RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 DDX20Q9UHI6 824 aaKnown RBP13.29□□□□□ -0.28
COL1A1-201ENST00000225964 USP32Q8NFA0 1604 aa13.29□□□□□ -0.28
COL1A1-201ENST00000225964 CEMIPQ8WUJ3 1361 aa13.29□□□□□ -0.28
COL1A1-201ENST00000225964 NPEPPSL1A6NEC2 478 aa13.29□□□□□ -0.28
COL1A1-201ENST00000225964 FFAR2O15552 330 aa13.29□□□□□ -0.28
COL1A1-201ENST00000225964 BANF1O75531 89 aa13.29□□□□□ -0.28
COL1A1-201ENST00000225964 RNASEH2AO75792 299 aaKnown RBP13.29□□□□□ -0.28
COL1A1-201ENST00000225964 BRCC3P46736 316 aa13.29□□□□□ -0.28
COL1A1-201ENST00000225964 TBC1D25Q3MII6 688 aa13.29□□□□□ -0.28
COL1A1-201ENST00000225964 PPP1R26Q5T8A7 1209 aaPredicted RBP13.29□□□□□ -0.28
COL1A1-201ENST00000225964 ANKRD52Q8NB46 1076 aa13.29□□□□□ -0.28
COL1A1-201ENST00000225964 OR10H5Q8NGA6 315 aa13.29□□□□□ -0.28
COL1A1-201ENST00000225964 CD101Q93033 1021 aa13.29□□□□□ -0.28
COL1A1-201ENST00000225964 TRNT1Q96Q11 434 aaKnown RBP13.29□□□□□ -0.28
COL1A1-201ENST00000225964 AARSD1Q9BTE6 412 aaKnown RBP13.29□□□□□ -0.28
COL1A1-201ENST00000225964 TTPALQ9BTX7 342 aa13.29□□□□□ -0.28
COL1A1-201ENST00000225964 CDT1Q9H211 546 aa13.29□□□□□ -0.28
COL1A1-201ENST00000225964 CAB39LQ9H9S4 337 aa13.29□□□□□ -0.28
COL1A1-201ENST00000225964 FAM198AQ9UFP1 575 aa13.29□□□□□ -0.28
COL1A1-201ENST00000225964 MTF2Q9Y483 593 aaPredicted RBP13.29□□□□□ -0.28
COL1A1-201ENST00000225964 GMPPBQ9Y5P6 360 aa13.29□□□□□ -0.28
COL1A1-201ENST00000225964 MAGEB3O15480 346 aa13.29□□□□□ -0.28
COL1A1-201ENST00000225964 TNFAIP8O95379 198 aa13.29□□□□□ -0.28
COL1A1-201ENST00000225964 IFI35P80217 286 aaPredicted RBP13.29□□□□□ -0.28
COL1A1-201ENST00000225964 ZIK1Q3SY52 487 aaPredicted RBP13.29□□□□□ -0.28
COL1A1-201ENST00000225964 WASHC2DQ5SRD0 308 aa13.29□□□□□ -0.28
COL1A1-201ENST00000225964 OR14C36Q8NHC7 312 aa13.29□□□□□ -0.28
COL1A1-201ENST00000225964 PHF11Q9UIL8 331 aa13.29□□□□□ -0.28
COL1A1-201ENST00000225964 KPNA4O00629 521 aaPredicted RBP13.28□□□□□ -0.28
COL1A1-201ENST00000225964 OTCP00480 354 aa13.28□□□□□ -0.28
COL1A1-201ENST00000225964 GLUD2P49448 558 aa13.28□□□□□ -0.28
COL1A1-201ENST00000225964 CACNA2D1P54289 1103 aa13.28□□□□□ -0.28
COL1A1-201ENST00000225964 MANFP55145 182 aaKnown RBP13.28□□□□□ -0.28
COL1A1-201ENST00000225964 SMIM11AP58511 58 aa13.28□□□□□ -0.28
COL1A1-201ENST00000225964 ERVK-21P61565 698 aa13.28□□□□□ -0.28
COL1A1-201ENST00000225964 SLC34A1Q06495 639 aa13.28□□□□□ -0.28
COL1A1-201ENST00000225964 SPIRE1Q08AE8 756 aa13.28□□□□□ -0.28
COL1A1-201ENST00000225964 CDKAL1Q5VV42 579 aa13.28□□□□□ -0.28
COL1A1-201ENST00000225964 FBXO42Q6P3S6 717 aa13.28□□□□□ -0.28
COL1A1-201ENST00000225964 CHST9Q7L1S5 443 aa13.28□□□□□ -0.28
COL1A1-201ENST00000225964 JAZF1Q86VZ6 243 aa13.28□□□□□ -0.28
COL1A1-201ENST00000225964 APLFQ8IW19 511 aaPredicted RBP13.28□□□□□ -0.28
COL1A1-201ENST00000225964 C12orf29Q8N999 325 aa13.28□□□□□ -0.28
COL1A1-201ENST00000225964 ETNPPLQ8TBG4 499 aa13.28□□□□□ -0.28
COL1A1-201ENST00000225964 PPCDCQ96CD2 204 aa13.28□□□□□ -0.28
COL1A1-201ENST00000225964 MBOAT7Q96N66 472 aa13.28□□□□□ -0.28
COL1A1-201ENST00000225964 ZNF607Q96SK3 696 aa13.28□□□□□ -0.28
COL1A1-201ENST00000225964 MCMBPQ9BTE3 642 aa13.28□□□□□ -0.28
COL1A1-201ENST00000225964 C1orf50Q9BV19 199 aa13.28□□□□□ -0.28
COL1A1-201ENST00000225964 EPB41L1Q9H4G0 881 aa13.28□□□□□ -0.28
