RNA–Protein interactions for RNA: ENSMUST00000182047.1

Rnf4-204, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,944 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-204ENSMUST00000182047 Sort1Q6PHU5 825 aa13.5□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Pnma8aQ80VM8 430 aa13.5□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Ostm1Q8BGT0 338 aa13.5□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Vmn1r188Q8K3N2 308 aa13.5□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Tcf7l2Q924A0 459 aa13.5□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Trim8Q99PJ2 551 aa13.5□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Agpat3Q9D517 376 aa13.5□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Znrf4Q9DAH2 327 aa13.5□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Smg9Q9DB90 520 aa13.5□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Prss53Q571E5 552 aa13.5□□□□□ -0.25
Rnf4-204ENSMUST00000182047 PtprrQ62132 656 aa13.5□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Wee2Q66JT0 555 aa13.5□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Gtf2a2Q80ZM7 109 aa13.5□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Znf689Q8BKK5 500 aa13.5□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Kansl2Q8BQR4 486 aa13.5□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Itpk1Q8BYN3 419 aa13.5□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Pcdhb7Q8CDY9 829 aa13.5□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Ppp4r1Q8K2V1 951 aa13.5□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Snx15Q91WE1 337 aa13.5□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Mat2bQ99LB6 334 aa13.5□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Rrp15Q9CYX7 281 aaKnown RBP13.5□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Utp11Q9CZJ1 253 aaKnown RBP13.5□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Kdelc1Q9JHP7 502 aa13.5□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Akr1c12Q9JLI0 323 aa13.5□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Ern2Q9Z2E3 911 aa13.5□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Tnfaip1O70479 316 aa13.5□□□□□ -0.25
Rnf4-204ENSMUST00000182047 ChrngP04760 519 aa13.5□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Ckmt1P30275 418 aaKnown RBP13.5□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Tlx1P43345 332 aa13.5□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Wdr5P61965 334 aa13.5□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Eif4ebp2P70445 120 aa13.5□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Cyp2c65Q148B1 490 aa13.5□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Agap2Q3UHD9 1186 aa13.5□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Mtnr1aQ61184 353 aa13.5□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Gm5414Q6IFZ8 552 aa13.5□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Clec4b1Q7TS58 209 aa13.5□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Fstl5Q8BFR2 847 aa13.5□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Mpp7Q8BVD5 576 aa13.5□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Psapl1Q8C1C1 522 aa13.5□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Ssx2ipQ8VC66 615 aa13.5□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Sgsm3Q8VCZ6 750 aa13.5□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Rnh1Q91VI7 456 aa13.5□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Nmd3Q99L48 503 aaKnown RBP13.5□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Trim42Q9D2H5 723 aa13.5□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Ubqln5Q9D4I8 510 aa13.5□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Spata1Q9D5R4 444 aa13.5□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Serpinb9bQ9DAV6 377 aa13.5□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Smarcb1Q9Z0H3 385 aa13.5□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Col4a6B1AVK5 1691 aa13.49□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Nup205A0A0J9YUD5 2061 aaKnown RBP13.49□□□□□ -0.25
Rnf4-204ENSMUST00000182047 2310061I04RikB8JJ69 315 aa13.49□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Cyp4f17G3UW78 524 aa13.49□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Vmn2r86G5E8Y4 848 aa13.49□□□□□ -0.25
Rnf4-204ENSMUST00000182047 AvilO88398 819 aa13.49□□□□□ -0.25
Rnf4-204ENSMUST00000182047 PenkP22005 268 aa13.49□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Vps4bP46467 444 aaKnown RBP13.49□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Hsd11b2P51661 386 aa13.49□□□□□ -0.25
Rnf4-204ENSMUST00000182047 ClgnP52194 611 aa13.49□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Plk2P53351 682 aa13.49□□□□□ -0.25
Rnf4-204ENSMUST00000182047 E2f2P56931 443 aa13.49□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Lmf1Q3U3R4 574 aa13.49□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Pcnx4Q3UVY5 1174 aa13.49□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Maml1Q6T264 1020 aa13.49□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Tmem198Q8BG75 360 aa13.49□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Mterf2Q8BKY8 385 aa13.49□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Gjc2Q8BQU6 440 aa13.49□□□□□ -0.25
Rnf4-204ENSMUST00000182047 TbcdQ8BYA0 1196 aa13.49□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Cyp4f16Q99N17 524 aa13.49□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Tmem135Q9CYV5 458 aa13.49□□□□□ -0.25
Rnf4-204ENSMUST00000182047 NfkbizQ9EST8 728 aa13.49□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Gm6370A0A0G2JGX9 315 aa13.49□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Gm6309L7N481 315 aa13.49□□□□□ -0.25
Rnf4-204ENSMUST00000182047 KlO35082 1014 aa13.49□□□□□ -0.25
Rnf4-204ENSMUST00000182047 P01631 113 aa13.49□□□□□ -0.25
Rnf4-204ENSMUST00000182047 P01648 108 aa13.49□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Slc2a4P14142 509 aa13.49□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Ndst2P52850 883 aa13.49□□□□□ -0.25
Rnf4-204ENSMUST00000182047 NcanP55066 1268 aa13.49□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Abce1P61222 599 aaKnown RBP13.49□□□□□ -0.25
Rnf4-204ENSMUST00000182047 StacP97306 403 aa13.49□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Cdh6P97326 790 aa13.49□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Trim71Q1PSW8 855 aaKnown RBP13.49□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Dmc1Q61880 340 aa13.49□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Klhl14Q69ZK5 630 aa13.49□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Arhgap26Q6ZQ82 814 aa13.49□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Olfr792Q7TRH9 311 aa13.49□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Ccdc184Q8BMK5 191 aa13.49□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Clasp2Q8BRT1 1286 aaKnown RBP13.49□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Gbp5Q8CFB4 590 aa13.49□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Klhl2Q8JZP3 593 aa13.49□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Taf12Q8VE65 161 aa13.49□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Glra3Q91XP5 464 aa13.49□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Fam227aQ9D3V8 625 aa13.49□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Gde1Q9JL56 331 aa13.49□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Angptl2Q9R045 493 aa13.49□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Ttc30a2A2AKQ8 664 aa13.48□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Pramef17A2ASJ1 475 aa13.48□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Gm3173A6NAS3 172 aa13.48□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Gm3020E9Q3J7 150 aa13.48□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Gm2897K7N6T7 172 aa13.48□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 45.7 ms