RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 FAM227AF5H4B4 570 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 KCNH1O95259 989 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 FARS2O95363 451 aaKnown RBP3.46□□□□□ -1.86
NEB-201ENST00000172853 CD63P08962 238 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 GLUD2P49448 558 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 NRLP54845 237 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 SLC15A2Q16348 729 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 LCN1P1Q5VSP4 162 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 ZNF572Q7Z3I7 529 aaPredicted RBP3.46□□□□□ -1.86
NEB-201ENST00000172853 ZNF565Q8N9K5 539 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 DDX43Q9NXZ2 648 aaKnown RBP3.46□□□□□ -1.86
NEB-201ENST00000172853 RNGTTO60942 597 aaKnown RBP3.46□□□□□ -1.86
NEB-201ENST00000172853 FTCDO95954 541 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 GJB1P08034 283 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 THRAP10827 490 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 HOXB8P17481 243 aaPredicted RBP3.46□□□□□ -1.86
NEB-201ENST00000172853 HFE2Q6ZVN8 426 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 GALNTL5Q7Z4T8 443 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 GPAT4Q86UL3 456 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 RIOX2Q8IUF8 465 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 TUBB1Q9H4B7 451 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 EPB41L1Q9H4G0 881 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 PCDH18Q9HCL0 1135 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 ABCC13Q9NSE7 274 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 ERVK-18Q9QC07 812 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 LINC00854A0A1B0GVQ3 168 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 SNAP91O60641 907 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 ALDOAP04075 364 aaKnown RBP3.46□□□□□ -1.86
NEB-201ENST00000172853 TTKP33981 857 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 PSMD8P48556 350 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 TPTEP56180 551 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 TRIM25Q14258 630 aaKnown RBP3.46□□□□□ -1.86
NEB-201ENST00000172853 METTL16Q86W50 562 aaKnown RBP3.46□□□□□ -1.86
NEB-201ENST00000172853 C12orf56Q8IXR9 622 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 SLC22A15Q8IZD6 547 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 SAMD11Q96NU1 681 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 GFM1Q96RP9 751 aaKnown RBP3.46□□□□□ -1.86
NEB-201ENST00000172853 GGA2Q9UJY4 613 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 PRNPP04156 253 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 PGM1P36871 562 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 ACTR1BP42025 376 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 TKTL1P51854 596 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 ITPK1Q13572 414 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 DDI2Q5TDH0 399 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 GTPBP3Q969Y2 492 aaKnown RBP3.46□□□□□ -1.86
NEB-201ENST00000172853 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.46□□□□□ -1.86
NEB-201ENST00000172853 PHLPP1O60346 1717 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 COL15A1P39059 1388 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 EPHX1P07099 455 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 DPEP1P16444 411 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 NDUFS1P28331 727 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 ACLYP53396 1101 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 EIF5AP63241 154 aaKnown RBP3.46□□□□□ -1.86
NEB-201ENST00000172853 BNIP1Q12981 228 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 KCTD19Q17RG1 926 aaPredicted RBP3.46□□□□□ -1.86
NEB-201ENST00000172853 POMZP3Q6PJE2 187 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 DEFB118Q96PH6 123 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 TRAPPC9Q96Q05 1148 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 GAL3ST4Q96RP7 486 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 FAM83DQ9H4H8 585 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 NMRAL1Q9HBL8 299 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 ZFP14Q9HCL3 533 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 IKZF3Q9UKT9 509 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 CDK13Q14004 1512 aaKnown RBP3.46□□□□□ -1.86
NEB-201ENST00000172853 EFCAB6Q5THR3 1501 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 PER1O15534 1290 aaPredicted RBP3.46□□□□□ -1.86
NEB-201ENST00000172853 RNASEH2AO75792 299 aaKnown RBP3.46□□□□□ -1.86
NEB-201ENST00000172853 BAIAP3O94812 1187 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 POLD2P49005 469 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 IRF8Q02556 426 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 BST2Q10589 180 aaKnown RBP3.46□□□□□ -1.86
NEB-201ENST00000172853 DSG2Q14126 1118 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 MELKQ14680 651 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 SMAD1Q15797 465 aaKnown RBP3.46□□□□□ -1.86
NEB-201ENST00000172853 NIPAL1Q6NVV3 410 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 POLR1EQ9GZS1 481 aaKnown RBP3.46□□□□□ -1.86
NEB-201ENST00000172853 METTL5Q9NRN9 209 aaKnown RBP3.46□□□□□ -1.86
NEB-201ENST00000172853 ARHGAP20Q9P2F6 1191 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 SMARCB1Q12824 385 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 AMZ1Q400G9 498 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 GPR141Q7Z602 305 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 LAPTM4BQ86VI4 370 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 TMEM86AQ8N2M4 240 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 TEX47Q8TBZ9 253 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 PMEPA1Q969W9 287 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 SLC4A5Q9BY07 1137 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 DNAAF2Q9NVR5 837 aaKnown RBP3.46□□□□□ -1.86
NEB-201ENST00000172853 PHTF1Q9UMS5 762 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 A0A1B0GVC2 190 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 PSTPIP1O43586 416 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 S100A3P33764 101 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 RPS6P62753 249 aaKnown RBP3.46□□□□□ -1.86
NEB-201ENST00000172853 FPGSQ05932 587 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 MLIPQ5VWP3 458 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 C3P1Q6ZMU1 363 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 TMEM192Q8IY95 271 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 OR4K17Q8NGC6 315 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 ATOH1Q92858 354 aaPredicted RBP3.46□□□□□ -1.86
NEB-201ENST00000172853 PSKH2Q96QS6 385 aa3.46□□□□□ -1.86
NEB-201ENST00000172853 CRNNQ9UBG3 495 aaPredicted RBP3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms