RNA–Protein interactions for RNA: ENST00000226798.8

FRG1-201, Transcript of FSHD region gene 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FRG1, Length 1,074 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRG1-201ENST00000226798 PCDH12Q9NPG4 1184 aa11.66□□□□□ -0.54
FRG1-201ENST00000226798 LHX3Q9UBR4 397 aa11.66□□□□□ -0.54
FRG1-201ENST00000226798 RNF215Q9Y6U7 377 aa11.66□□□□□ -0.54
FRG1-201ENST00000226798 MYO9AB2RTY4 2548 aa11.66□□□□□ -0.54
FRG1-201ENST00000226798 SPTBN1Q01082 2364 aaKnown RBP11.65□□□□□ -0.54
FRG1-201ENST00000226798 ZFC3H1O60293 1989 aaKnown RBP11.65□□□□□ -0.54
FRG1-201ENST00000226798 C2CD4BA6NLJ0 364 aa11.65□□□□□ -0.54
FRG1-201ENST00000226798 PPFIA2O75334 1257 aa11.65□□□□□ -0.54
FRG1-201ENST00000226798 PIGNO95427 931 aa11.65□□□□□ -0.54
FRG1-201ENST00000226798 MMEP08473 750 aa11.65□□□□□ -0.54
FRG1-201ENST00000226798 PLEKP08567 350 aaPredicted RBP11.65□□□□□ -0.54
FRG1-201ENST00000226798 CD82P27701 267 aa11.65□□□□□ -0.54
FRG1-201ENST00000226798 SDC4P31431 198 aa11.65□□□□□ -0.54
FRG1-201ENST00000226798 PTPN9P43378 593 aa11.65□□□□□ -0.54
FRG1-201ENST00000226798 LIG3P49916 1009 aa11.65□□□□□ -0.54
FRG1-201ENST00000226798 HDAC4P56524 1084 aa11.65□□□□□ -0.54
FRG1-201ENST00000226798 KIAA1024LP59773 190 aa11.65□□□□□ -0.54
FRG1-201ENST00000226798 RHOAP61586 193 aa11.65□□□□□ -0.54
FRG1-201ENST00000226798 CYP4F2P78329 520 aa11.65□□□□□ -0.54
FRG1-201ENST00000226798 CLCA4Q14CN2 919 aa11.65□□□□□ -0.54
FRG1-201ENST00000226798 UGP2Q16851 508 aa11.65□□□□□ -0.54
FRG1-201ENST00000226798 C14orf28Q4W4Y0 310 aa11.65□□□□□ -0.54
FRG1-201ENST00000226798 MIIPQ5JXC2 388 aa11.65□□□□□ -0.54
FRG1-201ENST00000226798 NAA35Q5VZE5 725 aa11.65□□□□□ -0.54
FRG1-201ENST00000226798 RTL3Q8N8U3 475 aaKnown RBP11.65□□□□□ -0.54
FRG1-201ENST00000226798 Q8N9G6 341 aaPredicted RBP11.65□□□□□ -0.54
FRG1-201ENST00000226798 ZSCAN1Q8NBB4 408 aa11.65□□□□□ -0.54
FRG1-201ENST00000226798 JOSD2Q8TAC2 188 aa11.65□□□□□ -0.54
FRG1-201ENST00000226798 GPT2Q8TD30 523 aa11.65□□□□□ -0.54
FRG1-201ENST00000226798 RXFP2Q8WXD0 754 aa11.65□□□□□ -0.54
FRG1-201ENST00000226798 OR1E3Q8WZA6 343 aa11.65□□□□□ -0.54
FRG1-201ENST00000226798 USP7Q93009 1102 aa11.65□□□□□ -0.54
FRG1-201ENST00000226798 NTAN1Q96AB6 310 aa11.65□□□□□ -0.54
FRG1-201ENST00000226798 HMCESQ96FZ2 354 aa11.65□□□□□ -0.54
FRG1-201ENST00000226798 EXOC2Q96KP1 924 aa11.65□□□□□ -0.54
FRG1-201ENST00000226798 CMKLR1Q99788 373 aa11.65□□□□□ -0.54
FRG1-201ENST00000226798 NDST4Q9H3R1 872 aa11.65□□□□□ -0.54
FRG1-201ENST00000226798 FGF22Q9HCT0 170 aa11.65□□□□□ -0.54
FRG1-201ENST00000226798 GEMIN8Q9NWZ8 242 aaKnown RBP11.65□□□□□ -0.54
FRG1-201ENST00000226798 TMEM202A6NGA9 273 aa11.64□□□□□ -0.55
FRG1-201ENST00000226798 BHMG1C9JSJ3 638 aaPredicted RBP11.64□□□□□ -0.55
FRG1-201ENST00000226798 F8VZ95 297 aa11.64□□□□□ -0.55
FRG1-201ENST00000226798 NUDT21O43809 227 aaKnown RBP11.64□□□□□ -0.55
FRG1-201ENST00000226798 GADD45BO75293 160 aaPredicted RBP11.64□□□□□ -0.55
FRG1-201ENST00000226798 TNFP01375 233 aa11.64□□□□□ -0.55
FRG1-201ENST00000226798 PCCBP05166 539 aa11.64□□□□□ -0.55
FRG1-201ENST00000226798 MMP8P22894 467 aa11.64□□□□□ -0.55
FRG1-201ENST00000226798 XPAP23025 273 aaPredicted RBP11.64□□□□□ -0.55
FRG1-201ENST00000226798 MAPK10P53779 464 aa11.64□□□□□ -0.55
