RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 ZSWIM8A7E2V4 1837 aa14.09□□□□□ -0.15
USH1C-201ENST00000005226 TSC2P49815 1807 aa14.09□□□□□ -0.15
USH1C-201ENST00000005226 DYNC1LI2O43237 492 aaPredicted RBP14.09□□□□□ -0.15
USH1C-201ENST00000005226 OXTRP30559 389 aa14.09□□□□□ -0.15
USH1C-201ENST00000005226 YAP1P46937 504 aaKnown RBP14.09□□□□□ -0.15
USH1C-201ENST00000005226 PSMD8P48556 350 aa14.09□□□□□ -0.15
USH1C-201ENST00000005226 CDKN2DP55273 166 aa14.09□□□□□ -0.15
USH1C-201ENST00000005226 FOXA1P55317 472 aa14.09□□□□□ -0.15
USH1C-201ENST00000005226 DNAJB13P59910 316 aa14.09□□□□□ -0.15
USH1C-201ENST00000005226 ZNF792Q3KQV3 632 aa14.09□□□□□ -0.15
USH1C-201ENST00000005226 TOP6BLQ8N6T0 577 aa14.09□□□□□ -0.15
USH1C-201ENST00000005226 OR2T34Q8NGX1 318 aa14.09□□□□□ -0.15
USH1C-201ENST00000005226 OR2T3Q8NH03 318 aa14.09□□□□□ -0.15
USH1C-201ENST00000005226 SCAMP5Q8TAC9 235 aa14.09□□□□□ -0.15
USH1C-201ENST00000005226 CYGBQ8WWM9 190 aa14.09□□□□□ -0.15
USH1C-201ENST00000005226 ITFG2Q969R8 447 aa14.09□□□□□ -0.15
USH1C-201ENST00000005226 MRGPRX2Q96LB1 330 aa14.09□□□□□ -0.15
USH1C-201ENST00000005226 PAAF1Q9BRP4 392 aa14.09□□□□□ -0.15
USH1C-201ENST00000005226 SLC25A23Q9BV35 468 aa14.09□□□□□ -0.15
USH1C-201ENST00000005226 PIF1Q9H611 641 aa14.09□□□□□ -0.15
USH1C-201ENST00000005226 TREX1Q9NSU2 369 aa14.09□□□□□ -0.15
USH1C-201ENST00000005226 IPO11Q9UI26 975 aaKnown RBP14.09□□□□□ -0.15
USH1C-201ENST00000005226 CRYL1Q9Y2S2 319 aa14.09□□□□□ -0.15
USH1C-201ENST00000005226 KCTD3Q9Y597 815 aa14.09□□□□□ -0.15
USH1C-201ENST00000005226 ANKRD12Q6UB98 2062 aa14.09□□□□□ -0.15
USH1C-201ENST00000005226 MYLKQ15746 1914 aa14.09□□□□□ -0.15
USH1C-201ENST00000005226 A0A087X1B8 175 aa14.08□□□□□ -0.15
USH1C-201ENST00000005226 MAFKO60675 156 aa14.08□□□□□ -0.15
USH1C-201ENST00000005226 MOCS2O96007 188 aaPredicted RBP14.08□□□□□ -0.15
USH1C-201ENST00000005226 SMIM10L2AP0DMW4 78 aa14.08□□□□□ -0.15
USH1C-201ENST00000005226 SMIM10L2BP0DMW5 78 aa14.08□□□□□ -0.15
USH1C-201ENST00000005226 MTHFD1P11586 935 aaKnown RBP14.08□□□□□ -0.15
USH1C-201ENST00000005226 TRAP1Q12931 704 aaKnown RBP14.08□□□□□ -0.15
USH1C-201ENST00000005226 PTPRCAPQ14761 206 aa14.08□□□□□ -0.15
USH1C-201ENST00000005226 SNX17Q15036 470 aa14.08□□□□□ -0.15
USH1C-201ENST00000005226 PPP4R4Q6NUP7 873 aa14.08□□□□□ -0.15
USH1C-201ENST00000005226 LARP4Q71RC2 724 aaKnown RBP eCLIP14.08□□□□□ -0.15
USH1C-201ENST00000005226 C12orf43Q96C57 262 aaKnown RBP14.08□□□□□ -0.15
USH1C-201ENST00000005226 FCRL5Q96RD9 977 aa14.08□□□□□ -0.15
USH1C-201ENST00000005226 ANKRD60Q9BZ19 345 aa14.08□□□□□ -0.15
USH1C-201ENST00000005226 NAA50Q9GZZ1 169 aaKnown RBP14.08□□□□□ -0.15
USH1C-201ENST00000005226 CHCHD3Q9NX63 227 aaKnown RBP14.08□□□□□ -0.15
USH1C-201ENST00000005226 RAD54BQ9Y620 910 aa14.08□□□□□ -0.15
USH1C-201ENST00000005226 A0A0J9YYE9 177 aa14.08□□□□□ -0.16
USH1C-201ENST00000005226 RNF103-CHMP3A0A140T963 221 aa14.08□□□□□ -0.16
USH1C-201ENST00000005226 TREHO43280 583 aa14.08□□□□□ -0.16
USH1C-201ENST00000005226 LTA4HP09960 611 aaKnown RBP14.08□□□□□ -0.16
USH1C-201ENST00000005226 KCNE1P15382 129 aa14.08□□□□□ -0.16
USH1C-201ENST00000005226 NCK1P16333 377 aa14.08□□□□□ -0.16
USH1C-201ENST00000005226 SH3BP2P78314 561 aa14.08□□□□□ -0.16
