RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 E330034G19RikQ3UWX6 351 aa14.79□□□□□ -0.04
Ercc1-201ENSMUST00000003645 Garnl3Q3V0G7 1038 aa14.79□□□□□ -0.04
Ercc1-201ENSMUST00000003645 Tbc1d1Q60949 1255 aa14.79□□□□□ -0.04
Ercc1-201ENSMUST00000003645 PtprrQ62132 656 aa14.79□□□□□ -0.04
Ercc1-201ENSMUST00000003645 Tpp2Q64514 1262 aa14.79□□□□□ -0.04
Ercc1-201ENSMUST00000003645 Gm5414Q6IFZ8 552 aa14.79□□□□□ -0.04
Ercc1-201ENSMUST00000003645 Nudcd1Q6PIP5 582 aa14.79□□□□□ -0.04
Ercc1-201ENSMUST00000003645 Wnk4Q80UE6 1222 aa14.79□□□□□ -0.04
Ercc1-201ENSMUST00000003645 Zfp454Q80Y34 536 aa14.79□□□□□ -0.04
Ercc1-201ENSMUST00000003645 NfascQ810U3 1240 aa14.79□□□□□ -0.04
Ercc1-201ENSMUST00000003645 Pcid2Q8BFV2 399 aaKnown RBP14.79□□□□□ -0.04
Ercc1-201ENSMUST00000003645 Dtd2Q8BHA3 168 aa14.79□□□□□ -0.04
Ercc1-201ENSMUST00000003645 Kiaa1671Q8BRV5 308 aa14.79□□□□□ -0.04
Ercc1-201ENSMUST00000003645 CcinQ8CDE2 588 aa14.79□□□□□ -0.04
Ercc1-201ENSMUST00000003645 Cfap61Q8CEL2 1252 aa14.79□□□□□ -0.04
Ercc1-201ENSMUST00000003645 Lsm14bQ8CGC4 385 aaKnown RBP14.79□□□□□ -0.04
Ercc1-201ENSMUST00000003645 GcshQ91WK5 170 aa14.79□□□□□ -0.04
Ercc1-201ENSMUST00000003645 TmlheQ91ZE0 421 aa14.79□□□□□ -0.04
Ercc1-201ENSMUST00000003645 Tspan1Q99J59 240 aa14.79□□□□□ -0.04
Ercc1-201ENSMUST00000003645 Sec13Q9D1M0 322 aa14.79□□□□□ -0.04
Ercc1-201ENSMUST00000003645 Tchhl1Q9D3P1 638 aa14.79□□□□□ -0.04
Ercc1-201ENSMUST00000003645 Dydc1Q9D9T0 175 aa14.79□□□□□ -0.04
Ercc1-201ENSMUST00000003645 Tacc3Q9JJ11 631 aa14.79□□□□□ -0.04
Ercc1-201ENSMUST00000003645 Cbx8Q9QXV1 362 aa14.79□□□□□ -0.04
Ercc1-201ENSMUST00000003645 Sept6Q9R1T4 434 aa14.79□□□□□ -0.04
Ercc1-201ENSMUST00000003645 RecqlQ9Z129 648 aa14.79□□□□□ -0.04
Ercc1-201ENSMUST00000003645 Klhl32A2AJX0 620 aa14.78□□□□□ -0.04
Ercc1-201ENSMUST00000003645 Ttc30a2A2AKQ8 664 aa14.78□□□□□ -0.04
Ercc1-201ENSMUST00000003645 Mgat4eA6H684 439 aa14.78□□□□□ -0.04
Ercc1-201ENSMUST00000003645 Vwa5b1A9Z1V5 1215 aa14.78□□□□□ -0.04
Ercc1-201ENSMUST00000003645 Glyatl3E9Q5L8 290 aa14.78□□□□□ -0.04
Ercc1-201ENSMUST00000003645 Gm4847G3X946 537 aa14.78□□□□□ -0.04
Ercc1-201ENSMUST00000003645 Gm7942L7N277 499 aa14.78□□□□□ -0.04