COL1A1-201ENST00000225964 FAM105AQ9NUU6 356 aa13.28□□□□□ -0.28
COL1A1-201ENST00000225964 ELOVL2Q9NXB9 296 aa13.28□□□□□ -0.28
COL1A1-201ENST00000225964 CNTNAP1P78357 1384 aa13.28□□□□□ -0.28
COL1A1-201ENST00000225964 TMEM88BA6NKF7 163 aa13.28□□□□□ -0.28
COL1A1-201ENST00000225964 FGBP02675 491 aa13.28□□□□□ -0.28
COL1A1-201ENST00000225964 CYP3A4P08684 503 aa13.28□□□□□ -0.28
COL1A1-201ENST00000225964 TREML2Q5T2D2 321 aa13.28□□□□□ -0.28
COL1A1-201ENST00000225964 TRPM4Q8TD43 1214 aa13.28□□□□□ -0.28
COL1A1-201ENST00000225964 ITCHQ96J02 903 aa13.28□□□□□ -0.28
COL1A1-201ENST00000225964 LAG3P18627 525 aa13.28□□□□□ -0.28
COL1A1-201ENST00000225964 CXCR3P49682 368 aa13.28□□□□□ -0.28
COL1A1-201ENST00000225964 TOP3AQ13472 1001 aaPredicted RBP13.28□□□□□ -0.28
COL1A1-201ENST00000225964 PLPPR4Q7Z2D5 763 aa13.28□□□□□ -0.28
COL1A1-201ENST00000225964 DAW1Q8N136 415 aa13.28□□□□□ -0.28
COL1A1-201ENST00000225964 TSPAN14Q8NG11 270 aa13.28□□□□□ -0.28
COL1A1-201ENST00000225964 NUAK2Q9H093 628 aa13.28□□□□□ -0.28
COL1A1-201ENST00000225964 TNKS2Q9H2K2 1166 aa13.28□□□□□ -0.28
COL1A1-201ENST00000225964 TAS2R14Q9NYV8 317 aa13.28□□□□□ -0.28
COL1A1-201ENST00000225964 LEF1Q9UJU2 399 aaPredicted RBP13.28□□□□□ -0.28
COL1A1-201ENST00000225964 MRPS33Q9Y291 106 aaKnown RBP13.28□□□□□ -0.28
COL1A1-201ENST00000225964 ZSCAN5CA6NGD5 496 aaPredicted RBP13.28□□□□□ -0.28
COL1A1-201ENST00000225964 VIPP01282 170 aa13.28□□□□□ -0.28
COL1A1-201ENST00000225964 SNRPB2P08579 225 aaKnown RBP13.28□□□□□ -0.28
COL1A1-201ENST00000225964 ITGA3P26006 1051 aa13.28□□□□□ -0.28
COL1A1-201ENST00000225964 GRIA3P42263 894 aa13.28□□□□□ -0.28
COL1A1-201ENST00000225964 LGALS3BPQ08380 585 aa13.28□□□□□ -0.28
COL1A1-201ENST00000225964 ITGA7Q13683 1181 aa13.28□□□□□ -0.28
COL1A1-201ENST00000225964 PCBP1Q15365 356 aaKnown RBP eCLIP13.28□□□□□ -0.28
COL1A1-201ENST00000225964 MZT2BQ6NZ67 158 aa13.28□□□□□ -0.28
COL1A1-201ENST00000225964 CHSY3Q70JA7 882 aa13.28□□□□□ -0.28
COL1A1-201ENST00000225964 NETO2Q8NC67 525 aa13.28□□□□□ -0.28
COL1A1-201ENST00000225964 POLR3HQ9Y535 204 aaPredicted RBP13.28□□□□□ -0.28
COL1A1-201ENST00000225964 FAM25EA8MYX2 175 aa13.28□□□□□ -0.28
COL1A1-201ENST00000225964 HOXC12P31275 282 aa13.28□□□□□ -0.28
COL1A1-201ENST00000225964 CAPSQ13938 189 aa13.28□□□□□ -0.28
COL1A1-201ENST00000225964 GRB14Q14449 540 aa13.28□□□□□ -0.28
COL1A1-201ENST00000225964 ANXA8L1Q5VT79 327 aa13.28□□□□□ -0.28
COL1A1-201ENST00000225964 OR52K2Q8NGK3 314 aa13.28□□□□□ -0.28
COL1A1-201ENST00000225964 SLC47A1Q96FL8 570 aa13.28□□□□□ -0.28
COL1A1-201ENST00000225964 ZNF155Q12901 538 aaPredicted RBP13.28□□□□□ -0.28
COL1A1-201ENST00000225964 TXNDC11Q6PKC3 985 aa13.28□□□□□ -0.28
COL1A1-201ENST00000225964 IQCF2Q8IXL9 164 aa13.28□□□□□ -0.28
COL1A1-201ENST00000225964 CD99L2Q8TCZ2 262 aa13.28□□□□□ -0.28
COL1A1-201ENST00000225964 ATXN2LQ8WWM7 1075 aaKnown RBP13.28□□□□□ -0.28
COL1A1-201ENST00000225964 PYDC1Q8WXC3 89 aa13.28□□□□□ -0.28
COL1A1-201ENST00000225964 PANX1Q96RD7 426 aa13.28□□□□□ -0.28
COL1A1-201ENST00000225964 PLK2Q9NYY3 685 aa13.28□□□□□ -0.28
COL1A1-201ENST00000225964 PSMD13Q9UNM6 376 aa13.28□□□□□ -0.28
COL1A1-201ENST00000225964 FAM153BP0C7A2 387 aa13.27□□□□□ -0.28
COL1A1-201ENST00000225964 MASP1P48740 699 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms