RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 SIRPGQ9P1W8 387 aa13.7□□□□□ -0.22
GABPB1-201ENST00000220429 PCSK1NQ9UHG2 260 aa13.7□□□□□ -0.22
GABPB1-201ENST00000220429 CST8O60676 142 aa13.7□□□□□ -0.22
GABPB1-201ENST00000220429 STAU1O95793 577 aaKnown RBP13.7□□□□□ -0.22
GABPB1-201ENST00000220429 MIPP30301 263 aa13.7□□□□□ -0.22
GABPB1-201ENST00000220429 GTF2A2P52657 109 aa13.7□□□□□ -0.22
GABPB1-201ENST00000220429 MS4A2Q01362 244 aa13.7□□□□□ -0.22
GABPB1-201ENST00000220429 KIZQ2M2Z5 673 aa13.7□□□□□ -0.22
GABPB1-201ENST00000220429 CDHR3Q6ZTQ4 885 aa13.7□□□□□ -0.22
GABPB1-201ENST00000220429 PSD4Q8NDX1 1056 aa13.7□□□□□ -0.22
GABPB1-201ENST00000220429 OR13F1Q8NGS4 319 aa13.7□□□□□ -0.22
GABPB1-201ENST00000220429 OR5H6Q8NGV6 325 aa13.7□□□□□ -0.22
GABPB1-201ENST00000220429 ACTL9Q8TC94 416 aa13.7□□□□□ -0.22
GABPB1-201ENST00000220429 HTRA1Q92743 480 aa13.7□□□□□ -0.22
GABPB1-201ENST00000220429 KIF12Q96FN5 646 aa13.7□□□□□ -0.22
GABPB1-201ENST00000220429 ADPGKQ9BRR6 497 aa13.7□□□□□ -0.22
GABPB1-201ENST00000220429 CHID1Q9BWS9 393 aa13.7□□□□□ -0.22
GABPB1-201ENST00000220429 SLC4A5Q9BY07 1137 aa13.7□□□□□ -0.22
GABPB1-201ENST00000220429 SGK1O00141 431 aa13.7□□□□□ -0.22
GABPB1-201ENST00000220429 IFNB1P01574 187 aa13.7□□□□□ -0.22
GABPB1-201ENST00000220429 DBTP11182 482 aaKnown RBP13.7□□□□□ -0.22
GABPB1-201ENST00000220429 FGFR3P22607 806 aa13.7□□□□□ -0.22
GABPB1-201ENST00000220429 SLC26A3P40879 764 aa13.7□□□□□ -0.22
GABPB1-201ENST00000220429 PTPN9P43378 593 aa13.7□□□□□ -0.22
GABPB1-201ENST00000220429 ATXN3P54252 364 aaPredicted RBP13.7□□□□□ -0.22
GABPB1-201ENST00000220429 SMARCB1Q12824 385 aa13.7□□□□□ -0.22
GABPB1-201ENST00000220429 RNASEH2BQ5TBB1 312 aaKnown RBP13.7□□□□□ -0.22
GABPB1-201ENST00000220429 PDPK2PQ6A1A2 396 aa13.7□□□□□ -0.22
GABPB1-201ENST00000220429 BBS12Q6ZW61 710 aa13.7□□□□□ -0.22
GABPB1-201ENST00000220429 ZCCHC7Q8N3Z6 543 aaKnown RBP13.7□□□□□ -0.22
GABPB1-201ENST00000220429 SNX31Q8N9S9 440 aa13.7□□□□□ -0.22
GABPB1-201ENST00000220429 C7orf57Q8NEG2 295 aa13.7□□□□□ -0.22
GABPB1-201ENST00000220429 OR6J1Q8NGC5 347 aa13.7□□□□□ -0.22
GABPB1-201ENST00000220429 PIWIL1Q96J94 861 aaKnown RBP13.7□□□□□ -0.22
GABPB1-201ENST00000220429 TINF2Q9BSI4 451 aa13.7□□□□□ -0.22
GABPB1-201ENST00000220429 PCDH9Q9HC56 1237 aa13.7□□□□□ -0.22
GABPB1-201ENST00000220429 POLMQ9NP87 494 aaPredicted RBP13.7□□□□□ -0.22
GABPB1-201ENST00000220429 SETD4Q9NVD3 440 aa13.7□□□□□ -0.22
GABPB1-201ENST00000220429 DUS2Q9NX74 493 aaKnown RBP13.7□□□□□ -0.22
GABPB1-201ENST00000220429 A0A1W2PQ72 361 aa13.69□□□□□ -0.22
GABPB1-201ENST00000220429 ATP6V1G2-DDX39BF2Z307 99 aa13.69□□□□□ -0.22
GABPB1-201ENST00000220429 PIK3R2O00459 728 aa13.69□□□□□ -0.22
GABPB1-201ENST00000220429 ICAM2P13598 275 aa13.69□□□□□ -0.22
GABPB1-201ENST00000220429 AP2S1P53680 142 aaPredicted RBP13.69□□□□□ -0.22
GABPB1-201ENST00000220429 GDF10P55107 478 aa13.69□□□□□ -0.22
GABPB1-201ENST00000220429 BFSP2Q13515 415 aa13.69□□□□□ -0.22
GABPB1-201ENST00000220429 MORF4L2Q15014 288 aa13.69□□□□□ -0.22
GABPB1-201ENST00000220429 FAM102AQ5T9C2 384 aaPredicted RBP13.69□□□□□ -0.22
GABPB1-201ENST00000220429 TRNP1Q6NT89 227 aa13.69□□□□□ -0.22
GABPB1-201ENST00000220429 BNC2Q6ZN30 1099 aaPredicted RBP13.69□□□□□ -0.22
