635 433 aa13.26□□□□□ -0.29
NEK9-201ENST00000238616 MECP2P51608 486 aaKnown RBP13.26□□□□□ -0.29
NEK9-201ENST00000238616 AMZ1Q400G9 498 aa13.26□□□□□ -0.29
NEK9-201ENST00000238616 GAL3ST4Q96RP7 486 aa13.26□□□□□ -0.29
NEK9-201ENST00000238616 U3KQV3 271 aa13.26□□□□□ -0.29
NEK9-201ENST00000238616 LRRC7Q96NW7 1537 aa13.26□□□□□ -0.29
NEK9-201ENST00000238616 RPL38P63173 70 aaKnown RBP13.26□□□□□ -0.29
NEK9-201ENST00000238616 OR8D1Q8WZ84 308 aa13.26□□□□□ -0.29
NEK9-201ENST00000238616 ISCA1Q9BUE6 129 aa13.26□□□□□ -0.29
NEK9-201ENST00000238616 SSR3Q9UNL2 185 aa13.26□□□□□ -0.29
NEK9-201ENST00000238616 G3V2T6 193 aa13.26□□□□□ -0.29
NEK9-201ENST00000238616 CST1P01037 141 aa13.26□□□□□ -0.29
NEK9-201ENST00000238616 KLRK1P26718 216 aa13.26□□□□□ -0.29
NEK9-201ENST00000238616 SLC26A2P50443 739 aa13.26□□□□□ -0.29
NEK9-201ENST00000238616 PGM5Q15124 567 aa13.26□□□□□ -0.29
NEK9-201ENST00000238616 SDHAF4Q5VUM1 108 aa13.26□□□□□ -0.29
NEK9-201ENST00000238616 WSCD1Q658N2 575 aa13.26□□□□□ -0.29
NEK9-201ENST00000238616 SLC27A1Q6PCB7 646 aa13.26□□□□□ -0.29
NEK9-201ENST00000238616 RAD9BQ6WBX8 426 aa13.26□□□□□ -0.29
NEK9-201ENST00000238616 ZBTB46Q86UZ6 589 aa13.26□□□□□ -0.29
NEK9-201ENST00000238616 PCDH20Q8N6Y1 951 aaKnown RBP13.26□□□□□ -0.29
NEK9-201ENST00000238616 REPS2Q8NFH8 660 aa13.26□□□□□ -0.29
NEK9-201ENST00000238616 AP3S1Q92572 193 aa13.26□□□□□ -0.29
NEK9-201ENST00000238616 TOP1MTQ969P6 601 aa13.26□□□□□ -0.29
NEK9-201ENST00000238616 NAALADL1Q9UQQ1 740 aa13.26□□□□□ -0.29
NEK9-201ENST00000238616 CCDC162PA2VCL2 907 aa13.26□□□□□ -0.29
NEK9-201ENST00000238616 CLDN5O00501 218 aa13.26□□□□□ -0.29
NEK9-201ENST00000238616 HAT1O14929 419 aa13.26□□□□□ -0.29
NEK9-201ENST00000238616 RECQL5O94762 991 aaPredicted RBP13.26□□□□□ -0.29
NEK9-201ENST00000238616 TTPAP49638 278 aa13.26□□□□□ -0.29
NEK9-201ENST00000238616 TRMT5Q32P41 509 aaKnown RBP13.26□□□□□ -0.29
NEK9-201ENST00000238616 C12orf56Q8IXR9 622 aa13.26□□□□□ -0.29
NEK9-201ENST00000238616 PRSS58Q8IYP2 241 aa13.26□□□□□ -0.29
NEK9-201ENST00000238616 LRRN4Q8WUT4 740 aa13.26□□□□□ -0.29
NEK9-201ENST00000238616 IL22Q9GZX6 179 aa13.26□□□□□ -0.29
NEK9-201ENST00000238616 XPR1Q9UBH6 696 aa13.26□□□□□ -0.29
NEK9-201ENST00000238616 MRASO14807 208 aa13.25□□□□□ -0.29
NEK9-201ENST00000238616 EPHB6O15197 1021 aa13.25□□□□□ -0.29
NEK9-201ENST00000238616 UGT2B17O75795 530 aa13.25□□□□□ -0.29
NEK9-201ENST00000238616 CCNB2O95067 398 aa13.25□□□□□ -0.29
NEK9-201ENST00000238616 GJB6O95452 261 aa13.25□□□□□ -0.29
NEK9-201ENST00000238616 ERVK-24P63145 666 aa13.25□□□□□ -0.29
NEK9-201ENST00000238616 CPSF6Q16630 551 aaKnown RBP eCLIP13.25□□□□□ -0.29
NEK9-201ENST00000238616 COLEC12Q5KU26 742 aa13.25□□□□□ -0.29
NEK9-201ENST00000238616 SULT1C3Q6IMI6 304 aa13.25□□□□□ -0.29
NEK9-201ENST00000238616 ABRAXAS1Q6UWZ7 409 aa13.25□□□□□ -0.29
NEK9-201ENST00000238616 PLGRKTQ9HBL7 147 aa13.25□□□□□ -0.29
NEK9-201ENST00000238616 POPDC2Q9HBU9 364 aa13.25□□□□□ -0.29
NEK9-201ENST00000238616 GTF3C4Q9UKN8 822 aa13.25□□□□□ -0.29
