RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Itpk1Q8BYN3 419 aa15.97■□□□□ 0.15
Trim39-203ENSMUST00000113706 Trim61Q8JZK6 461 aa15.97■□□□□ 0.15
Trim39-203ENSMUST00000113706 Nphs1Q9QZS7 1256 aa15.97■□□□□ 0.15
Trim39-203ENSMUST00000113706 Pdpk1Q9Z2A0 559 aa15.97■□□□□ 0.15
Trim39-203ENSMUST00000113706 4931406B18RikA2RSL7 367 aa15.97■□□□□ 0.15
Trim39-203ENSMUST00000113706 PrnpP04925 254 aa15.97■□□□□ 0.15
Trim39-203ENSMUST00000113706 Zfp217Q3U0X6 1041 aa15.97■□□□□ 0.15
Trim39-203ENSMUST00000113706 Scn2bQ56A07 215 aa15.97■□□□□ 0.15
Trim39-203ENSMUST00000113706 Sdf4Q61112 361 aa15.97■□□□□ 0.15
Trim39-203ENSMUST00000113706 Colgalt2Q6NVG7 625 aa15.97■□□□□ 0.15
Trim39-203ENSMUST00000113706 Gjc2Q8BQU6 440 aa15.97■□□□□ 0.15
Trim39-203ENSMUST00000113706 Cacnb2Q8CC27 655 aa15.97■□□□□ 0.15
Trim39-203ENSMUST00000113706 Ccdc28bQ8CEG5 200 aa15.97■□□□□ 0.15
Trim39-203ENSMUST00000113706 Adgrf1Q8VEC3 908 aa15.97■□□□□ 0.15
Trim39-203ENSMUST00000113706 Smg9Q9DB90 520 aa15.97■□□□□ 0.15
Trim39-203ENSMUST00000113706 Trip4Q9QXN3 581 aa15.97■□□□□ 0.15
Trim39-203ENSMUST00000113706 Ptpn4Q9WU22 926 aa15.97■□□□□ 0.15
Trim39-203ENSMUST00000113706 Ern2Q9Z2E3 911 aa15.97■□□□□ 0.15
Trim39-203ENSMUST00000113706 H2afb2S4R1M3 115 aa15.97■□□□□ 0.15
Trim39-203ENSMUST00000113706 Nsmce4aG3XA30 381 aa15.96■□□□□ 0.15
Trim39-203ENSMUST00000113706 Fam109bQ14B98 259 aa15.96■□□□□ 0.15
Trim39-203ENSMUST00000113706 Yipf3Q3UDR8 347 aa15.96■□□□□ 0.15
Trim39-203ENSMUST00000113706 Fem1cQ8CEF1 617 aa15.96■□□□□ 0.15
Trim39-203ENSMUST00000113706 TriobpQ99KW3 2014 aa15.96■□□□□ 0.15
Trim39-203ENSMUST00000113706 Sgo2bJ3QMK1 1167 aa15.96■□□□□ 0.15
Trim39-203ENSMUST00000113706 Ldb2O55203 373 aa15.96■□□□□ 0.15
Trim39-203ENSMUST00000113706 F3P20352 294 aa15.96■□□□□ 0.15
Trim39-203ENSMUST00000113706 Krt6aP50446 553 aa15.96■□□□□ 0.15
Trim39-203ENSMUST00000113706 Mpp1P70290 466 aa15.96■□□□□ 0.15
Trim39-203ENSMUST00000113706 PtprrQ62132 656 aa15.96■□□□□ 0.15
Trim39-203ENSMUST00000113706 Nrg1Q6DR99 700 aa15.96■□□□□ 0.15
Trim39-203ENSMUST00000113706 Gpr21Q8BX79 349 aa15.96■□□□□ 0.15
Trim39-203ENSMUST00000113706 Slc22a19Q8VCA0 551 aa15.96■□□□□ 0.15
Trim39-203ENSMUST00000113706 Rsph1Q8VIG3 301 aa15.96■□□□□ 0.15
Trim39-203ENSMUST00000113706 NtpcrQ9CQA9 190 aaKnown RBP15.96■□□□□ 0.15
Trim39-203ENSMUST00000113706 Zfp655Q9CZP3 541 aaKnown RBP15.96■□□□□ 0.15
Trim39-203ENSMUST00000113706 Duoxa2Q9D311 320 aa15.96■□□□□ 0.15
Trim39-203ENSMUST00000113706 TsaccQ9DA44 124 aa15.96■□□□□ 0.15
Trim39-203ENSMUST00000113706 IgtpQ9DCE9 423 aa15.96■□□□□ 0.15
Trim39-203ENSMUST00000113706 Abhd1Q9QZC8 412 aa15.96■□□□□ 0.15
Trim39-203ENSMUST00000113706 KcpQ3U492 1550 aa15.96■□□□□ 0.15
Trim39-203ENSMUST00000113706 Ighg3A0A1Y7VJN6 399 aa15.96■□□□□ 0.14
Trim39-203ENSMUST00000113706 FscbA1EGX6 1074 aa15.96■□□□□ 0.14
Trim39-203ENSMUST00000113706 Klhl41A2AUC9 606 aa15.96■□□□□ 0.14
Trim39-203ENSMUST00000113706 Cd9P40240 226 aa15.96■□□□□ 0.14
Trim39-203ENSMUST00000113706 Nudt1P53368 156 aa15.96■□□□□ 0.14
Trim39-203ENSMUST00000113706 Fam72aQ8BFZ8 149 aa15.96■□□□□ 0.14
Trim39-203ENSMUST00000113706 Fnbp1lQ8K012 605 aa15.96■□□□□ 0.14
Trim39-203ENSMUST00000113706 Vmn1r213Q8R278 384 aa15.96■□□□□ 0.14
Trim39-203ENSMUST00000113706 Cadm1Q8R5M8 456 aaKnown RBP15.96■□□□□ 0.14
Trim39-203ENSMUST00000113706 Olfr449Q8VGW8 311 aa15.96■□□□□ 0.14
Trim39-203ENSMUST00000113706 Necab2Q91ZP9 389 aa15.96■□□□□ 0.14
Trim39-203ENSMUST00000113706 Psmd9Q9CR00 222 aa15.96■□□□□ 0.14
Trim39-203ENSMUST00000113706 Lima1Q9ERG0 753 aaKnown RBP15.96■□□□□ 0.14
Trim39-203ENSMUST00000113706 Adam17Q9Z0F8 827 aa15.96■□□□□ 0.14
Trim39-203ENSMUST00000113706 Shcbp1Q9Z179 668 aa15.96■□□□□ 0.14
Trim39-203ENSMUST00000113706 Gm10250G3X9L6 160 aaKnown RBP15.95■□□□□ 0.14
Trim39-203ENSMUST00000113706 Ly6dP35459 127 aa15.95■□□□□ 0.14
Trim39-203ENSMUST00000113706 Cdk7Q03147 346 aa15.95■□□□□ 0.14
Trim39-203ENSMUST00000113706 Q3V0E1 1183 aa15.95■□□□□ 0.14
Trim39-203ENSMUST00000113706 Ptpn14Q62130 1189 aa15.95■□□□□ 0.14
Trim39-203ENSMUST00000113706 Arl5aQ80ZU0 179 aa15.95■□□□□ 0.14
Trim39-203ENSMUST00000113706 Rcn2Q8BP92 320 aa15.95■□□□□ 0.14
Trim39-203ENSMUST00000113706 C5ar2Q8BW93 344 aa15.95■□□□□ 0.14
Trim39-203ENSMUST00000113706 MfrpQ8K480 584 aa15.95■□□□□ 0.14
Trim39-203ENSMUST00000113706 Dync1li1Q8R1Q8 523 aa15.95■□□□□ 0.14
Trim39-203ENSMUST00000113706 DcxrQ91X52 244 aa15.95■□□□□ 0.14