FRG1-201ENST00000226798 TLE1Q04724 770 aa11.64□□□□□ -0.55
FRG1-201ENST00000226798 C16orf72Q14CZ0 275 aa11.64□□□□□ -0.55
FRG1-201ENST00000226798 KLHDC7AQ5VTJ3 777 aa11.64□□□□□ -0.55
FRG1-201ENST00000226798 ZSWIM9Q86XI8 627 aa11.64□□□□□ -0.55
FRG1-201ENST00000226798 PLA2G15Q8NCC3 412 aa11.64□□□□□ -0.55
FRG1-201ENST00000226798 FAM46DQ8NEK8 389 aa11.64□□□□□ -0.55
FRG1-201ENST00000226798 OR56A4Q8NGH8 313 aa11.64□□□□□ -0.55
FRG1-201ENST00000226798 FUBP1Q96AE4 644 aaKnown RBP11.64□□□□□ -0.55
FRG1-201ENST00000226798 SLC25A18Q9H1K4 315 aa11.64□□□□□ -0.55
FRG1-201ENST00000226798 SEMA6CQ9H3T2 930 aa11.64□□□□□ -0.55
FRG1-201ENST00000226798 SUV39H2Q9H5I1 410 aa11.64□□□□□ -0.55
FRG1-201ENST00000226798 KIAA1468Q9P260 1216 aa11.64□□□□□ -0.55
FRG1-201ENST00000226798 LRIT1Q9P2V4 623 aa11.64□□□□□ -0.55
FRG1-201ENST00000226798 NOCTQ9UK39 431 aaKnown RBP11.64□□□□□ -0.55
FRG1-201ENST00000226798 ATP8A1Q9Y2Q0 1164 aa11.64□□□□□ -0.55
FRG1-201ENST00000226798 DAAM1Q9Y4D1 1078 aa11.64□□□□□ -0.55
FRG1-201ENST00000226798 PCDHB11Q9Y5F2 797 aa11.64□□□□□ -0.55
FRG1-201ENST00000226798 NOTCH2Q04721 2471 aa11.64□□□□□ -0.55
FRG1-201ENST00000226798 ITPR2Q14571 2701 aa11.64□□□□□ -0.55
FRG1-201ENST00000226798 CRYBG3Q68DQ2 2970 aa11.63□□□□□ -0.55
FRG1-201ENST00000226798 CFAP69A5D8W1 941 aa11.63□□□□□ -0.55
FRG1-201ENST00000226798 B4DGG1 531 aa11.63□□□□□ -0.55
FRG1-201ENST00000226798 RASA4BC9J798 803 aa11.63□□□□□ -0.55
FRG1-201ENST00000226798 AGRPO00253 132 aa11.63□□□□□ -0.55
FRG1-201ENST00000226798 TNFRSF10CO14798 259 aa11.63□□□□□ -0.55
FRG1-201ENST00000226798 RASA4O43374 803 aa11.63□□□□□ -0.55
FRG1-201ENST00000226798 CYP1A1P04798 512 aaPredicted RBP11.63□□□□□ -0.55
FRG1-201ENST00000226798 HOXC4P09017 264 aaPredicted RBP11.63□□□□□ -0.55
FRG1-201ENST00000226798 UCHL3P15374 230 aa11.63□□□□□ -0.55
FRG1-201ENST00000226798 ARSDP51689 593 aa11.63□□□□□ -0.55
FRG1-201ENST00000226798 YBEYP58557 167 aaPredicted RBP11.63□□□□□ -0.55
FRG1-201ENST00000226798 B4GALNT1Q00973 533 aa11.63□□□□□ -0.55
FRG1-201ENST00000226798 RALGDSQ12967 914 aa11.63□□□□□ -0.55
FRG1-201ENST00000226798 SERINC3Q13530 473 aa11.63□□□□□ -0.55
FRG1-201ENST00000226798 GRM3Q14832 879 aa11.63□□□□□ -0.55
FRG1-201ENST00000226798 NR1D2Q14995 579 aa11.63□□□□□ -0.55
FRG1-201ENST00000226798 CYTH1Q15438 398 aa11.63□□□□□ -0.55
FRG1-201ENST00000226798 PARP15Q460N3 678 aa11.63□□□□□ -0.55
FRG1-201ENST00000226798 MAP9Q49MG5 647 aa11.63□□□□□ -0.55
FRG1-201ENST00000226798 VWA3BQ502W6 1294 aa11.63□□□□□ -0.55
FRG1-201ENST00000226798 PHF19Q5T6S3 580 aa11.63□□□□□ -0.55
FRG1-201ENST00000226798 SPECC1LQ69YQ0 1117 aa11.63□□□□□ -0.55
FRG1-201ENST00000226798 ERAP2Q6P179 960 aa11.63□□□□□ -0.55
FRG1-201ENST00000226798 BRAT1Q6PJG6 821 aa11.63□□□□□ -0.55
FRG1-201ENST00000226798 ZNF438Q7Z4V0 828 aa11.63□□□□□ -0.55
FRG1-201ENST00000226798 TAF8Q7Z7C8 310 aa11.63□□□□□ -0.55
FRG1-201ENST00000226798 C17orf82Q86X59 251 aaPredicted RBP11.63□□□□□ -0.55
FRG1-201ENST00000226798 ZNF354CQ86Y25 554 aa11.63□□□□□ -0.55
FRG1-201ENST00000226798 DNAAF5Q86Y56 855 aa11.63□□□□□ -0.55
FRG1-201ENST00000226798 PYROXD2Q8N2H3 581 aa11.63□□□□□ -0.55
FRG1-201ENST00000226798 FAM172AQ8WUF8 416 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms