RNA–Protein interactions for RNA: ENSMUST00000034131.9

Vps35-201, Transcript of Vacuolar protein sorting-associated protein 35, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vps35, Length 3,474 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35-201ENSMUST00000034131 NepnQ9CQ76 512 aa13.48□□□□□ -0.25
Vps35-201ENSMUST00000034131 Pinx1Q9CZX5 332 aaKnown RBP13.48□□□□□ -0.25
Vps35-201ENSMUST00000034131 Atp5dQ9D3D9 168 aa13.48□□□□□ -0.25
Vps35-201ENSMUST00000034131 Ddi1Q9DAF3 408 aa13.48□□□□□ -0.25
Vps35-201ENSMUST00000034131 Nudt5Q9JKX6 218 aa13.48□□□□□ -0.25
Vps35-201ENSMUST00000034131 Rad9aQ9Z0F6 389 aa13.48□□□□□ -0.25
Vps35-201ENSMUST00000034131 SktA2AQ25 1946 aaKnown RBP13.48□□□□□ -0.25
Vps35-201ENSMUST00000034131 Cdr2lA2A6T1 465 aa13.47□□□□□ -0.25
Vps35-201ENSMUST00000034131 Zfp850J3QPC5 689 aa13.47□□□□□ -0.25
Vps35-201ENSMUST00000034131 Alox8O35936 677 aa13.47□□□□□ -0.25
Vps35-201ENSMUST00000034131 Cd72P21855 354 aa13.47□□□□□ -0.25
Vps35-201ENSMUST00000034131 Ndufs6P52503 116 aa13.47□□□□□ -0.25
Vps35-201ENSMUST00000034131 Copz1P61924 177 aa13.47□□□□□ -0.25
Vps35-201ENSMUST00000034131 Xrra1Q3U3V8 786 aa13.47□□□□□ -0.25
Vps35-201ENSMUST00000034131 Snx25Q3ZT31 840 aa13.47□□□□□ -0.25
Vps35-201ENSMUST00000034131 Atl1Q8BH66 558 aa13.47□□□□□ -0.25
Vps35-201ENSMUST00000034131 Slc41a1Q8BJA2 512 aa13.47□□□□□ -0.25
Vps35-201ENSMUST00000034131 Eme1Q8BJW7 570 aa13.47□□□□□ -0.25
Vps35-201ENSMUST00000034131 Robo4Q8C310 1012 aa13.47□□□□□ -0.25
Vps35-201ENSMUST00000034131 Cant1Q8VCF1 403 aa13.47□□□□□ -0.25
Vps35-201ENSMUST00000034131 Pcdha1Q91Y21 948 aa13.47□□□□□ -0.25
Vps35-201ENSMUST00000034131 Stard13Q923Q2 1113 aa13.47□□□□□ -0.25
Vps35-201ENSMUST00000034131 Mccc1Q99MR8 717 aa13.47□□□□□ -0.25
Vps35-201ENSMUST00000034131 Nipsnap3bQ9CQE1 247 aa13.47□□□□□ -0.25
Vps35-201ENSMUST00000034131 Prl7c1Q9CRB5 251 aa13.47□□□□□ -0.25
Vps35-201ENSMUST00000034131 Tlr6Q9EPW9 795 aa13.47□□□□□ -0.25
Vps35-201ENSMUST00000034131 Myg1Q9JK81 380 aa13.47□□□□□ -0.25
Vps35-201ENSMUST00000034131 Arhgap36B1AUC7 590 aa13.47□□□□□ -0.25
Vps35-201ENSMUST00000034131 Gm17615E9Q9P2 165 aa13.47□□□□□ -0.25
Vps35-201ENSMUST00000034131 Ikzf3O08900 507 aa13.47□□□□□ -0.25
Vps35-201ENSMUST00000034131 Tpst1O70281 370 aa13.47□□□□□ -0.25
