RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Ttc30a1Q99J38 664 aa22.83■■□□□ 1.25
Scn1b-201ENSMUST00000098548 Ttc30bQ9CY00 664 aa22.83■■□□□ 1.25
Scn1b-201ENSMUST00000098548 Prpsap1Q9D0M1 356 aa22.83■■□□□ 1.25
Scn1b-201ENSMUST00000098548 Duoxa2Q9D311 320 aa22.83■■□□□ 1.25
Scn1b-201ENSMUST00000098548 Tmem80Q9D3H0 123 aa22.83■■□□□ 1.25
Scn1b-201ENSMUST00000098548 Olfr1049A2ARZ0 308 aa22.82■■□□□ 1.24
Scn1b-201ENSMUST00000098548 Gm3259D3YUK0 475 aa22.82■■□□□ 1.24
Scn1b-201ENSMUST00000098548 Chrna4O70174 629 aa22.82■■□□□ 1.24
Scn1b-201ENSMUST00000098548 P01641 117 aa22.82■■□□□ 1.24
Scn1b-201ENSMUST00000098548 Gna12P27600 379 aa22.82■■□□□ 1.24
Scn1b-201ENSMUST00000098548 Gdf5P43027 495 aa22.82■■□□□ 1.24
Scn1b-201ENSMUST00000098548 B3gntl1Q3U129 357 aa22.82■■□□□ 1.24
Scn1b-201ENSMUST00000098548 Hsf5Q5ND04 624 aa22.82■■□□□ 1.24
Scn1b-201ENSMUST00000098548 RilpQ5ND29 369 aa22.82■■□□□ 1.24
Scn1b-201ENSMUST00000098548 Mfsd3Q5U419 412 aa22.82■■□□□ 1.24
Scn1b-201ENSMUST00000098548 Grid1Q61627 1009 aa22.82■■□□□ 1.24
Scn1b-201ENSMUST00000098548 Foxj1Q61660 421 aa22.82■■□□□ 1.24
Scn1b-201ENSMUST00000098548 Arl13bQ640N2 427 aa22.82■■□□□ 1.24
Scn1b-201ENSMUST00000098548 Q6GQU0 248 aa22.82■■□□□ 1.24
Scn1b-201ENSMUST00000098548 Ints6Q6PCM2 883 aa22.82■■□□□ 1.24
Scn1b-201ENSMUST00000098548 Igsf3Q6ZQA6 1194 aa22.82■■□□□ 1.24
Scn1b-201ENSMUST00000098548 Tecpr1Q80VP0 1166 aa22.82■■□□□ 1.24
Scn1b-201ENSMUST00000098548 Zmpste24Q80W54 475 aa22.82■■□□□ 1.24
Scn1b-201ENSMUST00000098548 Slc6a17Q8BJI1 727 aa22.82■■□□□ 1.24
Scn1b-201ENSMUST00000098548 Trerf1Q8BXJ2 1205 aa22.82■■□□□ 1.24
Scn1b-201ENSMUST00000098548 Zbtb49Q8BXX2 756 aa22.82■■□□□ 1.24
Scn1b-201ENSMUST00000098548 Trip10Q8CJ53 603 aa22.82■■□□□ 1.24
Scn1b-201ENSMUST00000098548 Vmn1r206Q8R277 312 aa22.82■■□□□ 1.24
Scn1b-201ENSMUST00000098548 HgsQ99LI8 775 aa22.82■■□□□ 1.24
Scn1b-201ENSMUST00000098548 Terb2Q9D494 218 aa22.82■■□□□ 1.24
Scn1b-201ENSMUST00000098548 Gpatch1Q9DBM1 930 aa22.82■■□□□ 1.24
Scn1b-201ENSMUST00000098548 Trove2O08848 538 aa22.81■■□□□ 1.24
Scn1b-201ENSMUST00000098548 PrkcdP28867 674 aa22.81■■□□□ 1.24
Scn1b-201ENSMUST00000098548 Cd9P40240 226 aa22.81■■□□□ 1.24
Scn1b-201ENSMUST00000098548 Pdcd2P46718 343 aa22.81■■□□□ 1.24
Scn1b-201ENSMUST00000098548 ItkQ03526 625 aa22.81■■□□□ 1.24
Scn1b-201ENSMUST00000098548 Nudt18Q3U2V3 323 aa22.81■■□□□ 1.24
Scn1b-201ENSMUST00000098548 Lmf1Q3U3R4 574 aa22.81■■□□□ 1.24
Scn1b-201ENSMUST00000098548 Prmt9Q3U3W5 846 aa22.81■■□□□ 1.24
Scn1b-201ENSMUST00000098548 Trafd1Q3UDK1 580 aa22.81■■□□□ 1.24
Scn1b-201ENSMUST00000098548 Ermp1Q3UVK0 898 aaKnown RBP22.81■■□□□ 1.24
Scn1b-201ENSMUST00000098548 Garnl3Q3V0G7 1038 aa22.81■■□□□ 1.24
Scn1b-201ENSMUST00000098548 Rnf43Q5NCP0 784 aa22.81■■□□□ 1.24
Scn1b-201ENSMUST00000098548 Abcd2Q61285 741 aa22.81■■□□□ 1.24
Scn1b-201ENSMUST00000098548 C2cd2lQ80X80 706 aa22.81■■□□□ 1.24
Scn1b-201ENSMUST00000098548 Fstl5Q8BFR2 847 aa22.81■■□□□ 1.24
Scn1b-201ENSMUST00000098548 Cox14Q8BH51 57 aa22.81■■□□□ 1.24
Scn1b-201ENSMUST00000098548 Zfp595Q8BIN6 625 aa22.81■■□□□ 1.24
Scn1b-201ENSMUST00000098548 Zfp719Q8BIV1 735 aa22.81■■□□□ 1.24
Scn1b-201ENSMUST00000098548 Slc43a1Q8BSM7 564 aa22.81■■□□□ 1.24
Scn1b-201ENSMUST00000098548 Hacd3Q8K2C9 362 aa22.81■■□□□ 1.24
Scn1b-201ENSMUST00000098548 Acad10Q8K370 1069 aa22.81■■□□□ 1.24
Scn1b-201ENSMUST00000098548 BfarQ8R079 450 aa22.81■■□□□ 1.24
Scn1b-201ENSMUST00000098548 Cd207Q8VBX4 331 aa22.81■■□□□ 1.24
Scn1b-201ENSMUST00000098548 Rpa1Q8VEE4 623 aaKnown RBP22.81■■□□□ 1.24
Scn1b-201ENSMUST00000098548 Glra3Q91XP5 464 aa22.81■■□□□ 1.24
Scn1b-201ENSMUST00000098548 CtsrQ9JIA9 334 aa22.81■■□□□ 1.24
Scn1b-201ENSMUST00000098548 HephQ9Z0Z4 1157 aa22.81■■□□□ 1.24
Scn1b-201ENSMUST00000098548 Il18rapQ9Z2B1 614 aa22.81■■□□□ 1.24
Scn1b-201ENSMUST00000098548 Col12a1Q60847 3120 aa22.81■■□□□ 1.24
Scn1b-201ENSMUST00000098548 Gm13283A0A087WPG5 182 aa22.8■■□□□ 1.24
Scn1b-201ENSMUST00000098548 Apba1B2RUJ5 842 aa22.8■■□□□ 1.24
Scn1b-201ENSMUST00000098548 Adamtsl5D3Z689 485 aa22.8■■□□□ 1.24
Scn1b-201ENSMUST00000098548 Taf4E9QAP7 1042 aaKnown RBP22.8■■□□□ 1.24
Scn1b-201ENSMUST00000098548 Gm2888K7N746 267 aa22.8■■□□□ 1.24
Scn1b-201ENSMUST00000098548 Ap3d1O54774 1199 aa22.8■■□□□ 1.24
Scn1b-201ENSMUST00000098548 Slc22a2O70577 553 aa22.8■■□□□ 1.24
Scn1b-201ENSMUST00000098548 Defa-rs2P17534 91 aa22.8■■□□□ 1.24
Scn1b-201ENSMUST00000098548 Tap1P21958 724 aa22.8■■□□□ 1.24
Scn1b-201ENSMUST00000098548 Ranbp9P69566 653 aa22.8■■□□□ 1.24
Scn1b-201ENSMUST00000098548 Fam196aQ3USH1 422 aa22.8■■□□□ 1.24
Scn1b-201ENSMUST00000098548 Slc22a16Q497L8 649 aa22.8■■□□□ 1.24
Scn1b-201ENSMUST00000098548 Tead4Q62296 427 aa22.8■■□□□ 1.24
Scn1b-201ENSMUST00000098548 Q8BGA7 448 aa22.8■■□□□ 1.24
Scn1b-201ENSMUST00000098548 Frmd4aQ8BIE6 1020 aa22.8■■□□□ 1.24
Scn1b-201ENSMUST00000098548 Mxra7Q9CZH7 178 aa22.8■■□□□ 1.24
Scn1b-201ENSMUST00000098548 4930449I24RikQ9D5E3 319 aa22.8■■□□□ 1.24
Scn1b-201ENSMUST00000098548 Tbc1d20Q9D9I4 402 aa22.8■■□□□ 1.24
Scn1b-201ENSMUST00000098548 Insl5Q9WUG6 135 aa22.8■■□□□ 1.24
Scn1b-201ENSMUST00000098548 Ap4b1Q9WV76 738 aa22.8■■□□□ 1.24
Scn1b-201ENSMUST00000098548 Tmem235B1AQL3 211 aa22.8■■□□□ 1.24
Scn1b-201ENSMUST00000098548 2310061I04RikB8JJ69 315 aa22.8■■□□□ 1.24
Scn1b-201ENSMUST00000098548 H2-Eb1P04230 264 aa22.8■■□□□ 1.24
Scn1b-201ENSMUST00000098548 Sbk3P0C5K0 361 aa22.8■■□□□ 1.24
Scn1b-201ENSMUST00000098548 SmoP56726 793 aa22.8■■□□□ 1.24
Scn1b-201ENSMUST00000098548 Gpatch4Q3TFK5 415 aaKnown RBP22.8■■□□□ 1.24
Scn1b-201ENSMUST00000098548 Gm853Q3UNZ2 425 aa22.8■■□□□ 1.24
Scn1b-201ENSMUST00000098548 Atg16l1Q8C0J2 607 aa22.8■■□□□ 1.24
Scn1b-201ENSMUST00000098548 Atat1Q8K341 421 aa22.8■■□□□ 1.24
Scn1b-201ENSMUST00000098548 Appl1Q8K3H0 707 aa22.8■■□□□ 1.24
Scn1b-201ENSMUST00000098548 Znf426Q8R1D1 550 aa22.8■■□□□ 1.24
Scn1b-201ENSMUST00000098548 Tceal1Q921P9 165 aa22.8■■□□□ 1.24
Scn1b-201ENSMUST00000098548 Nudt8Q9CR24 210 aa22.8■■□□□ 1.24
Scn1b-201ENSMUST00000098548 Mpp6Q9JLB0 553 aa22.8■■□□□ 1.24
Scn1b-201ENSMUST00000098548 Sept6Q9R1T4 434 aa22.8■■□□□ 1.24
Scn1b-201ENSMUST00000098548 Dhx35A2ACQ1 703 aaKnown RBP22.79■■□□□ 1.24
Scn1b-201ENSMUST00000098548 Prrg1A2BFE8 218 aa22.79■■□□□ 1.24
Scn1b-201ENSMUST00000098548 Gm7275E9Q1B3 247 aa22.79■■□□□ 1.24
Scn1b-201ENSMUST00000098548 Vmn1r55E9Q8I6 310 aa22.79■■□□□ 1.24
Scn1b-201ENSMUST00000098548 Gm3187M0QWW3 260 aa22.79■■□□□ 1.24
Retrieved 100 of 22,080 RNA–protein pairs in 43.1 ms