RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Grk2Q99MK8 689 aa21.3■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Rpn2Q9DBG6 631 aaKnown RBP21.3■■□□□ 1
Ccdc88a-202ENSMUST00000109477 B9d1Q9R1S0 204 aa21.3■■□□□ 1
Ccdc88a-202ENSMUST00000109477 GghQ9Z0L8 317 aa21.3■■□□□ 1
Ccdc88a-202ENSMUST00000109477 2310061I04RikB8JJ69 315 aa21.29■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Ldb2O55203 373 aa21.29■■□□□ 1
Ccdc88a-202ENSMUST00000109477 PolP11369 1281 aa21.29■■□□□ 1
Ccdc88a-202ENSMUST00000109477 UmpsP13439 481 aaKnown RBP21.29■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Pabpc1P29341 636 aaKnown RBP21.29■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Serpina3cP29621 417 aa21.29■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Defa-rs12P50716 91 aa21.29■■□□□ 1
Ccdc88a-202ENSMUST00000109477 NcstnP57716 708 aa21.29■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Rps3P62908 243 aaKnown RBP21.29■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Brsk1Q5RJI5 778 aa21.29■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Cntn4Q69Z26 1026 aa21.29■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Naif1Q6PFD7 327 aa21.29■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Syt14Q7TN84 555 aa21.29■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Dyrk4Q8BI55 632 aa21.29■■□□□ 1
Ccdc88a-202ENSMUST00000109477 MtbpQ8BJS8 894 aaKnown RBP21.29■■□□□ 1
Ccdc88a-202ENSMUST00000109477 B130006D01RikQ8BRH6 153 aa21.29■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Washc5Q8C2E7 1159 aaKnown RBP21.29■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Olfr1019Q8VGS3 310 aa21.29■■□□□ 1
Ccdc88a-202ENSMUST00000109477 VitQ8VHI5 650 aa21.29■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Cdyl2Q9D5D8 503 aa21.29■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Q9D5Y0 588 aa21.29■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Fam83dQ9D7I8 585 aa21.29■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Oma1Q9D8H7 521 aa21.29■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Znf654Q9DAU9 571 aa21.29■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Tm9sf1Q9DBU0 606 aa21.29■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Pard6bQ9JK83 371 aa21.29■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Mtm1Q9Z2C5 603 aa21.29■■□□□ 1
Ccdc88a-202ENSMUST00000109477 OtofQ9ESF1 1997 aa21.29■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Ttc30a2A2AKQ8 664 aa21.29■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Tsga10ipF7A1F0 157 aa21.29■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Art2bO35975 289 aa21.29■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Cyp21P03940 487 aa21.29■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Uhmk1P97343 419 aa21.29■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Hbq1bQ3U0A6 142 aa21.29■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Armc7Q3UJZ3 198 aa21.29■■□□□ 1
Ccdc88a-202ENSMUST00000109477 ScinQ60604 715 aa21.29■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Adat2Q6P6J0 191 aa21.29■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Spon2Q8BMS2 330 aa21.29■■□□□ 1
Ccdc88a-202ENSMUST00000109477 AgmoQ8BS35 447 aa21.29■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Ttc30a1Q99J38 664 aa21.29■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Smarcd2Q99JR8 531 aaKnown RBP21.29■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Ttc30bQ9CY00 664 aa21.29■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Gpatch1Q9DBM1 930 aa21.29■■□□□ 1
Ccdc88a-202ENSMUST00000109477 CtsrQ9JIA9 334 aa21.29■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Dnajb1Q9QYJ3 340 aaKnown RBP21.29■■□□□ 1
Ccdc88a-202ENSMUST00000109477 RecqlQ9Z129 648 aa21.29■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Gm6370A0A0G2JGX9 315 aa21.28■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Rap1gds1E9Q912 607 aa21.28■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Tekt5G5E8A8 557 aa21.28■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Gm6309L7N481 315 aa21.28■■□□□ 1
Ccdc88a-202ENSMUST00000109477 RaxO35602 342 aa21.28■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Cyr61P18406 379 aa21.28■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Pdha1P35486 390 aaKnown RBP21.28■■□□□ 1
Ccdc88a-202ENSMUST00000109477 S100bP50114 92 aa21.28■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Znrf3Q5SSZ7 913 aa21.28■■□□□ 1
Ccdc88a-202ENSMUST00000109477 ThrspQ62264 150 aa21.28■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Krt77Q6IFZ6 572 aa21.28■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Znf280cQ6P3Y5 742 aa21.28■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Dclk2Q6PGN3 756 aa21.28■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Them6Q80ZW2 207 aa21.28■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Sfr1Q8BP27 319 aa21.28■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Mettl3Q8C3P7 580 aa21.28■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Dhcr24Q8VCH6 516 aaKnown RBP21.28■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Lrrc3bQ8VCH9 259 aa21.28■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Cyp2c70Q91W64 489 aa21.28■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Mrps33Q9D2R8 106 aa21.28■■□□□ 1
Ccdc88a-202ENSMUST00000109477 EefsecQ9JHW4 583 aa21.28■■□□□ 1
Ccdc88a-202ENSMUST00000109477 DmtnQ9WV69 405 aa21.28■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Trpm6Q8CIR4 2028 aa21.27■■□□□ 1
Ccdc88a-202ENSMUST00000109477 P01668 110 aa21.27■■□□□ 1
Ccdc88a-202ENSMUST00000109477 P01807 119 aa21.27■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Ctla2bP12400 113 aa21.27■■□□□ 1
Ccdc88a-202ENSMUST00000109477 CryaaP24622 196 aa21.27■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Atxn7l3bQ3UD01 97 aa21.27■■□□□ 1
Ccdc88a-202ENSMUST00000109477 HadhQ61425 314 aa21.27■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Mtmr12Q80TA6 747 aa21.27■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Zswim5Q80TC6 1188 aa21.27■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Arl5aQ80ZU0 179 aa21.27■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Gpr21Q8BX79 349 aa21.27■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Slco6c1Q8C0X7 706 aa21.27■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Mill2Q8HWE5 355 aa21.27■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Mapk8Q91Y86 384 aa21.27■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Lsm7Q9CQQ8 103 aaKnown RBP21.27■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Ska2Q9CR46 120 aa21.27■■□□□ 1
Ccdc88a-202ENSMUST00000109477 L3hypdhQ9CXA2 354 aa21.27■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Tbc1d20Q9D9I4 402 aa21.27■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Csnk1dQ9DC28 415 aa21.27■■□□□ 1
Ccdc88a-202ENSMUST00000109477 CasrQ9QY96 1079 aa21.27■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Sgk2Q9QZS5 367 aa21.27■■□□□ 1
Ccdc88a-202ENSMUST00000109477 Gm13101A2ASJ0 481 aa21.26■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Mroh7A2AVR2 1279 aa21.26■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Ccdc13D3YV10 709 aa21.26■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Cyp4a14O35728 507 aa21.26■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 DgkaO88673 730 aa21.26■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Sash1P59808 1230 aa21.26■□□□□ 0.99
Ccdc88a-202ENSMUST00000109477 Zhx1P70121 873 aa21.26■□□□□ 0.99
Retrieved 100 of 22,080 RNA–protein pairs in 21.3 ms