Vps35-201ENSMUST00000034131 Gna12P27600 379 aa13.47□□□□□ -0.25
Vps35-201ENSMUST00000034131 Alox5P48999 674 aa13.47□□□□□ -0.25
Vps35-201ENSMUST00000034131 Ccr1P51675 355 aa13.47□□□□□ -0.25
Vps35-201ENSMUST00000034131 YwhaqP68254 245 aaKnown RBP13.47□□□□□ -0.25
Vps35-201ENSMUST00000034131 Ctps2P70303 586 aa13.47□□□□□ -0.25
Vps35-201ENSMUST00000034131 Jmjd8Q3TA59 316 aa13.47□□□□□ -0.25
Vps35-201ENSMUST00000034131 Lrrc8bQ5DU41 803 aa13.47□□□□□ -0.25
Vps35-201ENSMUST00000034131 RasefQ5RI75 627 aa13.47□□□□□ -0.25
Vps35-201ENSMUST00000034131 Trpc1Q61056 793 aa13.47□□□□□ -0.25
Vps35-201ENSMUST00000034131 Camkk2Q8C078 588 aa13.47□□□□□ -0.25
Vps35-201ENSMUST00000034131 Vps26bQ8C0E2 336 aa13.47□□□□□ -0.25
Vps35-201ENSMUST00000034131 Slc45a3Q8K0H7 553 aa13.47□□□□□ -0.25
Vps35-201ENSMUST00000034131 Npm3Q9CPP0 175 aaKnown RBP13.47□□□□□ -0.25
Vps35-201ENSMUST00000034131 Bbs2Q9CWF6 721 aa13.47□□□□□ -0.25
Vps35-201ENSMUST00000034131 LrgukQ9D5S7 820 aa13.47□□□□□ -0.25
Vps35-201ENSMUST00000034131 Q9D5Y0 588 aa13.47□□□□□ -0.25
Vps35-201ENSMUST00000034131 Fam83dQ9D7I8 585 aa13.47□□□□□ -0.25
Vps35-201ENSMUST00000034131 Tbx20Q9ES03 445 aa13.47□□□□□ -0.25
Vps35-201ENSMUST00000034131 Trim39Q9ESN2 488 aa13.47□□□□□ -0.25
Vps35-201ENSMUST00000034131 Myo18aQ9JMH9 2050 aaKnown RBP13.47□□□□□ -0.25
Vps35-201ENSMUST00000034131 Slc6a21A0A1B0GSD2 748 aa13.47□□□□□ -0.25
Vps35-201ENSMUST00000034131 Ttll11A4Q9F4 727 aa13.47□□□□□ -0.25
Vps35-201ENSMUST00000034131 Vmn2r84D3YWE3 849 aa13.47□□□□□ -0.25
Vps35-201ENSMUST00000034131 Map2k3O09110 347 aa13.47□□□□□ -0.25
Vps35-201ENSMUST00000034131 Zw10O54692 779 aa13.47□□□□□ -0.25
Vps35-201ENSMUST00000034131 Aqp1Q02013 269 aa13.47□□□□□ -0.25
Vps35-201ENSMUST00000034131 Treml2Q2LA85 329 aa13.47□□□□□ -0.25
Vps35-201ENSMUST00000034131 Faf2Q3TDN2 445 aa13.47□□□□□ -0.25
Vps35-201ENSMUST00000034131 Gja6Q6S5G4 283 aa13.47□□□□□ -0.25
Vps35-201ENSMUST00000034131 Arhgef33Q8BW86 850 aa13.47□□□□□ -0.25
Vps35-201ENSMUST00000034131 Lamtor4Q8CF66 99 aa13.47□□□□□ -0.25
Vps35-201ENSMUST00000034131 Ebf4Q8K4J2 599 aa13.47□□□□□ -0.25
Vps35-201ENSMUST00000034131 Gtse1Q8R080 741 aa13.47□□□□□ -0.25
Vps35-201ENSMUST00000034131 Utp6Q8VCY6 597 aaKnown RBP13.47□□□□□ -0.25
Vps35-201ENSMUST00000034131 Snrnp25Q8VIK1 123 aa13.47□□□□□ -0.25