USH1C-201ENST00000005226 POU4F1Q01851 419 aa14.08□□□□□ -0.16
USH1C-201ENST00000005226 MAPRE2Q15555 327 aa14.08□□□□□ -0.16
USH1C-201ENST00000005226 GEN1Q17RS7 908 aa14.08□□□□□ -0.16
USH1C-201ENST00000005226 INTS6LQ5JSJ4 861 aaKnown RBP14.08□□□□□ -0.16
USH1C-201ENST00000005226 PM20D1Q6GTS8 502 aa14.08□□□□□ -0.16
USH1C-201ENST00000005226 GPR141Q7Z602 305 aa14.08□□□□□ -0.16
USH1C-201ENST00000005226 TRIM74Q86UV6 250 aa14.08□□□□□ -0.16
USH1C-201ENST00000005226 TRIM73Q86UV7 250 aa14.08□□□□□ -0.16
USH1C-201ENST00000005226 C3orf58Q8NDZ4 430 aa14.08□□□□□ -0.16
USH1C-201ENST00000005226 OR6P1Q8NGX9 317 aa14.08□□□□□ -0.16
USH1C-201ENST00000005226 DQX1Q8TE96 717 aaKnown RBP14.08□□□□□ -0.16
USH1C-201ENST00000005226 ISOC1Q96CN7 298 aa14.08□□□□□ -0.16
USH1C-201ENST00000005226 NSUN5Q96P11 429 aaKnown RBP14.08□□□□□ -0.16
USH1C-201ENST00000005226 TCF12Q99081 682 aa14.08□□□□□ -0.16
USH1C-201ENST00000005226 EFHD1Q9BUP0 239 aa14.08□□□□□ -0.16
USH1C-201ENST00000005226 KATNBL1Q9H079 304 aa14.08□□□□□ -0.16
USH1C-201ENST00000005226 CNGB3Q9NQW8 809 aa14.08□□□□□ -0.16
USH1C-201ENST00000005226 HHLA1C9JL84 531 aa14.07□□□□□ -0.16
USH1C-201ENST00000005226 GABRDO14764 452 aa14.07□□□□□ -0.16
USH1C-201ENST00000005226 ATE1O95260 518 aa14.07□□□□□ -0.16
USH1C-201ENST00000005226 CAPN3P20807 821 aa14.07□□□□□ -0.16
USH1C-201ENST00000005226 GPX3P22352 226 aa14.07□□□□□ -0.16
USH1C-201ENST00000005226 BDNFP23560 247 aa14.07□□□□□ -0.16
USH1C-201ENST00000005226 ADRA1AP35348 466 aa14.07□□□□□ -0.16
USH1C-201ENST00000005226 IREB2P48200 963 aaKnown RBP14.07□□□□□ -0.16
USH1C-201ENST00000005226 ECT2LQ008S8 904 aa14.07□□□□□ -0.16
USH1C-201ENST00000005226 ITKQ08881 620 aa14.07□□□□□ -0.16
USH1C-201ENST00000005226 HECTD2Q5U5R9 776 aa14.07□□□□□ -0.16
USH1C-201ENST00000005226 AGAP9Q5VTM2 703 aa14.07□□□□□ -0.16
USH1C-201ENST00000005226 TWF2Q6IBS0 349 aaKnown RBP14.07□□□□□ -0.16
USH1C-201ENST00000005226 ELMSAN1Q6PJG2 1045 aa14.07□□□□□ -0.16
USH1C-201ENST00000005226 ERMP1Q7Z2K6 904 aa14.07□□□□□ -0.16
USH1C-201ENST00000005226 ANKRD23Q86SG2 305 aa14.07□□□□□ -0.16
USH1C-201ENST00000005226 CMTR2Q8IYT2 770 aaKnown RBP14.07□□□□□ -0.16
USH1C-201ENST00000005226 MIPOL1Q8TD10 442 aa14.07□□□□□ -0.16
USH1C-201ENST00000005226 LPPQ93052 612 aa14.07□□□□□ -0.16
USH1C-201ENST00000005226 UHRF1Q96T88 793 aaPredicted RBP14.07□□□□□ -0.16
USH1C-201ENST00000005226 EML4Q9HC35 981 aaKnown RBP14.07□□□□□ -0.16
USH1C-201ENST00000005226 MARCH4Q9P2E8 410 aaPredicted RBP14.07□□□□□ -0.16
USH1C-201ENST00000005226 SLC8A2Q9UPR5 921 aa14.07□□□□□ -0.16
USH1C-201ENST00000005226 USP22Q9UPT9 525 aa14.07□□□□□ -0.16
USH1C-201ENST00000005226 BTRCQ9Y297 605 aa14.07□□□□□ -0.16
USH1C-201ENST00000005226 ZNF711Q9Y462 761 aa14.07□□□□□ -0.16
USH1C-201ENST00000005226 A0A1B0GTL3 188 aa14.07□□□□□ -0.16
USH1C-201ENST00000005226 CXCL11O14625 94 aa14.07□□□□□ -0.16
USH1C-201ENST00000005226 CACNG3O60359 315 aa14.07□□□□□ -0.16
USH1C-201ENST00000005226 ANXA9O76027 345 aa14.07□□□□□ -0.16
USH1C-201ENST00000005226 ARSDP51689 593 aa14.07□□□□□ -0.16
USH1C-201ENST00000005226 CLCNKBP51801 687 aa14.07□□□□□ -0.16
USH1C-201ENST00000005226 WNT3AP56704 352 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms