RNA–Protein interactions for RNA: ENST00000234256.3

SLC1A4-201, Transcript of solute carrier family 1 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC1A4, Length 4,561 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A4-201ENST00000234256 DGKAP23743 735 aa17.2■□□□□ 0.34
SLC1A4-201ENST00000234256 PTPN9P43378 593 aa17.2■□□□□ 0.34
SLC1A4-201ENST00000234256 SYPL2Q5VXT5 272 aa17.2■□□□□ 0.34
SLC1A4-201ENST00000234256 FAM151BQ6UXP7 276 aa17.2■□□□□ 0.34
SLC1A4-201ENST00000234256 ARHGAP22Q7Z5H3 698 aa17.2■□□□□ 0.34
SLC1A4-201ENST00000234256 CMASQ8NFW8 434 aaPredicted RBP17.2■□□□□ 0.34
SLC1A4-201ENST00000234256 FBXL18Q96ME1 805 aa17.2■□□□□ 0.34
SLC1A4-201ENST00000234256 CDK5RAP1Q96SZ6 601 aaKnown RBP17.2■□□□□ 0.34
SLC1A4-201ENST00000234256 AGO1Q9UL18 857 aaKnown RBP17.2■□□□□ 0.34
SLC1A4-201ENST00000234256 PADI3Q9ULW8 664 aa17.2■□□□□ 0.34
SLC1A4-201ENST00000234256 PSMD13Q9UNM6 376 aa17.2■□□□□ 0.34
SLC1A4-201ENST00000234256 PPEF2O14830 753 aa17.2■□□□□ 0.34
SLC1A4-201ENST00000234256 CYP7B1O75881 506 aa17.2■□□□□ 0.34
SLC1A4-201ENST00000234256 TTPAP49638 278 aa17.2■□□□□ 0.34
SLC1A4-201ENST00000234256 C21orf59P57076 290 aa17.2■□□□□ 0.34
SLC1A4-201ENST00000234256 CCDC15Q0P6D6 951 aa17.2■□□□□ 0.34
SLC1A4-201ENST00000234256 MRPL28Q13084 256 aaKnown RBP17.2■□□□□ 0.34
SLC1A4-201ENST00000234256 SOWAHAQ2M3V2 549 aa17.2■□□□□ 0.34
SLC1A4-201ENST00000234256 TMEM198Q66K66 360 aa17.2■□□□□ 0.34
SLC1A4-201ENST00000234256 DCLRE1AQ6PJP8 1040 aa17.2■□□□□ 0.34
SLC1A4-201ENST00000234256 PLEKHM3Q6ZWE6 761 aa17.2■□□□□ 0.34
SLC1A4-201ENST00000234256 UTS2BQ765I0 119 aa17.2■□□□□ 0.34
SLC1A4-201ENST00000234256 STN1Q9H668 368 aaKnown RBP17.2■□□□□ 0.34
SLC1A4-201ENST00000234256 ZC4H2Q9NQZ6 224 aa17.2■□□□□ 0.34
SLC1A4-201ENST00000234256 CHD2O14647 1828 aaKnown RBP17.2■□□□□ 0.34
SLC1A4-201ENST00000234256 RP1L1Q8IWN7 2480 aaPredicted RBP17.2■□□□□ 0.34
SLC1A4-201ENST00000234256 A0A0J9YYE9 177 aa17.2■□□□□ 0.34
SLC1A4-201ENST00000234256 HCRTO43612 131 aa17.2■□□□□ 0.34
SLC1A4-201ENST00000234256 DCTN2Q13561 401 aaKnown RBP17.2■□□□□ 0.34
SLC1A4-201ENST00000234256 PLCL1Q15111 1095 aa17.2■□□□□ 0.34
SLC1A4-201ENST00000234256 NAT8LQ8N9F0 302 aa17.2■□□□□ 0.34
SLC1A4-201ENST00000234256 LPGAT1Q92604 370 aa17.2■□□□□ 0.34
SLC1A4-201ENST00000234256 PRPF19Q9UMS4 504 aaKnown RBP17.2■□□□□ 0.34
SLC1A4-201ENST00000234256 SMIM35A0A1B0GVV1 85 aa17.2■□□□□ 0.34
SLC1A4-201ENST00000234256 VPS4BO75351 444 aa17.2■□□□□ 0.34
SLC1A4-201ENST00000234256 IPO13O94829 963 aaKnown RBP17.2■□□□□ 0.34
SLC1A4-201ENST00000234256 ZBTB11O95625 1053 aaPredicted RBP17.2■□□□□ 0.34
SLC1A4-201ENST00000234256 PEX2P28328 305 aa17.2■□□□□ 0.34
SLC1A4-201ENST00000234256 GRK4P32298 578 aa17.2■□□□□ 0.34
SLC1A4-201ENST00000234256 GPR107Q5VW38 600 aa17.2■□□□□ 0.34
SLC1A4-201ENST00000234256 TAC4Q86UU9 113 aa17.2■□□□□ 0.34
SLC1A4-201ENST00000234256 TRIM48Q8IWZ4 208 aa17.2■□□□□ 0.34
SLC1A4-201ENST00000234256 STK40Q8N2I9 435 aa17.2■□□□□ 0.34
SLC1A4-201ENST00000234256 FSTL5Q8N475 847 aaPredicted RBP17.2■□□□□ 0.34
SLC1A4-201ENST00000234256 GPR156Q8NFN8 814 aa17.2■□□□□ 0.34
SLC1A4-201ENST00000234256 UCMAQ8WVF2 138 aa17.2■□□□□ 0.34
SLC1A4-201ENST00000234256 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.2■□□□□ 0.34
SLC1A4-201ENST00000234256 TBL1XO60907 577 aa17.19■□□□□ 0.34
SLC1A4-201ENST00000234256 MC4RP32245 332 aa17.19■□□□□ 0.34
SLC1A4-201ENST00000234256 SLC5A3P53794 718 aa17.19■□□□□ 0.34
SLC1A4-201ENST00000234256 ITGADQ13349 1161 aa17.19■□□□□ 0.34
SLC1A4-201ENST00000234256 VPS26BQ4G0F5 336 aa17.19■□□□□ 0.34
SLC1A4-201ENST00000234256 PITRM1Q5JRX3 1037 aa17.19■□□□□ 0.34
SLC1A4-201ENST00000234256 HECTD2Q5U5R9 776 aa17.19■□□□□ 0.34
SLC1A4-201ENST00000234256 AAGABQ6PD74 315 aa17.19■□□□□ 0.34
SLC1A4-201ENST00000234256 ITIH5Q86UX2 942 aa17.19■□□□□ 0.34
SLC1A4-201ENST00000234256 CIR1Q86X95 450 aaPredicted RBP17.19■□□□□ 0.34
SLC1A4-201ENST00000234256 ACTRT2Q8TDY3 377 aa17.19■□□□□ 0.34
SLC1A4-201ENST00000234256 TSSK3Q96PN8 268 aa17.19■□□□□ 0.34
SLC1A4-201ENST00000234256 POLD2P49005 469 aa17.19■□□□□ 0.34
SLC1A4-201ENST00000234256 PRKAG1P54619 331 aa17.19■□□□□ 0.34
SLC1A4-201ENST00000234256 RALGPS2Q86X27 583 aaPredicted RBP17.19■□□□□ 0.34
SLC1A4-201ENST00000234256 C8orf59Q8N0T1 100 aaPredicted RBP17.19■□□□□ 0.34
SLC1A4-201ENST00000234256 MCRS1Q96EZ8 462 aa17.19■□□□□ 0.34
SLC1A4-201ENST00000234256 HMX1Q9NP08 348 aaPredicted RBP17.19■□□□□ 0.34
SLC1A4-201ENST00000234256 PCDH12Q9NPG4 1184 aa17.19■□□□□ 0.34