Trim39-203ENSMUST00000113706 Ptdss1Q99LH2 473 aaKnown RBP15.95■□□□□ 0.14
Trim39-203ENSMUST00000113706 Kctd4Q9D7X1 259 aa15.95■□□□□ 0.14
Trim39-203ENSMUST00000113706 Q9D937 123 aaKnown RBP15.95■□□□□ 0.14
Trim39-203ENSMUST00000113706 Atp5hQ9DCX2 161 aa15.95■□□□□ 0.14
Trim39-203ENSMUST00000113706 Tmem215A7E1Z1 235 aa15.95■□□□□ 0.14
Trim39-203ENSMUST00000113706 Gm15155B1B034 138 aa15.95■□□□□ 0.14
Trim39-203ENSMUST00000113706 Gm20431E9PY39 371 aa15.95■□□□□ 0.14
Trim39-203ENSMUST00000113706 Tekt5G5E8A8 557 aa15.95■□□□□ 0.14
Trim39-203ENSMUST00000113706 Atp5bP56480 529 aaKnown RBP15.95■□□□□ 0.14
Trim39-203ENSMUST00000113706 Marveld2Q3UZP0 555 aa15.95■□□□□ 0.14
Trim39-203ENSMUST00000113706 Tigd3Q7TM95 470 aa15.95■□□□□ 0.14
Trim39-203ENSMUST00000113706 Elmo2Q8BHL5 732 aa15.95■□□□□ 0.14
Trim39-203ENSMUST00000113706 Sit1Q8C503 180 aa15.95■□□□□ 0.14
Trim39-203ENSMUST00000113706 Hacd3Q8K2C9 362 aa15.95■□□□□ 0.14
Trim39-203ENSMUST00000113706 Etv3Q8R4Z4 513 aa15.95■□□□□ 0.14
Trim39-203ENSMUST00000113706 Nol6Q8R5K4 1152 aaKnown RBP15.95■□□□□ 0.14
Trim39-203ENSMUST00000113706 MylkQ6PDN3 1941 aaKnown RBP15.95■□□□□ 0.14
Trim39-203ENSMUST00000113706 Vmn1r176G3UW31 304 aa15.94■□□□□ 0.14
Trim39-203ENSMUST00000113706 Chil3O35744 398 aa15.94■□□□□ 0.14
Trim39-203ENSMUST00000113706 Pde8aO88502 823 aa15.94■□□□□ 0.14
Trim39-203ENSMUST00000113706 NcanP55066 1268 aa15.94■□□□□ 0.14
Trim39-203ENSMUST00000113706 Ldb1P70662 411 aa15.94■□□□□ 0.14
Trim39-203ENSMUST00000113706 Arf5P84084 180 aaKnown RBP15.94■□□□□ 0.14
Trim39-203ENSMUST00000113706 Enpp3Q6DYE8 874 aa15.94■□□□□ 0.14
Trim39-203ENSMUST00000113706 Capn11Q6J756 714 aa15.94■□□□□ 0.14
Trim39-203ENSMUST00000113706 Mgat5bQ765H6 792 aa15.94■□□□□ 0.14
Trim39-203ENSMUST00000113706 Olfm2Q8BM13 448 aa15.94■□□□□ 0.14
Trim39-203ENSMUST00000113706 Ccdc184Q8BMK5 191 aa15.94■□□□□ 0.14
Trim39-203ENSMUST00000113706 Atg10Q8R1P4 215 aa15.94■□□□□ 0.14
Trim39-203ENSMUST00000113706 SardhQ99LB7 919 aa15.94■□□□□ 0.14
Trim39-203ENSMUST00000113706 Tmed5Q9CXE7 229 aa15.94■□□□□ 0.14
Trim39-203ENSMUST00000113706 Efhc2Q9D485 750 aa15.94■□□□□ 0.14
Trim39-203ENSMUST00000113706 Gm3604A0A087WPN2 559 aa15.94■□□□□ 0.14
Retrieved 100 of 22,080 RNA–protein pairs in 37 ms