RNA–Protein interactions for RNA: ENSMUST00000088653.2

Ccdc87-201, Transcript of Coiled-coil domain-containing protein 87, mousemouse

APPRIS P1 BASIC

Gene Ccdc87, Length 3,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87-201ENSMUST00000088653 Pcna-ps2A0A140T8V5 261 aa10.39□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 4931406B18RikA2RSL7 367 aa10.39□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 Cilp2D3Z7H8 1162 aa10.39□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 PcnaP17918 261 aa10.39□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 Tac1P41539 130 aa10.39□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 Rps24P62849 133 aaKnown RBP10.39□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 Slfn4Q3UV66 602 aa10.39□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 Stxbp5lQ5DQR4 1185 aa10.39□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 Chst10Q6PGK7 356 aa10.39□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 Parp9Q8CAS9 866 aa10.39□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 CopaQ8CIE6 1224 aaKnown RBP10.39□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 Dync1li1Q8R1Q8 523 aa10.39□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 Ilf2Q9CXY6 390 aaKnown RBP10.39□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 Upf1Q9EPU0 1124 aaKnown RBP10.39□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 Cngb3Q9JJZ9 694 aa10.39□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 Pcm1Q9R0L6 2025 aa10.39□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 Mroh7A2AVR2 1279 aa10.39□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 Btnl4A2CG29 586 aa10.39□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 Eif2b3B1AUN2 452 aaKnown RBP10.39□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 Cd151O35566 253 aa10.39□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 Ap3d1O54774 1199 aa10.39□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 Per3O70361 1113 aa10.39□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 Igf2bp1O88477 577 aaKnown RBP10.39□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 Coro1aO89053 461 aa10.39□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 Sp1O89090 784 aa10.39□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 PolP11369 1281 aa10.39□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 Kpnb1P70168 876 aaKnown RBP10.39□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 Eif2ak2Q03963 515 aaKnown RBP10.39□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 Nat9Q3UG98 241 aa10.39□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 Arnt2Q61324 712 aa10.39□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 Itih3Q61704 889 aa10.39□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 PhgdhQ61753 533 aaKnown RBP10.39□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 Kctd12Q6WVG3 327 aa10.39□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 Ostm1Q8BGT0 338 aa10.39□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 Prr11Q8BHE0 368 aa10.39□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 Kansl2Q8BQR4 486 aa10.39□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 TwnkQ8CIW5 685 aa10.39□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 Usp45Q8K387 813 aa10.39□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 Olfr449Q8VGW8 311 aa10.39□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 Pcdhga10Q91XY9 930 aa10.39□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 Nrif1Q923B3 828 aa10.39□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 Clp1Q99LI9 425 aa10.39□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 Hacd2Q9D3B1 254 aa10.39□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 4930513O06RikQ9D549 161 aa10.39□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 Ttll9A2APC3 461 aa10.38□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 Spin2dB1B0R2 236 aa10.38□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 Gm4450E9Q007 373 aa10.38□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 Cyp2w1E9Q816 493 aa10.38□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 Nsmce4aG3XA30 381 aa10.38□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 Cdh16O88338 830 aa10.38□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 CenpcP49452 906 aaKnown RBP10.38□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 Rps3P62908 243 aaKnown RBP10.38□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 G3bp2P97379 482 aaKnown RBP10.38□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 Ccdc127Q3TC33 260 aa10.38□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 Brsk1Q5RJI5 778 aa10.38□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 Hsd3b4Q61767 373 aa10.38□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 Galnt10Q6P9S7 603 aa10.38□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 TdrkhQ80VL1 560 aa10.38□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 Arl5aQ80ZU0 179 aa10.38□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 Galnt5Q8C102 930 aa10.38□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 Olfr695Q8VFM3 315 aa10.38□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 DcxrQ91X52 244 aa10.38□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 TheglQ9DA15 459 aa10.38□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 Cldn19Q9ET38 224 aa10.38□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 B9d1Q9R1S0 204 aa10.38□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 Htatip2Q9Z2G9 242 aa10.38□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 Gm3604A0A087WPN2 559 aa10.38□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 Gm20431E9PY39 371 aa10.38□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 Vmn2r96E9PZU5 664 aa10.38□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 Rad51ap2G3UW63 976 aa10.38□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 Cyp4f17G3UW78 524 aa10.38□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 KlO35082 1014 aa10.38□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 MutP16332 748 aa10.38□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 Man1a1P45700 655 aa10.38□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 UcmaQ14BU0 138 aa10.38□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 Trim71Q1PSW8 855 aaKnown RBP10.38□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 SbplQ3TUY3 232 aa10.38□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 RgnQ64374 299 aa10.38□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 Sel1l3Q80TS8 1137 aa10.38□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 Pnma8aQ80VM8 430 aa10.38□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 B3gnt5Q8BGY6 376 aa10.38□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 SybuQ8BHS8 665 aa10.38□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 Znf689Q8BKK5 500 aa10.38□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 Ago1Q8CJG1 857 aaKnown RBP10.38□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 Acad9Q8JZN5 625 aaKnown RBP10.38□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 Cadm1Q8R5M8 456 aaKnown RBP10.38□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 FtcdQ91XD4 541 aa10.38□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 Cyp4f16Q99N17 524 aa10.38□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 StambpQ9CQ26 424 aa10.38□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 Fam90a1bQ9D4F3 419 aa10.38□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 IgtpQ9DCE9 423 aa10.38□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 Gde1Q9JL56 331 aa10.38□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 Cldn3Q9Z0G9 219 aa10.38□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 Slc8a3S4R2P9 928 aa10.38□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 Ncam2O35136 837 aa10.38□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 TertO70372 1122 aa10.38□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 Il6raP22272 460 aa10.38□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 Mnat1P51949 309 aa10.38□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 Crnkl1P63154 690 aaKnown RBP10.38□□□□□ -0.75
Ccdc87-201ENSMUST00000088653 Ldb1P70662 411 aa10.38□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 55 ms