SLC1A4-201ENST00000234256 GMIPQ9P107 970 aa17.19■□□□□ 0.34
SLC1A4-201ENST00000234256 GCATO75600 419 aa17.19■□□□□ 0.34
SLC1A4-201ENST00000234256 TGDSO95455 350 aa17.19■□□□□ 0.34
SLC1A4-201ENST00000234256 CHRNGP07510 517 aa17.19■□□□□ 0.34
SLC1A4-201ENST00000234256 PTPN3P26045 913 aa17.19■□□□□ 0.34
SLC1A4-201ENST00000234256 FLT3LGP49771 235 aa17.19■□□□□ 0.34
SLC1A4-201ENST00000234256 NR1H2P55055 460 aa17.19■□□□□ 0.34
SLC1A4-201ENST00000234256 INSCQ1MX18 579 aa17.19■□□□□ 0.34
SLC1A4-201ENST00000234256 LSM12Q3MHD2 195 aaKnown RBP17.19■□□□□ 0.34
SLC1A4-201ENST00000234256 LINGO4Q6UY18 593 aa17.19■□□□□ 0.34
SLC1A4-201ENST00000234256 ARHGEF3Q9NR81 526 aa17.19■□□□□ 0.34
SLC1A4-201ENST00000234256 GIT1Q9Y2X7 761 aa17.19■□□□□ 0.34
SLC1A4-201ENST00000234256 PCDHGC4Q9Y5F7 938 aa17.19■□□□□ 0.34
SLC1A4-201ENST00000234256 SF3B1O75533 1304 aaKnown RBP eCLIP17.18■□□□□ 0.348e-6■■■■■ 107
SLC1A4-201ENST00000234256 TOP3BO95985 862 aaKnown RBP17.18■□□□□ 0.34
SLC1A4-201ENST00000234256 SPATA31D3P0C874 917 aa17.18■□□□□ 0.34
SLC1A4-201ENST00000234256 UQCRBP14927 111 aa17.18■□□□□ 0.34
SLC1A4-201ENST00000234256 VCLP18206 1134 aa17.18■□□□□ 0.34
SLC1A4-201ENST00000234256 GSTA3Q16772 222 aa17.18■□□□□ 0.34
SLC1A4-201ENST00000234256 BRMS1LQ5PSV4 323 aa17.18■□□□□ 0.34
SLC1A4-201ENST00000234256 TRAF7Q6Q0C0 670 aa17.18■□□□□ 0.34
SLC1A4-201ENST00000234256 SPATA31D4Q6ZUB0 917 aa17.18■□□□□ 0.34
SLC1A4-201ENST00000234256 SCAMP5Q8TAC9 235 aa17.18■□□□□ 0.34
SLC1A4-201ENST00000234256 TEKT5Q96M29 485 aa17.18■□□□□ 0.34
SLC1A4-201ENST00000234256 RNF208Q9H0X6 261 aa17.18■□□□□ 0.34
SLC1A4-201ENST00000234256 RNF39Q9H2S5 420 aa17.18■□□□□ 0.34
SLC1A4-201ENST00000234256 REEP1Q9H902 201 aa17.18■□□□□ 0.34
SLC1A4-201ENST00000234256 KCNH1O95259 989 aa17.18■□□□□ 0.34
SLC1A4-201ENST00000234256 MLYCDO95822 493 aa17.18■□□□□ 0.34
SLC1A4-201ENST00000234256 CATP04040 527 aaKnown RBP17.18■□□□□ 0.34
SLC1A4-201ENST00000234256 SPPL2CQ8IUH8 684 aa17.18■□□□□ 0.34
SLC1A4-201ENST00000234256 RDH11Q8TC12 318 aa17.18■□□□□ 0.34
SLC1A4-201ENST00000234256 ELMO1Q92556 727 aa17.18■□□□□ 0.34
SLC1A4-201ENST00000234256 ZNF180Q9UJW8 692 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 328.9 ms