GABPB1-201ENST00000220429 ATG14Q6ZNE5 492 aa13.69□□□□□ -0.22
GABPB1-201ENST00000220429 PARP8Q8N3A8 854 aa13.69□□□□□ -0.22
GABPB1-201ENST00000220429 C12orf29Q8N999 325 aa13.69□□□□□ -0.22
GABPB1-201ENST00000220429 PPP1R13LQ8WUF5 828 aa13.69□□□□□ -0.22
GABPB1-201ENST00000220429 GLT1D1Q96MS3 346 aa13.69□□□□□ -0.22
GABPB1-201ENST00000220429 CDRT15Q96T59 188 aa13.69□□□□□ -0.22
GABPB1-201ENST00000220429 ZNF221Q9UK13 617 aa13.69□□□□□ -0.22
GABPB1-201ENST00000220429 TSPAN16Q9UKR8 245 aa13.69□□□□□ -0.22
GABPB1-201ENST00000220429 AP3M1Q9Y2T2 418 aa13.69□□□□□ -0.22
GABPB1-201ENST00000220429 PDCD11Q14690 1871 aaKnown RBP13.69□□□□□ -0.22
GABPB1-201ENST00000220429 OR5K3A6NET4 321 aa13.69□□□□□ -0.22
GABPB1-201ENST00000220429 PPEF2O14830 753 aa13.69□□□□□ -0.22
GABPB1-201ENST00000220429 EPN2O95208 641 aa13.69□□□□□ -0.22
GABPB1-201ENST00000220429 TRUB2O95900 331 aaKnown RBP13.69□□□□□ -0.22
GABPB1-201ENST00000220429 GNAO1P09471 354 aa13.69□□□□□ -0.22
GABPB1-201ENST00000220429 NCF2P19878 526 aaPredicted RBP13.69□□□□□ -0.22
GABPB1-201ENST00000220429 HOXA11P31270 313 aaPredicted RBP13.69□□□□□ -0.22
GABPB1-201ENST00000220429 CLCNKBP51801 687 aa13.69□□□□□ -0.22
GABPB1-201ENST00000220429 GPLD1P80108 840 aa13.69□□□□□ -0.22
GABPB1-201ENST00000220429 AASDHQ4L235 1098 aaPredicted RBP13.69□□□□□ -0.22
GABPB1-201ENST00000220429 RAB6CQ53S08 254 aa13.69□□□□□ -0.22
GABPB1-201ENST00000220429 SH3PXD2AQ5TCZ1 1133 aa13.69□□□□□ -0.22
GABPB1-201ENST00000220429 LCLAT1Q6UWP7 414 aa13.69□□□□□ -0.22
GABPB1-201ENST00000220429 NT5DC4Q86YG4 428 aa13.69□□□□□ -0.22
GABPB1-201ENST00000220429 CMASQ8NFW8 434 aaPredicted RBP13.69□□□□□ -0.22
GABPB1-201ENST00000220429 ZFP90Q8TF47 636 aa13.69□□□□□ -0.22
GABPB1-201ENST00000220429 PEBP4Q96S96 227 aa13.69□□□□□ -0.22
GABPB1-201ENST00000220429 RAB6CQ9H0N0 254 aa13.69□□□□□ -0.22
GABPB1-201ENST00000220429 ABHD16BQ9H3Z7 469 aa13.69□□□□□ -0.22
GABPB1-201ENST00000220429 WASH6PQ9NQA3 447 aa13.69□□□□□ -0.22
GABPB1-201ENST00000220429 ADPRHL2Q9NX46 363 aa13.69□□□□□ -0.22
GABPB1-201ENST00000220429 VPS4AQ9UN37 437 aa13.69□□□□□ -0.22
GABPB1-201ENST00000220429 GINS2Q9Y248 185 aa13.69□□□□□ -0.22
GABPB1-201ENST00000220429 TOMM70O94826 608 aa13.68□□□□□ -0.22
GABPB1-201ENST00000220429 PFKMP08237 780 aa13.68□□□□□ -0.22
GABPB1-201ENST00000220429 MLLT3P42568 568 aaPredicted RBP13.68□□□□□ -0.22
GABPB1-201ENST00000220429 PIGGQ5H8A4 983 aa13.68□□□□□ -0.22
GABPB1-201ENST00000220429 SHEQ5VZ18 495 aa13.68□□□□□ -0.22
GABPB1-201ENST00000220429 PIWIL3Q7Z3Z3 882 aaKnown RBP13.68□□□□□ -0.22
GABPB1-201ENST00000220429 COLGALT2Q8IYK4 626 aa13.68□□□□□ -0.22
GABPB1-201ENST00000220429 CHAC2Q8WUX2 184 aa13.68□□□□□ -0.22
GABPB1-201ENST00000220429 TM9SF2Q99805 663 aa13.68□□□□□ -0.22
GABPB1-201ENST00000220429 NT5C1AQ9BXI3 368 aa13.68□□□□□ -0.22
GABPB1-201ENST00000220429 FAM49AQ9H0Q0 323 aaPredicted RBP13.68□□□□□ -0.22
GABPB1-201ENST00000220429 TRPV6Q9H1D0 765 aa13.68□□□□□ -0.22
GABPB1-201ENST00000220429 ADAMTS10Q9H324 1103 aa13.68□□□□□ -0.22
GABPB1-201ENST00000220429 SLA2Q9H6Q3 261 aa13.68□□□□□ -0.22
GABPB1-201ENST00000220429 CDHR5Q9HBB8 845 aa13.68□□□□□ -0.22
GABPB1-201ENST00000220429 DDX28Q9NUL7 540 aaKnown RBP13.68□□□□□ -0.22
GABPB1-201ENST00000220429 PKD2L2Q9NZM6 624 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms