RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Lrrc42Q8R2U7 421 aa11.92□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Wdr55Q9CX97 388 aa11.92□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Ptpn4Q9WU22 926 aa11.92□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Nup188Q6ZQH8 1759 aa11.92□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Ikzf3O08900 507 aa11.92□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Slc2a3P32037 493 aaKnown RBP11.92□□□□□ -0.5
Pcif1-201ENSMUST00000041643 PnmtP40935 295 aa11.92□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Ampd1Q3V1D3 745 aa11.92□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Tex24Q5DP50 351 aa11.92□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Cyp3a13Q64464 503 aa11.92□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Klhl23Q6GQU2 558 aa11.92□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Colgalt2Q6NVG7 625 aa11.92□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Naif1Q6PFD7 327 aa11.92□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Dpy19l3Q71B07 716 aa11.92□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Ubp1Q811S7 540 aa11.92□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Senp2Q91ZX6 588 aa11.92□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Ly6kQ9CWP4 154 aa11.92□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Q9D454 513 aa11.92□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Scn11aQ9R053 1765 aa11.92□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Gm3259D3YUK0 475 aa11.92□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Dusp8O09112 663 aa11.92□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Itm2bO89051 266 aa11.92□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Gm5431Q5NCB3 844 aa11.92□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Amer2Q8CCJ4 672 aa11.92□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Eva1bQ8K2Y3 164 aa11.92□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Q9CPS8 106 aa11.92□□□□□ -0.5
Pcif1-201ENSMUST00000041643 RhojQ9ER71 214 aa11.92□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Stk11Q9WTK7 436 aa11.92□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Gm14781A2A9Q9 366 aa11.92□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Osbpl8B9EJ86 889 aa11.92□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Fam181aJ3QNB7 292 aa11.92□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Mageb5Q14AN0 366 aa11.92□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Naa11Q3UX61 218 aa11.92□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Glp2rQ5IXF8 512 aa11.92□□□□□ -0.5
Pcif1-201ENSMUST00000041643 PtprjQ64455 1238 aa11.92□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Dalrd3Q6PJN8 538 aa11.92□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Nmur2Q8BZ39 395 aa11.92□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Nipal4Q8BZF2 406 aa11.92□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Ddx52Q8K301 598 aaKnown RBP11.92□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Spats2lQ91WJ7 558 aaKnown RBP11.92□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Tm4sf4Q91XD3 202 aa11.92□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Mgat4dQ9D4R2 373 aa11.92□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Slc25a14Q9Z2B2 325 aa11.92□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Znf518bB2RRE4 1077 aa11.92□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Alas2P08680 587 aa11.92□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Wnt7bP28047 349 aa11.92□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Msh2P43247 935 aaKnown RBP11.92□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Lzts1P60853 599 aa11.92□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Mapkap1Q8BKH7 522 aa11.92□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Phtf2Q8CB19 747 aa11.92□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Abcf3Q8K268 709 aa11.92□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Bbs2Q9CWF6 721 aa11.92□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Gm43518A0A0G2JGB6 165 aa11.91□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Olfr600E9PUN7 314 aa11.91□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Gm8334F7CD45 553 aa11.91□□□□□ -0.5
Pcif1-201ENSMUST00000041643 MrasO08989 208 aa11.91□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Dnajb14Q149L6 379 aa11.91□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Zfp868Q3UTQ6 422 aa11.91□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Cyp3a16Q64481 504 aa11.91□□□□□ -0.5
Pcif1-201ENSMUST00000041643 PtprcapQ64697 197 aa11.91□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Lrrc75bQ7TPD7 306 aa11.91□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Olfr1037Q7TR84 321 aa11.91□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Phf8Q80TJ7 1023 aa11.91□□□□□ -0.5
Pcif1-201ENSMUST00000041643 C2cd2lQ80X80 706 aa11.91□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Zfp418Q8BFS8 652 aa11.91□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Mterf2Q8BKY8 385 aa11.91□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Pdcd2lQ8C5N5 364 aa11.91□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Rnf219Q8K2Y0 722 aa11.91□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Dennd1aQ8K382 1016 aa11.91□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Olfr474Q8VFC9 310 aa11.91□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Grhl1Q921D9 618 aa11.91□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Gprc5bQ923Z0 410 aa11.91□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Znf354bQ9QXT9 601 aa11.91□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Clec4aQ9QZ15 238 aa11.91□□□□□ -0.5
Pcif1-201ENSMUST00000041643 6720489N17RikA0A1Y7VJW0 127 aa11.91□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Ccdc120A2AEV7 629 aa11.91□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Olfr1123A2AT85 323 aa11.91□□□□□ -0.5
Pcif1-201ENSMUST00000041643 MipepA6H611 711 aa11.91□□□□□ -0.5
Pcif1-201ENSMUST00000041643 LtfP08071 707 aa11.91□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Ccnb1P24860 430 aa11.91□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Atp6v1e1P50518 226 aa11.91□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Ldb1P70662 411 aa11.91□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Tff2Q03404 129 aa11.91□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Gm136Q3V037 328 aa11.91□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Ifit3Q64345 403 aa11.91□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Zbtb24Q80X44 710 aa11.91□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Slc25a3Q8VEM8 357 aaKnown RBP11.91□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Rsph1Q8VIG3 301 aa11.91□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Stx11Q9D3G5 287 aa11.91□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Dnajb4Q9D832 337 aa11.91□□□□□ -0.5
Pcif1-201ENSMUST00000041643 AvenQ9D9K3 342 aa11.91□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Slc5a3Q9JKZ2 718 aa11.91□□□□□ -0.5
Pcif1-201ENSMUST00000041643 PrebQ9WUQ2 417 aa11.91□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Gm7792A0A0J9YU01 481 aa11.91□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Gm3183D3YUJ6 481 aa11.91□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Gm3139J3QK78 481 aa11.91□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Gm3106J3QPH3 481 aa11.91□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Ltb4rO88855 351 aa11.91□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Mtnd2P03893 345 aa11.91□□□□□ -0.5
Pcif1-201ENSMUST00000041643 Vgll3P85442 326 aa11.91□□□□□ -0.5
Retrieved 100 of 22,080 RNA–protein pairs in 41.2 ms