Vps35-201ENSMUST00000034131 Lrrc4Q99PH1 652 aa13.47□□□□□ -0.25
Vps35-201ENSMUST00000034131 Q9CPZ3 230 aa13.47□□□□□ -0.25
Vps35-201ENSMUST00000034131 Dnajb4Q9D832 337 aa13.47□□□□□ -0.25
Vps35-201ENSMUST00000034131 Cyp2ab1S4R196 498 aa13.47□□□□□ -0.25
Vps35-201ENSMUST00000034131 Zmynd12A2BGJ5 363 aa13.46□□□□□ -0.25
Vps35-201ENSMUST00000034131 Lcn11A2BHR2 178 aa13.46□□□□□ -0.25
Vps35-201ENSMUST00000034131 4930579F01RikE9Q3L6 325 aa13.46□□□□□ -0.25
Vps35-201ENSMUST00000034131 Gria1P23818 907 aa13.46□□□□□ -0.25
Vps35-201ENSMUST00000034131 Itga11P61622 1188 aa13.46□□□□□ -0.25
Vps35-201ENSMUST00000034131 Macrod2Q3UYG8 475 aa13.46□□□□□ -0.25
Vps35-201ENSMUST00000034131 Olfr325Q5NCD2 326 aa13.46□□□□□ -0.25
Vps35-201ENSMUST00000034131 Gpr65Q61038 337 aa13.46□□□□□ -0.25
Vps35-201ENSMUST00000034131 Cyp2r1Q6VVW9 501 aa13.46□□□□□ -0.25
Vps35-201ENSMUST00000034131 Rps27lQ6ZWY3 84 aaKnown RBP13.46□□□□□ -0.25
Vps35-201ENSMUST00000034131 Il17reQ8BH06 637 aa13.46□□□□□ -0.25
Vps35-201ENSMUST00000034131 Ints10Q8K2A7 710 aaKnown RBP13.46□□□□□ -0.25
Vps35-201ENSMUST00000034131 Ttc39cQ8VE09 580 aa13.46□□□□□ -0.25
Vps35-201ENSMUST00000034131 Rassf3Q99P51 232 aa13.46□□□□□ -0.25
Vps35-201ENSMUST00000034131 Cox16Q9CR63 106 aa13.46□□□□□ -0.25
Vps35-201ENSMUST00000034131 Rfc2Q9WUK4 349 aaKnown RBP13.46□□□□□ -0.25
Vps35-201ENSMUST00000034131 Gm6408J3QNG1 320 aa13.46□□□□□ -0.26
Vps35-201ENSMUST00000034131 Gm3402K7N5P2 326 aa13.46□□□□□ -0.26
Vps35-201ENSMUST00000034131 Gp5O08742 567 aa13.46□□□□□ -0.26
Vps35-201ENSMUST00000034131 Ccdc153P0C7Q1 202 aa13.46□□□□□ -0.26
Vps35-201ENSMUST00000034131 Hspa1bP17879 642 aaKnown RBP13.46□□□□□ -0.26
Vps35-201ENSMUST00000034131 CtshP49935 333 aa13.46□□□□□ -0.26
Vps35-201ENSMUST00000034131 Grm1P97772 1199 aa13.46□□□□□ -0.26
Vps35-201ENSMUST00000034131 InhbbQ04999 411 aa13.46□□□□□ -0.26
Vps35-201ENSMUST00000034131 Mrm3Q5ND52 418 aa13.46□□□□□ -0.26
Vps35-201ENSMUST00000034131 FAM120AQ6A0A9 1112 aaKnown RBP13.46□□□□□ -0.26
Vps35-201ENSMUST00000034131 Tlr12Q6QNU9 906 aa13.46□□□□□ -0.26
Vps35-201ENSMUST00000034131 Rsbn1Q80T69 795 aa13.46□□□□□ -0.26
Vps35-201ENSMUST00000034131 Phf24Q80TL4 400 aa13.46□□□□□ -0.26
Vps35-201ENSMUST00000034131 Gabra5Q8BHJ7 463 aa13.46□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 28.1 ms