NEK9-201ENST00000238616 TTC34A8MYJ7 566 aa13.25□□□□□ -0.29
NEK9-201ENST00000238616 MSX1P28360 303 aa13.25□□□□□ -0.29
NEK9-201ENST00000238616 TIMM50Q3ZCQ8 353 aa13.25□□□□□ -0.29
NEK9-201ENST00000238616 SNX32Q86XE0 403 aa13.25□□□□□ -0.29
NEK9-201ENST00000238616 COPS4Q9BT78 406 aa13.25□□□□□ -0.29
NEK9-201ENST00000238616 ZNF518BQ9C0D4 1074 aa13.25□□□□□ -0.29
NEK9-201ENST00000238616 DPEP2Q9H4A9 486 aa13.25□□□□□ -0.29
NEK9-201ENST00000238616 SAMD4AQ9UPU9 718 aaKnown RBP13.25□□□□□ -0.29
NEK9-201ENST00000238616 PCP4L1A6NKN8 68 aa13.25□□□□□ -0.29
NEK9-201ENST00000238616 E5RJQ4 531 aa13.25□□□□□ -0.29
NEK9-201ENST00000238616 PRKAR1AP10644 381 aa13.25□□□□□ -0.29
NEK9-201ENST00000238616 ME2P23368 584 aa13.25□□□□□ -0.29
NEK9-201ENST00000238616 VBP1P61758 197 aa13.25□□□□□ -0.29
NEK9-201ENST00000238616 SENP8Q96LD8 212 aa13.25□□□□□ -0.29
NEK9-201ENST00000238616 KCNF1Q9H3M0 494 aa13.25□□□□□ -0.29
NEK9-201ENST00000238616 PCDHGC5Q9Y5F6 944 aa13.25□□□□□ -0.29
NEK9-201ENST00000238616 TRPV2Q9Y5S1 764 aa13.25□□□□□ -0.29
NEK9-201ENST00000238616 ULK1O75385 1050 aa13.25□□□□□ -0.29
NEK9-201ENST00000238616 SEMA3DO95025 777 aa13.25□□□□□ -0.29
NEK9-201ENST00000238616 ZBTB11O95625 1053 aaPredicted RBP13.25□□□□□ -0.29
NEK9-201ENST00000238616 IFNGP01579 166 aa13.25□□□□□ -0.29
NEK9-201ENST00000238616 NPR3P17342 541 aa13.25□□□□□ -0.29
NEK9-201ENST00000238616 GRSF1Q12849 480 aaKnown RBP eCLIP13.25□□□□□ -0.293e-7■□□□□ 8
NEK9-201ENST00000238616 MEA1Q16626 185 aa13.25□□□□□ -0.29
NEK9-201ENST00000238616 PERM1Q5SV97 790 aa13.25□□□□□ -0.29
NEK9-201ENST00000238616 NPNTQ6UXI9 565 aa13.25□□□□□ -0.29
NEK9-201ENST00000238616 DNERQ8NFT8 737 aa13.25□□□□□ -0.29
NEK9-201ENST00000238616 OR52K2Q8NGK3 314 aa13.25□□□□□ -0.29
NEK9-201ENST00000238616 ABI3Q9P2A4 366 aa13.25□□□□□ -0.29
NEK9-201ENST00000238616 PEX11AO75192 247 aa13.25□□□□□ -0.29
NEK9-201ENST00000238616 KCNJ5P48544 419 aa13.25□□□□□ -0.29
NEK9-201ENST00000238616 MSLNQ13421 630 aaPredicted RBP13.25□□□□□ -0.29
NEK9-201ENST00000238616 EIF2S3LQ2VIR3 472 aaKnown RBP13.25□□□□□ -0.29
NEK9-201ENST00000238616 SBK1Q52WX2 424 aa13.25□□□□□ -0.29
NEK9-201ENST00000238616 ZC3H12AQ5D1E8 599 aaKnown RBP13.25□□□□□ -0.29
NEK9-201ENST00000238616 C9orf64Q5T6V5 341 aa13.25□□□□□ -0.29
NEK9-201ENST00000238616 P4HA3Q7Z4N8 544 aa13.25□□□□□ -0.29
NEK9-201ENST00000238616 SLC47A1Q96FL8 570 aa13.25□□□□□ -0.29
NEK9-201ENST00000238616 MED31Q9Y3C7 131 aa13.25□□□□□ -0.29
NEK9-201ENST00000238616 SAMHD1Q9Y3Z3 626 aaKnown RBP13.25□□□□□ -0.29
NEK9-201ENST00000238616 PPATQ06203 517 aa13.25□□□□□ -0.29
NEK9-201ENST00000238616 GIT2Q14161 759 aa13.25□□□□□ -0.29
NEK9-201ENST00000238616 DEFB106AQ8N104 65 aa13.25□□□□□ -0.29
NEK9-201ENST00000238616 CADM2Q8N3J6 435 aa13.25□□□□□ -0.29
NEK9-201ENST00000238616 OR52K1Q8NGK4 314 aa13.25□□□□□ -0.29
NEK9-201ENST00000238616 OR52E6Q96RD3 313 aa13.25□□□□□ -0.29
NEK9-201ENST00000238616 TDRD1Q9BXT4 1180 aaKnown RBP13.25□□□□□ -0.29
NEK9-201ENST00000238616 HEATR1Q9H583 2144 aaKnown RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms