RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 VAT1Q99536 393 aa9.52□□□□□ -0.89
PHGDH-228ENST00000641847 RHOXF2Q9BQY4 288 aa9.52□□□□□ -0.89
PHGDH-228ENST00000641847 CIPCQ9C0C6 399 aa9.52□□□□□ -0.89
PHGDH-228ENST00000641847 PRORYQ9H606 182 aa9.52□□□□□ -0.89
PHGDH-228ENST00000641847 RBM22Q9NW64 420 aaKnown RBP eCLIP9.52□□□□□ -0.89
PHGDH-228ENST00000641847 PAK5Q9P286 719 aa9.52□□□□□ -0.89
PHGDH-228ENST00000641847 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.52□□□□□ -0.89
PHGDH-228ENST00000641847 SEPT3Q9UH03 358 aa9.52□□□□□ -0.89
PHGDH-228ENST00000641847 ASIC3Q9UHC3 531 aa9.52□□□□□ -0.89
PHGDH-228ENST00000641847 SLC25A13Q9UJS0 675 aa9.52□□□□□ -0.89
PHGDH-228ENST00000641847 NEU2Q9Y3R4 380 aa9.52□□□□□ -0.89
PHGDH-228ENST00000641847 TTLL3Q9Y4R7 772 aa9.52□□□□□ -0.89
PHGDH-228ENST00000641847 ACTL7AQ9Y615 435 aa9.52□□□□□ -0.89
PHGDH-228ENST00000641847 V9GYY5 206 aaPredicted RBP9.52□□□□□ -0.89
PHGDH-228ENST00000641847 GOLGA8CPA6NN73 597 aa9.51□□□□□ -0.89
PHGDH-228ENST00000641847 F5H423 210 aaPredicted RBP9.51□□□□□ -0.89
PHGDH-228ENST00000641847 FLRT2O43155 660 aa9.51□□□□□ -0.89
PHGDH-228ENST00000641847 CBFA2T3O75081 653 aa9.51□□□□□ -0.89
PHGDH-228ENST00000641847 TMCC1O94876 653 aa9.51□□□□□ -0.89
PHGDH-228ENST00000641847 ASLP04424 464 aa9.51□□□□□ -0.89
PHGDH-228ENST00000641847 ZNF883P0CG24 379 aa9.51□□□□□ -0.89
PHGDH-228ENST00000641847 HNRNPLP14866 589 aaKnown RBP eCLIP9.51□□□□□ -0.89
PHGDH-228ENST00000641847 NFKB1P19838 968 aa9.51□□□□□ -0.89
PHGDH-228ENST00000641847 RPL22P35268 128 aaKnown RBP9.51□□□□□ -0.89
PHGDH-228ENST00000641847 ACTN2P35609 894 aa9.51□□□□□ -0.89
PHGDH-228ENST00000641847 MMP13P45452 471 aa9.51□□□□□ -0.89
PHGDH-228ENST00000641847 STK19P49842 368 aaPredicted RBP9.51□□□□□ -0.89
PHGDH-228ENST00000641847 SERPINH1P50454 418 aaKnown RBP9.51□□□□□ -0.89
PHGDH-228ENST00000641847 RENBPP51606 427 aa9.51□□□□□ -0.89
PHGDH-228ENST00000641847 SLC7A5Q01650 507 aa9.51□□□□□ -0.89
PHGDH-228ENST00000641847 SLC10A7Q0GE19 358 aa9.51□□□□□ -0.89
PHGDH-228ENST00000641847 GRIK2Q13002 908 aa9.51□□□□□ -0.89
PHGDH-228ENST00000641847 GPS1Q13098 491 aa9.51□□□□□ -0.89
PHGDH-228ENST00000641847 EIF4HQ15056 248 aaKnown RBP9.51□□□□□ -0.89
PHGDH-228ENST00000641847 GLE1Q53GS7 698 aaKnown RBP9.51□□□□□ -0.89
PHGDH-228ENST00000641847 TAF1BQ53T94 588 aaPredicted RBP9.51□□□□□ -0.89
PHGDH-228ENST00000641847 ANKRD20A2Q5SQ80 823 aa9.51□□□□□ -0.89
PHGDH-228ENST00000641847 ANKRD20A1Q5TYW2 823 aa9.51□□□□□ -0.89
PHGDH-228ENST00000641847 MARC1Q5VT66 337 aa9.51□□□□□ -0.89
PHGDH-228ENST00000641847 ANKRD20A3Q5VUR7 823 aa9.51□□□□□ -0.89
PHGDH-228ENST00000641847 ITPRIPL1Q6GPH6 555 aa9.51□□□□□ -0.89
PHGDH-228ENST00000641847 BBS5Q8N3I7 341 aa9.51□□□□□ -0.89
PHGDH-228ENST00000641847 TAB3Q8N5C8 712 aaPredicted RBP9.51□□□□□ -0.89
PHGDH-228ENST00000641847 TEX26Q8N6G2 289 aa9.51□□□□□ -0.89
PHGDH-228ENST00000641847 CYB5D2Q8WUJ1 264 aa9.51□□□□□ -0.89
PHGDH-228ENST00000641847 CASKIN2Q8WXE0 1202 aa9.51□□□□□ -0.89
PHGDH-228ENST00000641847 SORCS1Q8WY21 1168 aa9.51□□□□□ -0.89
PHGDH-228ENST00000641847 UBXN4Q92575 508 aa9.51□□□□□ -0.89
PHGDH-228ENST00000641847 TTC17Q96AE7 1141 aa9.51□□□□□ -0.89