Ercc1-201ENSMUST00000003645 Dusp8O09112 663 aa14.78□□□□□ -0.04
Ercc1-201ENSMUST00000003645 Sult3a1O35403 293 aa14.78□□□□□ -0.04
Ercc1-201ENSMUST00000003645 Ifnar2O35664 513 aa14.78□□□□□ -0.04
Ercc1-201ENSMUST00000003645 HcrtO55241 130 aa14.78□□□□□ -0.04
Ercc1-201ENSMUST00000003645 Cxcr3O88410 367 aa14.78□□□□□ -0.04
Ercc1-201ENSMUST00000003645 Zp3P10761 424 aa14.78□□□□□ -0.04
Ercc1-201ENSMUST00000003645 Sstr1P30873 391 aa14.78□□□□□ -0.04
Ercc1-201ENSMUST00000003645 Eif2ak2Q03963 515 aaKnown RBP14.78□□□□□ -0.04
Ercc1-201ENSMUST00000003645 Sult1d1Q3UZZ6 295 aa14.78□□□□□ -0.04
Ercc1-201ENSMUST00000003645 Gm11492Q5ND19 536 aa14.78□□□□□ -0.04
Ercc1-201ENSMUST00000003645 Heatr9Q5QNV8 569 aa14.78□□□□□ -0.04
Ercc1-201ENSMUST00000003645 PfplQ5RKV8 702 aa14.78□□□□□ -0.04
Ercc1-201ENSMUST00000003645 Nuak1Q641K5 658 aa14.78□□□□□ -0.04
Ercc1-201ENSMUST00000003645 Pced1aQ6P1Z5 449 aa14.78□□□□□ -0.04
Ercc1-201ENSMUST00000003645 Zfp759Q7M6X3 721 aa14.78□□□□□ -0.04
Ercc1-201ENSMUST00000003645 InavaQ7TN12 663 aa14.78□□□□□ -0.04
Ercc1-201ENSMUST00000003645 Zbtb42Q811H0 420 aa14.78□□□□□ -0.04
Ercc1-201ENSMUST00000003645 Zfp449Q8CB76 518 aa14.78□□□□□ -0.04
Ercc1-201ENSMUST00000003645 Acad10Q8K370 1069 aa14.78□□□□□ -0.04
Ercc1-201ENSMUST00000003645 Mat1aQ91X83 396 aaKnown RBP14.78□□□□□ -0.04
Ercc1-201ENSMUST00000003645 Osbpl1aQ91XL9 950 aa14.78□□□□□ -0.04
Ercc1-201ENSMUST00000003645 Msi2Q920Q6 346 aaKnown RBP14.78□□□□□ -0.04
Ercc1-201ENSMUST00000003645 Smc6Q924W5 1097 aa14.78□□□□□ -0.04
Ercc1-201ENSMUST00000003645 Ttc30a1Q99J38 664 aa14.78□□□□□ -0.04
Ercc1-201ENSMUST00000003645 Ddx47Q9CWX9 455 aaKnown RBP14.78□□□□□ -0.04
Ercc1-201ENSMUST00000003645 Ttc30bQ9CY00 664 aa14.78□□□□□ -0.04
Ercc1-201ENSMUST00000003645 Zfp773Q9CZ29 471 aa14.78□□□□□ -0.04
Ercc1-201ENSMUST00000003645 Prpsap1Q9D0M1 356 aa14.78□□□□□ -0.04
Ercc1-201ENSMUST00000003645 Senp8Q9D2Z4 221 aa14.78□□□□□ -0.04
Ercc1-201ENSMUST00000003645 Ccdc124Q9D8X2 217 aaKnown RBP14.78□□□□□ -0.04
Ercc1-201ENSMUST00000003645 Smok2bQ9QYZ3 484 aa14.78□□□□□ -0.04
Ercc1-201ENSMUST00000003645 Smok2aQ9QYZ6 504 aa14.78□□□□□ -0.04
Ercc1-201ENSMUST00000003645 Gria4Q9Z2W8 902 aa14.78□□□□□ -0.04
Ercc1-201ENSMUST00000003645 Gm29133A0A1B0GT72 266 aa14.77□□□□□ -0.04
Ercc1-201ENSMUST00000003645 Armt1A6H630 439 aa14.77□□□□□ -0.04
Ercc1-201ENSMUST00000003645 Iqca1lA6H690 825 aa14.77□□□□□ -0.04
Ercc1-201ENSMUST00000003645 Ldb2O55203 373 aa14.77□□□□□ -0.04
Ercc1-201ENSMUST00000003645 ChadO55226 358 aa14.77□□□□□ -0.04
Ercc1-201ENSMUST00000003645 Hoxa4P06798 285 aa14.77□□□□□ -0.04
Ercc1-201ENSMUST00000003645 Mdga1Q0PMG2 940 aa14.77□□□□□ -0.04
Ercc1-201ENSMUST00000003645 Fam83fQ3UKU4 495 aa14.77□□□□□ -0.04
Ercc1-201ENSMUST00000003645 Brsk1Q5RJI5 778 aa14.77□□□□□ -0.04
Ercc1-201ENSMUST00000003645 Elavl3Q60900 367 aaKnown RBP14.77□□□□□ -0.04
Ercc1-201ENSMUST00000003645 Krt42Q6IFX2 452 aa14.77□□□□□ -0.04
Ercc1-201ENSMUST00000003645 Heatr6Q6P1G0 1184 aaKnown RBP14.77□□□□□ -0.04
Ercc1-201ENSMUST00000003645 Fam120bQ6RI63 786 aa14.77□□□□□ -0.04
Ercc1-201ENSMUST00000003645 TifaQ793I8 184 aa14.77□□□□□ -0.04
Ercc1-201ENSMUST00000003645 Lrrc27Q80YS5 523 aa14.77□□□□□ -0.04
Ercc1-201ENSMUST00000003645 SgtaQ8BJU0 315 aa14.77□□□□□ -0.04
Ercc1-201ENSMUST00000003645 Washc5Q8C2E7 1159 aaKnown RBP14.77□□□□□ -0.04
Ercc1-201ENSMUST00000003645 Pex5lQ8C437 567 aa14.77□□□□□ -0.04
Ercc1-201ENSMUST00000003645 CherpQ8CGZ0 936 aaKnown RBP14.77□□□□□ -0.04
Ercc1-201ENSMUST00000003645 Hacd3Q8K2C9 362 aa14.77□□□□□ -0.04
Ercc1-201ENSMUST00000003645 Eva1bQ8K2Y3 164 aa14.77□□□□□ -0.04
Ercc1-201ENSMUST00000003645 RabepkQ8VCH5 380 aa14.77□□□□□ -0.04
Ercc1-201ENSMUST00000003645 Zdhhc5Q8VDZ4 715 aa14.77□□□□□ -0.04
Ercc1-201ENSMUST00000003645 VitQ8VHI5 650 aa14.77□□□□□ -0.04
Ercc1-201ENSMUST00000003645 Cyp2c70Q91W64 489 aa14.77□□□□□ -0.04
Ercc1-201ENSMUST00000003645 Dok4Q99KE3 325 aa14.77□□□□□ -0.04
Ercc1-201ENSMUST00000003645 LiasQ99M04 373 aa14.77□□□□□ -0.04
Ercc1-201ENSMUST00000003645 Get4Q9D1H7 327 aa14.77□□□□□ -0.04
Ercc1-201ENSMUST00000003645 Cdyl2Q9D5D8 503 aa14.77□□□□□ -0.04
Ercc1-201ENSMUST00000003645 Pgam1Q9DBJ1 254 aa14.77□□□□□ -0.04
Ercc1-201ENSMUST00000003645 XkQ9QXY7 446 aa14.77□□□□□ -0.04
Ercc1-201ENSMUST00000003645 Zfp846G3X996 541 aa14.76□□□□□ -0.05
Ercc1-201ENSMUST00000003645 Cyp2b19O55071 492 aa14.76□□□□□ -0.05
Ercc1-201ENSMUST00000003645 P01679 107 aa14.76□□□□□ -0.05
Retrieved 100 of 22,080 RNA–protein pairs in 43.3 ms