PHGDH-228ENST00000641847 TEKT5Q96M29 485 aa9.51□□□□□ -0.89
PHGDH-228ENST00000641847 AGAP3Q96P47 875 aa9.51□□□□□ -0.89
PHGDH-228ENST00000641847 IL12RB2Q99665 862 aa9.51□□□□□ -0.89
PHGDH-228ENST00000641847 TRIM31Q9BZY9 425 aa9.51□□□□□ -0.89
PHGDH-228ENST00000641847 RAB17Q9H0T7 212 aa9.51□□□□□ -0.89
PHGDH-228ENST00000641847 NT5MQ9NPB1 228 aa9.51□□□□□ -0.89
PHGDH-228ENST00000641847 RSPH14Q9UHP6 348 aa9.51□□□□□ -0.89
PHGDH-228ENST00000641847 TRHDEQ9UKU6 1024 aa9.51□□□□□ -0.89
PHGDH-228ENST00000641847 HS3ST2Q9Y278 367 aa9.51□□□□□ -0.89
PHGDH-228ENST00000641847 FCF1Q9Y324 198 aaKnown RBP9.51□□□□□ -0.89
PHGDH-228ENST00000641847 CXorf51AA0A1B0GTR3 108 aa9.5□□□□□ -0.89
PHGDH-228ENST00000641847 A0A1B0GTW7 788 aa9.5□□□□□ -0.89
PHGDH-228ENST00000641847 TBC1D3BA6NDS4 549 aa9.5□□□□□ -0.89
PHGDH-228ENST00000641847 MEI4A8MW99 385 aa9.5□□□□□ -0.89
PHGDH-228ENST00000641847 PRRT4C9JH25 899 aa9.5□□□□□ -0.89
PHGDH-228ENST00000641847 K7ERQ8 282 aa9.5□□□□□ -0.89
PHGDH-228ENST00000641847 CD160O95971 181 aa9.5□□□□□ -0.89
PHGDH-228ENST00000641847 MT-CO1P00395 513 aa9.5□□□□□ -0.89
PHGDH-228ENST00000641847 ATP5BP06576 529 aaKnown RBP9.5□□□□□ -0.89
PHGDH-228ENST00000641847 DLDP09622 509 aaKnown RBP9.5□□□□□ -0.89
PHGDH-228ENST00000641847 SRCP12931 536 aa9.5□□□□□ -0.89
PHGDH-228ENST00000641847 HOXB2P14652 356 aa9.5□□□□□ -0.89
PHGDH-228ENST00000641847 PSMB4P28070 264 aa9.5□□□□□ -0.89
PHGDH-228ENST00000641847 CD68P34810 354 aaPredicted RBP9.5□□□□□ -0.89
PHGDH-228ENST00000641847 HNF1BP35680 557 aa9.5□□□□□ -0.89
PHGDH-228ENST00000641847 TERF1P54274 439 aa9.5□□□□□ -0.89
PHGDH-228ENST00000641847 MAXP61244 160 aa9.5□□□□□ -0.89
PHGDH-228ENST00000641847 RHOAP61586 193 aa9.5□□□□□ -0.89
PHGDH-228ENST00000641847 TUBB4BP68371 445 aa9.5□□□□□ -0.89
PHGDH-228ENST00000641847 ECT2LQ008S8 904 aa9.5□□□□□ -0.89
PHGDH-228ENST00000641847 GUCY2DQ02846 1103 aa9.5□□□□□ -0.89
PHGDH-228ENST00000641847 ITKQ08881 620 aa9.5□□□□□ -0.89
PHGDH-228ENST00000641847 CYTH1Q15438 398 aa9.5□□□□□ -0.89
PHGDH-228ENST00000641847 TEX44Q53QW1 395 aa9.5□□□□□ -0.89
PHGDH-228ENST00000641847 INO80DQ53TQ3 878 aaPredicted RBP9.5□□□□□ -0.89
PHGDH-228ENST00000641847 FAXCQ5TGI0 409 aa9.5□□□□□ -0.89
PHGDH-228ENST00000641847 PID1Q7Z2X4 250 aa9.5□□□□□ -0.89
PHGDH-228ENST00000641847 METTL3Q86U44 580 aaKnown RBP9.5□□□□□ -0.89
PHGDH-228ENST00000641847 SFTPA1Q8IWL2 248 aa9.5□□□□□ -0.89
PHGDH-228ENST00000641847 PGBD5Q8N414 524 aa9.5□□□□□ -0.89
PHGDH-228ENST00000641847 SH2D3CQ8N5H7 860 aa9.5□□□□□ -0.89
PHGDH-228ENST00000641847 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.5□□□□□ -0.89
PHGDH-228ENST00000641847 CNTD1Q8N815 330 aa9.5□□□□□ -0.89
PHGDH-228ENST00000641847 ATP11CQ8NB49 1132 aa9.5□□□□□ -0.89
PHGDH-228ENST00000641847 UCMAQ8WVF2 138 aa9.5□□□□□ -0.89
PHGDH-228ENST00000641847 EXOC2Q96KP1 924 aa9.5□□□□□ -0.89
PHGDH-228ENST00000641847 RPL10LQ96L21 214 aaKnown RBP9.5□□□□□ -0.89
PHGDH-228ENST00000641847 MRGPRX3Q96LB0 322 aa9.5□□□□□ -0.89
PHGDH-228ENST00000641847 PSKH2Q96QS6 385 aa9.5□□□□□ -0.89
PHGDH-228ENST00000641847 ERP44Q9BS26 406 aa9.5□□□□□ -0.89
PHGDH-228ENST00000641847 POLR1EQ9GZS1 481 aaKnown RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms